RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 MGAT3Q09327 533 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 PTPAQ15257 358 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 SF3A1Q15459 793 aaKnown RBP10.82□□□□□ -0.68
HMG20B-210ENST00000483417 ABHD15Q6UXT9 468 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 RUFY4Q6ZNE9 571 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 PLPPR4Q7Z2D5 763 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 SPRED2Q7Z698 418 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 RAD9AQ99638 391 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 JPH1Q9HDC5 661 aaPredicted RBP10.82□□□□□ -0.68
HMG20B-210ENST00000483417 PRDM6Q9NQX0 595 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 SLC9A2Q9UBY0 812 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 VAV3Q9UKW4 847 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.81□□□□□ -0.68
HMG20B-210ENST00000483417 ZBTB39O15060 712 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 CHMP2AO43633 222 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 LPXNO60711 386 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 INSRRP14616 1297 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 GCFC2P16383 781 aaKnown RBP10.81□□□□□ -0.68
HMG20B-210ENST00000483417 MARK3P27448 753 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 MARCKSP29966 332 aaPredicted RBP10.81□□□□□ -0.68
HMG20B-210ENST00000483417 CDC25AP30304 524 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 HTRA4P83105 476 aaPredicted RBP10.81□□□□□ -0.68
HMG20B-210ENST00000483417 SPIRE1Q08AE8 756 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 PPFIA1Q13136 1202 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 GRIK4Q16099 956 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 CALCRLQ16602 461 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 RILPL1Q5EBL4 403 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 LRCH2Q5VUJ6 765 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 SWSAP1Q6NVH7 229 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 TAF2Q6P1X5 1199 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 BRAPQ7Z569 592 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 GLG1Q92896 1179 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 FAM20AQ96MK3 541 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 ZSCAN16Q9H4T2 348 aaPredicted RBP10.81□□□□□ -0.68
HMG20B-210ENST00000483417 TTC12Q9H892 705 aaPredicted RBP10.81□□□□□ -0.68
HMG20B-210ENST00000483417 CERS4Q9HA82 394 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 NOL7Q9UMY1 257 aaKnown RBP10.81□□□□□ -0.68
HMG20B-210ENST00000483417 MTCH2Q9Y6C9 303 aa10.81□□□□□ -0.68
HMG20B-210ENST00000483417 RRN3P2A6NIE6 340 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 PP2D1A8MPX8 630 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 MARCH6O60337 910 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 NEMFO60524 1076 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 GAS7O60861 476 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 CTSHP09668 335 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 IGFBP4P22692 258 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 STAT5BP51692 787 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 PLCB4Q15147 1175 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 ECM1Q16610 540 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 UGCGQ16739 394 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 USP49Q70CQ1 688 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 TRMT1LQ7Z2T5 733 aaKnown RBP10.8□□□□□ -0.68
HMG20B-210ENST00000483417 SP7Q8TDD2 431 aaPredicted RBP10.8□□□□□ -0.68
HMG20B-210ENST00000483417 SEPT8Q92599 483 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 TOP1MTQ969P6 601 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 ZBTB10Q96DT7 871 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 CLIC6Q96NY7 704 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 RIT2Q99578 217 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 SDF4Q9BRK5 362 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 TEKT3Q9BXF9 490 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 TBC1D22BQ9NU19 505 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 RGL1Q9NZL6 768 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 WRAP73Q9P2S5 460 aaPredicted RBP10.8□□□□□ -0.68
HMG20B-210ENST00000483417 PCDHA12Q9UN75 941 aa10.8□□□□□ -0.68
HMG20B-210ENST00000483417 LINC01553A4QN01 128 aa10.79□□□□□ -0.68
HMG20B-210ENST00000483417 TBX3O15119 743 aa10.79□□□□□ -0.68
HMG20B-210ENST00000483417 SLITRK3O94933 977 aa10.79□□□□□ -0.68
HMG20B-210ENST00000483417 STBD1O95210 358 aa10.79□□□□□ -0.68
HMG20B-210ENST00000483417 BAG4O95429 457 aaKnown RBP10.79□□□□□ -0.68
HMG20B-210ENST00000483417 OR52Z1P0C646 297 aa10.79□□□□□ -0.68
HMG20B-210ENST00000483417 ERVK-21P61565 698 aa10.79□□□□□ -0.68
HMG20B-210ENST00000483417 ATP2C1P98194 919 aaPredicted RBP10.79□□□□□ -0.68
HMG20B-210ENST00000483417 SETQ01105 290 aaPredicted RBP10.79□□□□□ -0.68
HMG20B-210ENST00000483417 GRB10Q13322 594 aa10.79□□□□□ -0.68
HMG20B-210ENST00000483417 LPIN1Q14693 890 aa10.79□□□□□ -0.68
HMG20B-210ENST00000483417 CCDC85BQ15834 202 aaPredicted RBP10.79□□□□□ -0.68
HMG20B-210ENST00000483417 SPECC1Q5M775 1068 aa10.79□□□□□ -0.68
HMG20B-210ENST00000483417 CCDC60Q8IWA6 550 aaPredicted RBP10.79□□□□□ -0.68
HMG20B-210ENST00000483417 LINC00301Q8NCQ3 95 aa10.79□□□□□ -0.68
HMG20B-210ENST00000483417 DNAJB3Q8WWF6 145 aa10.79□□□□□ -0.68
HMG20B-210ENST00000483417 ATXN2LQ8WWM7 1075 aaKnown RBP10.79□□□□□ -0.68
HMG20B-210ENST00000483417 PPM1EQ8WY54 764 aa10.79□□□□□ -0.68
HMG20B-210ENST00000483417 ARNTL2Q8WYA1 636 aa10.79□□□□□ -0.68
HMG20B-210ENST00000483417 NAP1L4Q99733 375 aaKnown RBP10.79□□□□□ -0.68
HMG20B-210ENST00000483417 ZBED2Q9BTP6 218 aa10.79□□□□□ -0.68
HMG20B-210ENST00000483417 SUGCTQ9HAC7 445 aa10.79□□□□□ -0.68
HMG20B-210ENST00000483417 DISC1Q9NRI5 854 aa10.79□□□□□ -0.68
HMG20B-210ENST00000483417 TUBE1Q9UJT0 475 aa10.79□□□□□ -0.68
HMG20B-210ENST00000483417 PCDHA2Q9Y5H9 948 aa10.79□□□□□ -0.68
HMG20B-210ENST00000483417 TMEM150BA6NC51 233 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 POTEMA6NI47 508 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 ZBTB42B2RXF5 422 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 ENPP3O14638 875 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 ZNF862O60290 1169 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 AMHP03971 560 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 SPATA31C1P0DKV0 1188 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 SLC26A2P50443 739 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 PPP2R5CQ13362 524 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 CTTNQ14247 550 aaKnown RBP10.78□□□□□ -0.68
HMG20B-210ENST00000483417 SLC39A14Q15043 492 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 FBXO47Q5MNV8 452 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms