RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 KLK7P49862 253 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 CASP5P51878 434 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 SNRPFP62306 86 aaKnown RBP13.11□□□□□ -0.31
SND1-210ENST00000483503 TUBB4BP68371 445 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 PPATQ06203 517 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 VGLL4Q14135 290 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 SPA17Q15506 151 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 PDXDC1Q6P996 788 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.11□□□□□ -0.31
SND1-210ENST00000483503 OTUD6AQ7L8S5 288 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 ACRBPQ8NEB7 543 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 MNS1Q8NEH6 495 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 DNERQ8NFT8 737 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 ZFP91Q96JP5 570 aaPredicted RBP13.11□□□□□ -0.31
SND1-210ENST00000483503 DRC1Q96MC2 740 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 CHP1Q99653 195 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 MOV10L1Q9BXT6 1211 aaKnown RBP13.11□□□□□ -0.31
SND1-210ENST00000483503 TMEM206Q9H813 350 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 NHEJ1Q9H9Q4 299 aaPredicted RBP13.11□□□□□ -0.31
SND1-210ENST00000483503 FAM207AQ9NSI2 230 aaPredicted RBP13.11□□□□□ -0.31
SND1-210ENST00000483503 CYP39A1Q9NYL5 469 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 PKD2L1Q9P0L9 805 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 DAAM1Q9Y4D1 1078 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 CTAGE9A4FU28 777 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 USO1O60763 962 aaKnown RBP13.1□□□□□ -0.31
SND1-210ENST00000483503 NMT1P30419 496 aaKnown RBP13.1□□□□□ -0.31
SND1-210ENST00000483503 YWHABP31946 246 aaKnown RBP13.1□□□□□ -0.31
SND1-210ENST00000483503 HOXD13P35453 343 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 RARRES1P49788 294 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 KCNH2Q12809 1159 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 PLS1Q14651 629 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 KIAA1328Q86T90 577 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 ERO1BQ86YB8 467 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 SLC9A9Q8IVB4 645 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 ZNF784Q8NCA9 323 aaPredicted RBP13.1□□□□□ -0.31
SND1-210ENST00000483503 ANKRD7Q92527 254 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 ATP6V0A1Q93050 837 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 WNK4Q96J92 1243 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 L3MBTL3Q96JM7 780 aaPredicted RBP13.1□□□□□ -0.31
SND1-210ENST00000483503 ACCSQ96QU6 501 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 LSM14BQ9BX40 385 aaKnown RBP13.1□□□□□ -0.31
SND1-210ENST00000483503 GBP3Q9H0R5 595 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 LUC7LQ9NQ29 371 aaKnown RBP13.1□□□□□ -0.31
SND1-210ENST00000483503 PLCB1Q9NQ66 1216 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 WRAP73Q9P2S5 460 aaPredicted RBP13.1□□□□□ -0.31
SND1-210ENST00000483503 KCNG1Q9UIX4 513 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 ZNF215Q9UL58 517 aaPredicted RBP13.1□□□□□ -0.31
SND1-210ENST00000483503 MYO6Q9UM54 1294 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 FRMD4BQ9Y2L6 1034 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 RIPK3Q9Y572 518 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 PCDHA10Q9Y5I2 948 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 ASTN1O14525 1302 aa13.1□□□□□ -0.31
SND1-210ENST00000483503 COL11A1P12107 1806 aaPredicted RBP13.09□□□□□ -0.31
SND1-210ENST00000483503 SSU72P8A0A1W2PR75 194 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 GTPBP10A4D1E9 387 aaKnown RBP13.09□□□□□ -0.31
SND1-210ENST00000483503 PSAPP07602 524 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 PLS3P13797 630 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 ABCD1P33897 745 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 PRKG1Q13976 671 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 STXBP2Q15833 593 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 ZNF569Q5MCW4 686 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 SFMBT2Q5VUG0 894 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 C9orf131Q5VYM1 1079 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 LBX2Q6XYB7 198 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 RRAGAQ7L523 313 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 RIOX2Q8IUF8 465 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 FMNL3Q8IVF7 1028 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 FAM186BQ8IYM0 893 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 ANKRD13AQ8IZ07 590 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 SYCP3Q8IZU3 236 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 SMCR8Q8TEV9 937 aaPredicted RBP13.09□□□□□ -0.31
SND1-210ENST00000483503 TMEM174Q8WUU8 243 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 HVCN1Q96D96 273 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 WDR24Q96S15 920 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 MPHOSPH6Q99547 160 aaKnown RBP13.09□□□□□ -0.31
SND1-210ENST00000483503 NAPGQ99747 312 aaPredicted RBP13.09□□□□□ -0.31
SND1-210ENST00000483503 DEF6Q9H4E7 631 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 ST6GALNAC4Q9H4F1 302 aa13.09□□□□□ -0.31
SND1-210ENST00000483503 A1CFQ9NQ94 594 aaKnown RBP13.09□□□□□ -0.31
SND1-210ENST00000483503 ZC3H4Q9UPT8 1303 aaKnown RBP13.09□□□□□ -0.31
SND1-210ENST00000483503 POLR2AP24928 1970 aaKnown RBP13.09□□□□□ -0.31
SND1-210ENST00000483503 A0A0G2JLL6 359 aaPredicted RBP13.08□□□□□ -0.32
SND1-210ENST00000483503 SFI1A8K8P3 1242 aa13.08□□□□□ -0.32
SND1-210ENST00000483503 K7ENM7 598 aa13.08□□□□□ -0.32
SND1-210ENST00000483503 ZBTB39O15060 712 aa13.08□□□□□ -0.32
SND1-210ENST00000483503 TGFB1I1O43294 461 aa13.08□□□□□ -0.32
SND1-210ENST00000483503 RRP9O43818 475 aaKnown RBP13.08□□□□□ -0.32
SND1-210ENST00000483503 EIF3JO75822 258 aaKnown RBP13.08□□□□□ -0.32
SND1-210ENST00000483503 SERPING1P05155 500 aa13.08□□□□□ -0.32
SND1-210ENST00000483503 ARHGAP25P42331 645 aa13.08□□□□□ -0.32
SND1-210ENST00000483503 IRX3P78415 501 aaPredicted RBP13.08□□□□□ -0.32
SND1-210ENST00000483503 NCBP1Q09161 790 aaKnown RBP13.08□□□□□ -0.32
SND1-210ENST00000483503 KCNMA1Q12791 1236 aa13.08□□□□□ -0.32
SND1-210ENST00000483503 MAPK8IP2Q13387 824 aaPredicted RBP13.08□□□□□ -0.32
SND1-210ENST00000483503 PPP2R5AQ15172 486 aa13.08□□□□□ -0.32
SND1-210ENST00000483503 SLC9C1Q4G0N8 1177 aa13.08□□□□□ -0.32
SND1-210ENST00000483503 GBP6Q6ZN66 633 aa13.08□□□□□ -0.32
SND1-210ENST00000483503 GADL1Q6ZQY3 521 aa13.08□□□□□ -0.32
SND1-210ENST00000483503 PRRT2Q7Z6L0 340 aaPredicted RBP13.08□□□□□ -0.32
SND1-210ENST00000483503 ANKRD35Q8N283 1001 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms