RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 PLCG1P19174 1290 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 NCLP19338 710 aaKnown RBP5.13□□□□□ -1.59
HDAC9-224ENST00000483142 ATP2B1P20020 1258 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 ATP4AP20648 1035 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 PTGS1P23219 599 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 MARCKSP29966 332 aaPredicted RBP5.13□□□□□ -1.59
HDAC9-224ENST00000483142 MCM4P33991 863 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 TCF7P36402 384 aaPredicted RBP5.13□□□□□ -1.59
HDAC9-224ENST00000483142 TXLNAP40222 546 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 RFC5P40937 340 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 QARSP47897 775 aaKnown RBP5.13□□□□□ -1.59
HDAC9-224ENST00000483142 ME1P48163 572 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 GJA8P48165 433 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 PSEN2P49810 448 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 PSMC5P62195 406 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 ADAM17P78536 824 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 PRKCEQ02156 737 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 FAM160A1Q05DH4 1040 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 PTPN11Q06124 597 aaPredicted RBP5.13□□□□□ -1.59
HDAC9-224ENST00000483142 LRRC41Q15345 812 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 FSCN1Q16658 493 aaKnown RBP5.13□□□□□ -1.59
HDAC9-224ENST00000483142 LY6KQ17RY6 165 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 PRAMEF19Q5SWL8 479 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 GJC2Q5T442 439 aaPredicted RBP5.13□□□□□ -1.59
HDAC9-224ENST00000483142 C1orf53Q5VUE5 145 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 FAM160B1Q5W0V3 765 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 KRT79Q5XKE5 535 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 NCAPH2Q6IBW4 605 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 MIS18BP1Q6P0N0 1132 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 PDXDC2PQ6P474 469 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 POTEBQ6S5H4 581 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 RBM43Q6ZSC3 357 aaKnown RBP5.13□□□□□ -1.59
HDAC9-224ENST00000483142 USP49Q70CQ1 688 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 CYFIP1Q7L576 1253 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 SH3RF1Q7Z6J0 888 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 UBE2Q1Q7Z7E8 422 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 CABP7Q86V35 215 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 CATSPER3Q86XQ3 398 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 FMR1NBQ8N0W7 255 aaPredicted RBP5.13□□□□□ -1.59
HDAC9-224ENST00000483142 SLC43A3Q8NBI5 491 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 SH3TC2Q8TF17 1288 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 ATP8B4Q8TF62 1192 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 AFG1LQ8WV93 481 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 KAT2BQ92831 832 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 GJA10Q969M2 543 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 TIGD1Q96MW7 591 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 SPATA33Q96N06 139 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 CLIC6Q96NY7 704 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 KCNK17Q96T54 332 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 EIF2AK1Q9BQI3 630 aaKnown RBP5.13□□□□□ -1.59
HDAC9-224ENST00000483142 KATNAL1Q9BW62 490 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 SLC4A5Q9BY07 1137 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 MCOLN1Q9GZU1 580 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 TNMDQ9H2S6 317 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 GOLPH3LQ9H4A5 285 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 BCAS3Q9H6U6 928 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 ZSWIM4Q9H7M6 989 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 GDPD2Q9HCC8 539 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 XPNPEP3Q9NQH7 507 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 KBTBD4Q9NVX7 518 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 KCND2Q9NZV8 630 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 WRAP73Q9P2S5 460 aaPredicted RBP5.13□□□□□ -1.59
HDAC9-224ENST00000483142 TFIP11Q9UBB9 837 aaKnown RBP5.13□□□□□ -1.59
HDAC9-224ENST00000483142 LRWD1Q9UFC0 647 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 USP25Q9UHP3 1055 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 ZNF215Q9UL58 517 aaPredicted RBP5.13□□□□□ -1.59
HDAC9-224ENST00000483142 TELO2Q9Y4R8 837 aa5.13□□□□□ -1.59
HDAC9-224ENST00000483142 FRMD3A2A2Y4 597 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 ZBTB42B2RXF5 422 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 GOLGA6L22H0YM25 854 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 DDX39AO00148 427 aaKnown RBP5.12□□□□□ -1.59
HDAC9-224ENST00000483142 NOP56O00567 594 aaKnown RBP5.12□□□□□ -1.59
HDAC9-224ENST00000483142 CHMP2AO43633 222 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 LILRB3O75022 631 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 SLITRK3O94933 977 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 C22orf31O95567 290 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 EYA4O95677 639 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 RPLP2P05387 115 aaKnown RBP5.12□□□□□ -1.59
HDAC9-224ENST00000483142 CCL5P13501 91 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 GUCY2CP25092 1073 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 TECP42680 631 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 RARRES1P49788 294 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 STAT5BP51692 787 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 ZNF131P52739 623 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 RTP1P59025 263 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 CEBPZQ03701 1054 aaKnown RBP5.12□□□□□ -1.59
HDAC9-224ENST00000483142 EHHADHQ08426 723 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 MAPK7Q13164 816 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 SNW1Q13573 536 aaKnown RBP5.12□□□□□ -1.59
HDAC9-224ENST00000483142 KARSQ15046 597 aaKnown RBP5.12□□□□□ -1.59
HDAC9-224ENST00000483142 PLCB4Q15147 1175 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 MTFR1Q15390 333 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 ECM1Q16610 540 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 DGKDQ16760 1214 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 QPCTQ16769 361 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 KLHL40Q2TBA0 621 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 BRDTQ58F21 947 aaPredicted RBP5.12□□□□□ -1.59
HDAC9-224ENST00000483142 XKR3Q5GH77 459 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 DMRTA1Q5VZB9 504 aa5.12□□□□□ -1.59
HDAC9-224ENST00000483142 POTEGQ6S5H5 508 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms