RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 EIF1AYO14602 144 aaKnown RBP6.87□□□□□ -1.31
CSDE1-207ENST00000483407 FOXP2O15409 715 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 SORBS3O60504 671 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 FGRP09769 529 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 PCP11498 1178 aaKnown RBP6.87□□□□□ -1.31
CSDE1-207ENST00000483407 CYP2C9P11712 490 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 PTGS1P23219 599 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 RPS6P62753 249 aaKnown RBP6.87□□□□□ -1.31
CSDE1-207ENST00000483407 PTPN11Q06124 597 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-207ENST00000483407 BFSP2Q13515 415 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 TTLL4Q14679 1199 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 MCMDC2Q4G0Z9 681 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 TMEM63BQ5T3F8 832 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 ANKRD45Q5TZF3 282 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 VPS53Q5VIR6 699 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 PDE12Q6L8Q7 609 aaKnown RBP6.87□□□□□ -1.31
CSDE1-207ENST00000483407 NFRKBQ6P4R8 1299 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 RASGRP2Q7LDG7 609 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 DEFB128Q7Z7B8 93 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 TICAM2Q86XR7 235 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 DNERQ8NFT8 737 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 PHOSPHO2Q8TCD6 241 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 OTUD7AQ8TE49 926 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-207ENST00000483407 ZFP42Q96MM3 310 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 TTC14Q96N46 770 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 SLC9A7Q96T83 725 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 TMEM47Q9BQJ4 181 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 FTOQ9C0B1 505 aaKnown RBP eCLIP6.87□□□□□ -1.31
CSDE1-207ENST00000483407 RNF41Q9H4P4 317 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-207ENST00000483407 C11orf16Q9NQ32 467 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 MYH7P12883 1935 aa6.87□□□□□ -1.31
CSDE1-207ENST00000483407 WDR19Q8NEZ3 1342 aa6.86□□□□□ -1.31
CSDE1-207ENST00000483407 CPNE3O75131 537 aaKnown RBP6.86□□□□□ -1.31
CSDE1-207ENST00000483407 TNFRSF21O75509 655 aa6.86□□□□□ -1.31
CSDE1-207ENST00000483407 FGAP02671 866 aa6.86□□□□□ -1.31
CSDE1-207ENST00000483407 F11P03951 625 aa6.86□□□□□ -1.31
CSDE1-207ENST00000483407 CA3P07451 260 aa6.86□□□□□ -1.31
CSDE1-207ENST00000483407 TXNP10599 105 aaKnown RBP6.86□□□□□ -1.31
CSDE1-207ENST00000483407 PDHBP11177 359 aa6.86□□□□□ -1.31
CSDE1-207ENST00000483407 MYOGP15173 224 aa6.86□□□□□ -1.31
CSDE1-207ENST00000483407 GRNP28799 593 aaKnown RBP6.86□□□□□ -1.31
CSDE1-207ENST00000483407 NT5C2P49902 561 aa6.86□□□□□ -1.31
CSDE1-207ENST00000483407 TYRO3Q06418 890 aa6.86□□□□□ -1.31
CSDE1-207ENST00000483407 ZNF543Q08ER8 600 aa6.86□□□□□ -1.31
CSDE1-207ENST00000483407 TRIP4Q15650 581 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-207ENST00000483407 GPATCH4Q5T3I0 446 aaKnown RBP6.86□□□□□ -1.31
CSDE1-207ENST00000483407 SLC30A10Q6XR72 485 aa6.86□□□□□ -1.31
CSDE1-207ENST00000483407 MFSD6Q6ZSS7 791 aa6.86□□□□□ -1.31
CSDE1-207ENST00000483407 NLRP8Q86W28 1048 aa6.86□□□□□ -1.31
CSDE1-207ENST00000483407 CCDC155Q8N6L0 562 aa6.86□□□□□ -1.31
CSDE1-207ENST00000483407 CLEC4DQ8WXI8 215 aa6.86□□□□□ -1.31
CSDE1-207ENST00000483407 FRMD6Q96NE9 622 aa6.86□□□□□ -1.31
CSDE1-207ENST00000483407 DNMT3LQ9UJW3 386 aa6.86□□□□□ -1.31
CSDE1-207ENST00000483407 USP20Q9Y2K6 914 aa6.86□□□□□ -1.31
CSDE1-207ENST00000483407 ZMYM6O95789 1325 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 SALL3Q9BXA9 1300 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 SCAMP3O14828 347 aaKnown RBP6.85□□□□□ -1.31
CSDE1-207ENST00000483407 BAIAP3O94812 1187 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 PARNO95453 639 aaKnown RBP6.85□□□□□ -1.31
CSDE1-207ENST00000483407 IQCF3P0C7M6 154 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 SNHG28P0DPA3 235 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 HSPD1P10809 573 aaKnown RBP6.85□□□□□ -1.31
CSDE1-207ENST00000483407 EPB42P16452 691 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 POU3F3P20264 500 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-207ENST00000483407 EDNRBP24530 442 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 GNA15P30679 374 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 KCNJ6P48051 423 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 PDE1AP54750 535 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 CHMP4BP1P59074 171 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 HAND2P61296 217 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 PSMD2Q13200 908 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 PTGISQ16647 500 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 USH1GQ495M9 461 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 CCDC178Q5BJE1 867 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 SAMD5Q5TGI4 173 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 IQCA1Q86XH1 822 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 CMTR1Q8N1G2 835 aaKnown RBP6.85□□□□□ -1.31
CSDE1-207ENST00000483407 CAGE1Q8TC20 777 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 ESR2Q92731 530 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 FAM227BQ96M60 508 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 MAF1Q9H063 256 aa6.85□□□□□ -1.31
CSDE1-207ENST00000483407 MYH4Q9Y623 1939 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 ABCB11O95342 1321 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 CCDC171Q6TFL3 1326 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 A0A0D9SFI3 127 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 RFXAPO00287 272 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 ZNF213O14771 459 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 AXIN1O15169 862 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 GH1P01241 217 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 CASTP20810 708 aaKnown RBP6.84□□□□□ -1.31
CSDE1-207ENST00000483407 TAP1Q03518 808 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.84□□□□□ -1.31
CSDE1-207ENST00000483407 ZNF438Q7Z4V0 828 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 DGKHQ86XP1 1220 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 MCF2L2Q86YR7 1114 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 HERC6Q8IVU3 1022 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 NSUN6Q8TEA1 469 aaKnown RBP6.84□□□□□ -1.31
CSDE1-207ENST00000483407 AFAP1L1Q8TED9 768 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 SNX29Q8TEQ0 813 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 ARNTL2Q8WYA1 636 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms