RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 GRAPLQ8TC17 118 aaPredicted RBP13.52□□□□□ -0.24
CCDC78-213ENST00000482878 ZHX3Q9H4I2 956 aa13.52□□□□□ -0.24
CCDC78-213ENST00000482878 MTMR4Q9NYA4 1195 aa13.52□□□□□ -0.24
CCDC78-213ENST00000482878 PCDHA2Q9Y5H9 948 aa13.52□□□□□ -0.24
CCDC78-213ENST00000482878 GRID2IPA4D2P6 1211 aa13.52□□□□□ -0.25
CCDC78-213ENST00000482878 hCG_1984214I3L0E3 225 aa13.52□□□□□ -0.25
CCDC78-213ENST00000482878 QPCTQ16769 361 aa13.52□□□□□ -0.25
CCDC78-213ENST00000482878 GNPTABQ3T906 1256 aa13.52□□□□□ -0.25
CCDC78-213ENST00000482878 GKAP1Q5VSY0 366 aaPredicted RBP13.52□□□□□ -0.25
CCDC78-213ENST00000482878 PPP4R3AQ6IN85 833 aa13.52□□□□□ -0.25
CCDC78-213ENST00000482878 SEPT12Q8IYM1 358 aa13.52□□□□□ -0.25
CCDC78-213ENST00000482878 ZNF713Q8N859 430 aaPredicted RBP13.52□□□□□ -0.25
CCDC78-213ENST00000482878 FAM170AA1A519 330 aa13.52□□□□□ -0.25
CCDC78-213ENST00000482878 DIAPH2O60879 1101 aa13.52□□□□□ -0.25
CCDC78-213ENST00000482878 CACNB3P54284 484 aa13.52□□□□□ -0.25
CCDC78-213ENST00000482878 KLHL30Q0D2K2 578 aa13.52□□□□□ -0.25
CCDC78-213ENST00000482878 DNAAF5Q86Y56 855 aa13.52□□□□□ -0.25
CCDC78-213ENST00000482878 SCFD1Q8WVM8 642 aa13.52□□□□□ -0.25
CCDC78-213ENST00000482878 JMJD4Q9H9V9 463 aa13.52□□□□□ -0.25
CCDC78-213ENST00000482878 CD209Q9NNX6 404 aa13.52□□□□□ -0.25
CCDC78-213ENST00000482878 RAD51CO43502 376 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 NBPF9Q3BBW0 867 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 TATDN2Q93075 761 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 CEP63Q96MT8 703 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 GOLPH3Q9H4A6 298 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 PCDHA12Q9UN75 941 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 PLAAQ9Y263 795 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 NAV1Q8NEY1 1877 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 FAM196BA6NMK8 535 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 GCOM1H8Y6P7 765 aaPredicted RBP13.51□□□□□ -0.25
CCDC78-213ENST00000482878 UPP2O95045 317 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 MYZAPP0CAP1 466 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 TRAF1Q13077 416 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 CDC37Q16543 378 aaPredicted RBP13.51□□□□□ -0.25
CCDC78-213ENST00000482878 KLHL7Q8IXQ5 586 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 GANQ9H2C0 597 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 KCTD10Q9H3F6 313 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 LUC7LQ9NQ29 371 aaKnown RBP13.51□□□□□ -0.25
CCDC78-213ENST00000482878 AIPL1Q9NZN9 384 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 KIAA1024Q9UPX6 916 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 HMGB1P1B2RPK0 211 aaPredicted RBP13.51□□□□□ -0.25
CCDC78-213ENST00000482878 ACTN1P12814 892 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 CLK2P49760 499 aaKnown RBP13.51□□□□□ -0.25
CCDC78-213ENST00000482878 ELF3P78545 371 aaPredicted RBP13.51□□□□□ -0.25
CCDC78-213ENST00000482878 GPSM2P81274 684 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 ICA1Q05084 483 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 KCTD19Q17RG1 926 aaPredicted RBP13.51□□□□□ -0.25
CCDC78-213ENST00000482878 ASPRV1Q53RT3 343 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 HERC4Q5GLZ8 1057 aaPredicted RBP13.51□□□□□ -0.25
CCDC78-213ENST00000482878 TTBK2Q6IQ55 1244 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 ADGRF4Q8IZF3 695 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 USP38Q8NB14 1042 aa13.51□□□□□ -0.25
CCDC78-213ENST00000482878 PHF20L1A8MW92 1017 aa13.5□□□□□ -0.25
CCDC78-213ENST00000482878 SNHG28P0DPA3 235 aa13.5□□□□□ -0.25
CCDC78-213ENST00000482878 AKR1B1P15121 316 aa13.5□□□□□ -0.25
CCDC78-213ENST00000482878 MARSP56192 900 aaKnown RBP13.5□□□□□ -0.25
CCDC78-213ENST00000482878 SEPT2Q15019 361 aa13.5□□□□□ -0.25
CCDC78-213ENST00000482878 BARGINQ6ZT62 677 aa13.5□□□□□ -0.25
CCDC78-213ENST00000482878 MREGQ8N565 214 aa13.5□□□□□ -0.25
CCDC78-213ENST00000482878 OR2W6PQ8NHA6 318 aa13.5□□□□□ -0.25
CCDC78-213ENST00000482878 MAGEC3Q8TD91 643 aa13.5□□□□□ -0.25
CCDC78-213ENST00000482878 BMP2KQ9NSY1 1161 aaPredicted RBP13.5□□□□□ -0.25
CCDC78-213ENST00000482878 C15orf41Q9Y2V0 281 aa13.5□□□□□ -0.25
CCDC78-213ENST00000482878 POTEB3A0JP26 581 aa13.5□□□□□ -0.25
CCDC78-213ENST00000482878 POTECB2RU33 542 aa13.5□□□□□ -0.25
CCDC78-213ENST00000482878 PECAM1P16284 738 aaPredicted RBP13.5□□□□□ -0.25
CCDC78-213ENST00000482878 ADAM9Q13443 819 aa13.5□□□□□ -0.25
CCDC78-213ENST00000482878 ASIC2Q16515 512 aa13.5□□□□□ -0.25
CCDC78-213ENST00000482878 PTPROQ16827 1216 aa13.5□□□□□ -0.25
CCDC78-213ENST00000482878 POTEBQ6S5H4 581 aa13.5□□□□□ -0.25
CCDC78-213ENST00000482878 C6orf89Q6UWU4 347 aa13.5□□□□□ -0.25
CCDC78-213ENST00000482878 PAGR1Q9BTK6 254 aa13.5□□□□□ -0.25
CCDC78-213ENST00000482878 PNMA6FA0A0J9YX94 578 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 KCNK3O14649 394 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 GNA14O95837 355 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 PLA2G4BP0C869 781 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 HOXA7P31268 230 aaPredicted RBP13.49□□□□□ -0.25
CCDC78-213ENST00000482878 SLC16A2P36021 539 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 PTK2Q05397 1052 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 KCNH2Q12809 1159 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 FAM133BQ5BKY9 247 aaKnown RBP13.49□□□□□ -0.25
CCDC78-213ENST00000482878 TRIM68Q6AZZ1 485 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 GPBP1Q86WP2 473 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 MAB21L3Q8N8X9 362 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 QTRT2Q9H974 415 aaKnown RBP13.49□□□□□ -0.25
CCDC78-213ENST00000482878 EMILIN3Q9NT22 766 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 TMEM59LQ9UK28 342 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 SERPINB2P05120 415 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 NEFHP12036 1026 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 RC3H1Q5TC82 1133 aaKnown RBP13.49□□□□□ -0.25
CCDC78-213ENST00000482878 DPP8Q6V1X1 898 aaPredicted RBP13.49□□□□□ -0.25
CCDC78-213ENST00000482878 CCDC65Q8IXS2 484 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 RPUSD2Q8IZ73 545 aaKnown RBP13.49□□□□□ -0.25
CCDC78-213ENST00000482878 PROCA1Q8NCQ7 364 aaPredicted RBP13.49□□□□□ -0.25
CCDC78-213ENST00000482878 ZC3H12CQ9C0D7 883 aaKnown RBP13.49□□□□□ -0.25
CCDC78-213ENST00000482878 MYBP10242 640 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 PLCG2P16885 1265 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 CYP11B2P19099 503 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 HYIQ5T013 277 aa13.49□□□□□ -0.25
CCDC78-213ENST00000482878 ZNF571Q7Z3V5 609 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms