RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 TSKSQ9UJT2 592 aa22.73■■□□□ 1.23
VCPKMT-203ENST00000484763 FRMD3A2A2Y4 597 aa22.72■■□□□ 1.23
VCPKMT-203ENST00000484763 TBCAO75347 108 aaKnown RBP22.72■■□□□ 1.23
VCPKMT-203ENST00000484763 GUCY2CP25092 1073 aa22.72■■□□□ 1.23
VCPKMT-203ENST00000484763 PRMT2P55345 433 aa22.72■■□□□ 1.23
VCPKMT-203ENST00000484763 COASYQ13057 564 aa22.72■■□□□ 1.23
VCPKMT-203ENST00000484763 TRIM50Q86XT4 487 aa22.72■■□□□ 1.23
VCPKMT-203ENST00000484763 TRPV1Q8NER1 839 aa22.72■■□□□ 1.23
VCPKMT-203ENST00000484763 CEP170P1Q96L14 293 aa22.72■■□□□ 1.23
VCPKMT-203ENST00000484763 Q9Y3F1 56 aa22.72■■□□□ 1.23
VCPKMT-203ENST00000484763 ADCY3O60266 1144 aa22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 LGALS2P05162 132 aa22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 MMP3P08254 477 aa22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 HOXD8P13378 290 aaPredicted RBP22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 ELNP15502 786 aa22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 NPEPPSP55786 919 aa22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 EHHADHQ08426 723 aa22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 RNF214Q8ND24 703 aa22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 NRBP2Q9NSY0 501 aa22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 WBP1LQ9NX94 342 aa22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 ODF2LQ9ULJ1 636 aa22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 DYNC1LI2O43237 492 aaPredicted RBP22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 USO1O60763 962 aaKnown RBP22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 PPFIA4O75335 1185 aa22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 HMGCRP04035 888 aa22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 PSMD2Q13200 908 aa22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 PXYLP1Q8TE99 480 aa22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 LENG1Q96BZ8 264 aaPredicted RBP22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 BPIFA3Q9BQP9 254 aa22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 SH2D3AQ9BRG2 576 aa22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 TIPINQ9BVW5 301 aa22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 CYP26B1Q9NR63 512 aa22.71■■□□□ 1.23
VCPKMT-203ENST00000484763 MYH11P35749 1972 aa22.7■■□□□ 1.23
VCPKMT-203ENST00000484763 CACNB2Q08289 660 aaPredicted RBP22.7■■□□□ 1.22
VCPKMT-203ENST00000484763 DGKDQ16760 1214 aa22.7■■□□□ 1.22
VCPKMT-203ENST00000484763 SMYD4Q8IYR2 804 aaPredicted RBP22.7■■□□□ 1.22
VCPKMT-203ENST00000484763 BBXQ8WY36 941 aaPredicted RBP22.7■■□□□ 1.22
VCPKMT-203ENST00000484763 NIFKQ9BYG3 293 aaKnown RBP22.7■■□□□ 1.22
VCPKMT-203ENST00000484763 CBX8Q9HC52 389 aa22.7■■□□□ 1.22
VCPKMT-203ENST00000484763 ERAP1Q9NZ08 941 aa22.7■■□□□ 1.22
VCPKMT-203ENST00000484763 GDAQ9Y2T3 454 aa22.7■■□□□ 1.22
VCPKMT-203ENST00000484763 COL4A3BPQ9Y5P4 624 aa22.7■■□□□ 1.22
VCPKMT-203ENST00000484763 PRKAR2AP13861 404 aaKnown RBP22.69■■□□□ 1.22
VCPKMT-203ENST00000484763 TRIM32Q13049 653 aa22.69■■□□□ 1.22
VCPKMT-203ENST00000484763 CT47A1Q5JQC4 288 aaPredicted RBP22.69■■□□□ 1.22
VCPKMT-203ENST00000484763 ATP8B4Q8TF62 1192 aa22.69■■□□□ 1.22
VCPKMT-203ENST00000484763 AP5M1Q9H0R1 490 aa22.69■■□□□ 1.22
VCPKMT-203ENST00000484763 ZHX3Q9H4I2 956 aa22.69■■□□□ 1.22
VCPKMT-203ENST00000484763 A6NJR5 290 aa22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 DGAT1O75907 488 aa22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 FAM13AO94988 1023 aa22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 GAP43P17677 238 aa22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 MARK3P27448 753 aa22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 STK4Q13043 487 aa22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 MTERF2Q49AM1 385 aa22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 HERC4Q5GLZ8 1057 aaPredicted RBP22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 FAM26FQ5R3K3 315 aa22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 ZNF215Q9UL58 517 aaPredicted RBP22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 PPME1Q9Y570 386 aa22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 RSPH10B2B2RC85 870 aa22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 SEPT4O43236 478 aa22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 DUSP11O75319 330 aaKnown RBP22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 RSPH10BP0C881 870 aa22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 CPT1AP50416 773 aa22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 PLCB4Q15147 1175 aa22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 HPS3Q969F9 1004 aa22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 GRPEL1Q9HAV7 217 aa22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 PARVGQ9HBI0 331 aa22.68■■□□□ 1.22
VCPKMT-203ENST00000484763 HIP1RO75146 1068 aa22.67■■□□□ 1.22
VCPKMT-203ENST00000484763 ZNF286BP0CG31 522 aa22.67■■□□□ 1.22
VCPKMT-203ENST00000484763 CD44P16070 742 aaKnown RBP22.67■■□□□ 1.22
VCPKMT-203ENST00000484763 CNGA1P29973 690 aa22.67■■□□□ 1.22
VCPKMT-203ENST00000484763 ZNF131P52739 623 aa22.67■■□□□ 1.22
VCPKMT-203ENST00000484763 STIM1Q13586 685 aa22.67■■□□□ 1.22
VCPKMT-203ENST00000484763 BRDTQ58F21 947 aaPredicted RBP22.67■■□□□ 1.22
VCPKMT-203ENST00000484763 DNAJC5GQ8N7S2 189 aa22.67■■□□□ 1.22
VCPKMT-203ENST00000484763 KIAA0895Q8NCT3 520 aa22.67■■□□□ 1.22
VCPKMT-203ENST00000484763 SLAIN1Q8ND83 568 aa22.67■■□□□ 1.22
VCPKMT-203ENST00000484763 SLC39A2Q9NP94 309 aa22.67■■□□□ 1.22
VCPKMT-203ENST00000484763 TRIM17Q9Y577 477 aa22.67■■□□□ 1.22
VCPKMT-203ENST00000484763 PPP1R3GB7ZBB8 358 aa22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 PPP1R2P41236 205 aa22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 COBLL1Q53SF7 1204 aa22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 LUZP1Q86V48 1076 aa22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 SFR1Q86XK3 245 aa22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 MCPH1Q8NEM0 835 aa22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 DRC1Q96MC2 740 aa22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 C16orf70Q9BSU1 422 aa22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 ATP6V0A4Q9HBG4 840 aa22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 SEL1LQ9UBV2 794 aa22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 TRPC6Q9Y210 931 aa22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 ERCC5P28715 1186 aaPredicted RBP22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 PRCPP42785 496 aa22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 MAPK7Q13164 816 aa22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 IQCB1Q15051 598 aa22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 TARBP2Q15633 366 aaKnown RBP22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 MAP3K21Q5TCX8 1036 aa22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 ADSSL1Q8N142 457 aa22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 PCDHA2Q9Y5H9 948 aa22.66■■□□□ 1.22
VCPKMT-203ENST00000484763 BECN2A8MW95 431 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms