RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 XKR9Q5GH70 373 aa13.9□□□□□ -0.18
IFT88-206ENST00000482172 GJC2Q5T442 439 aaPredicted RBP13.9□□□□□ -0.18
IFT88-206ENST00000482172 MAP3K21Q5TCX8 1036 aa13.9□□□□□ -0.18
IFT88-206ENST00000482172 ZNF658Q5TYW1 1059 aaPredicted RBP13.9□□□□□ -0.18
IFT88-206ENST00000482172 DYMQ7RTS9 669 aa13.9□□□□□ -0.18
IFT88-206ENST00000482172 TLK2Q86UE8 772 aa13.9□□□□□ -0.18
IFT88-206ENST00000482172 CCDC65Q8IXS2 484 aa13.9□□□□□ -0.18
IFT88-206ENST00000482172 SLAIN1Q8ND83 568 aa13.9□□□□□ -0.18
IFT88-206ENST00000482172 TRPV1Q8NER1 839 aa13.9□□□□□ -0.18
IFT88-206ENST00000482172 AFG1LQ8WV93 481 aa13.9□□□□□ -0.18
IFT88-206ENST00000482172 BBXQ8WY36 941 aaPredicted RBP13.9□□□□□ -0.18
IFT88-206ENST00000482172 GLG1Q92896 1179 aa13.9□□□□□ -0.18
IFT88-206ENST00000482172 CCDC43Q96MW1 224 aaKnown RBP13.9□□□□□ -0.18
IFT88-206ENST00000482172 RUSC1Q9BVN2 902 aa13.9□□□□□ -0.18
IFT88-206ENST00000482172 NAT10Q9H0A0 1025 aaKnown RBP13.9□□□□□ -0.18
IFT88-206ENST00000482172 DACH1Q9UI36 760 aa13.9□□□□□ -0.18
IFT88-206ENST00000482172 ODF2LQ9ULJ1 636 aa13.9□□□□□ -0.18
IFT88-206ENST00000482172 BIN1O00499 593 aa13.89□□□□□ -0.19
IFT88-206ENST00000482172 DYNC1LI2O43237 492 aaPredicted RBP13.89□□□□□ -0.19
IFT88-206ENST00000482172 LGALS2P05162 132 aa13.89□□□□□ -0.19
IFT88-206ENST00000482172 KRT18P05783 430 aaKnown RBP13.89□□□□□ -0.19
IFT88-206ENST00000482172 GAP43P17677 238 aa13.89□□□□□ -0.19
IFT88-206ENST00000482172 PPP1R2P41236 205 aa13.89□□□□□ -0.19
IFT88-206ENST00000482172 CPT1AP50416 773 aa13.89□□□□□ -0.19
IFT88-206ENST00000482172 ANO6Q4KMQ2 910 aa13.89□□□□□ -0.19
IFT88-206ENST00000482172 COBLL1Q53SF7 1204 aa13.89□□□□□ -0.19
IFT88-206ENST00000482172 BRDTQ58F21 947 aaPredicted RBP13.89□□□□□ -0.19
IFT88-206ENST00000482172 UTP14CQ5TAP6 766 aaKnown RBP13.89□□□□□ -0.19
IFT88-206ENST00000482172 GAS2L3Q86XJ1 694 aa13.89□□□□□ -0.19
IFT88-206ENST00000482172 EXOC8Q8IYI6 725 aa13.89□□□□□ -0.19
IFT88-206ENST00000482172 ATP8B4Q8TF62 1192 aa13.89□□□□□ -0.19
IFT88-206ENST00000482172 BPIFA3Q9BQP9 254 aa13.89□□□□□ -0.19
IFT88-206ENST00000482172 REEP2Q9BRK0 252 aa13.89□□□□□ -0.19
IFT88-206ENST00000482172 AP5M1Q9H0R1 490 aa13.89□□□□□ -0.19
IFT88-206ENST00000482172 CYP26B1Q9NR63 512 aa13.89□□□□□ -0.19
IFT88-206ENST00000482172 EXOC1Q9NV70 894 aa13.89□□□□□ -0.19
IFT88-206ENST00000482172 PANK4Q9NVE7 773 aa13.89□□□□□ -0.19
IFT88-206ENST00000482172 ERAP1Q9NZ08 941 aa13.89□□□□□ -0.19
IFT88-206ENST00000482172 SEPT9Q9UHD8 586 aaPredicted RBP13.89□□□□□ -0.19
IFT88-206ENST00000482172 MYH9P35579 1960 aaKnown RBP13.89□□□□□ -0.19
IFT88-206ENST00000482172 HBP1O60381 514 aa13.88□□□□□ -0.19
IFT88-206ENST00000482172 KPNA6O60684 536 aa13.88□□□□□ -0.19
IFT88-206ENST00000482172 DGAT1O75907 488 aa13.88□□□□□ -0.19
IFT88-206ENST00000482172 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
IFT88-206ENST00000482172 IDEP14735 1019 aa13.88□□□□□ -0.19
IFT88-206ENST00000482172 ELNP15502 786 aa13.88□□□□□ -0.19
IFT88-206ENST00000482172 BMP6P22004 513 aa13.88□□□□□ -0.19
IFT88-206ENST00000482172 ZNF131P52739 623 aa13.88□□□□□ -0.19
IFT88-206ENST00000482172 GJA9P57773 515 aa13.88□□□□□ -0.19
IFT88-206ENST00000482172 COASYQ13057 564 aa13.88□□□□□ -0.19
IFT88-206ENST00000482172 TARBP2Q15633 366 aaKnown RBP13.88□□□□□ -0.19
IFT88-206ENST00000482172 DPCR1Q3MIW9 517 aa13.88□□□□□ -0.19
IFT88-206ENST00000482172 CEP170P1Q96L14 293 aa13.88□□□□□ -0.19
IFT88-206ENST00000482172 C16orf70Q9BSU1 422 aa13.88□□□□□ -0.19
IFT88-206ENST00000482172 UPF3AQ9H1J1 476 aaKnown RBP13.88□□□□□ -0.19
IFT88-206ENST00000482172 PDLIM7Q9NR12 457 aa13.88□□□□□ -0.19
IFT88-206ENST00000482172 SEL1LQ9UBV2 794 aa13.88□□□□□ -0.19
IFT88-206ENST00000482172 ZNF215Q9UL58 517 aaPredicted RBP13.88□□□□□ -0.19
IFT88-206ENST00000482172 TRIM17Q9Y577 477 aa13.88□□□□□ -0.19
IFT88-206ENST00000482172 COL4A3BPQ9Y5P4 624 aa13.88□□□□□ -0.19
IFT88-206ENST00000482172 FSD2A1L4K1 749 aa13.87□□□□□ -0.19
IFT88-206ENST00000482172 TBCAO75347 108 aaKnown RBP13.87□□□□□ -0.19
IFT88-206ENST00000482172 PTGS1P23219 599 aa13.87□□□□□ -0.19
IFT88-206ENST00000482172 GRK4P32298 578 aa13.87□□□□□ -0.19
IFT88-206ENST00000482172 RFC5P40937 340 aa13.87□□□□□ -0.19
IFT88-206ENST00000482172 ZNF165P49910 485 aa13.87□□□□□ -0.19
IFT88-206ENST00000482172 NPEPPSP55786 919 aa13.87□□□□□ -0.19
IFT88-206ENST00000482172 PLCB4Q15147 1175 aa13.87□□□□□ -0.19
IFT88-206ENST00000482172 PLA2G4FQ68DD2 849 aa13.87□□□□□ -0.19
IFT88-206ENST00000482172 ISM2Q6H9L7 571 aa13.87□□□□□ -0.19
IFT88-206ENST00000482172 MCPH1Q8NEM0 835 aa13.87□□□□□ -0.19
IFT88-206ENST00000482172 FAM200AQ8TCP9 573 aa13.87□□□□□ -0.19
IFT88-206ENST00000482172 DRC1Q96MC2 740 aa13.87□□□□□ -0.19
IFT88-206ENST00000482172 CEP89Q96ST8 783 aa13.87□□□□□ -0.19
IFT88-206ENST00000482172 DNAJC25Q9H1X3 360 aa13.87□□□□□ -0.19
IFT88-206ENST00000482172 TSKSQ9UJT2 592 aa13.87□□□□□ -0.19
IFT88-206ENST00000482172 COL1A2P08123 1366 aa13.86□□□□□ -0.19
IFT88-206ENST00000482172 NPHP3-ACAD11A0A0J9YXS1 232 aa13.86□□□□□ -0.19
IFT88-206ENST00000482172 TMEM150BA6NC51 233 aa13.86□□□□□ -0.19
IFT88-206ENST00000482172 GOLGA6L3A6NEY3 463 aa13.86□□□□□ -0.19
IFT88-206ENST00000482172 H3BRB1 525 aa13.86□□□□□ -0.19
IFT88-206ENST00000482172 GAS2O43903 313 aaKnown RBP13.86□□□□□ -0.19
IFT88-206ENST00000482172 MSCO60682 206 aa13.86□□□□□ -0.19
IFT88-206ENST00000482172 FAM13AO94988 1023 aa13.86□□□□□ -0.19
IFT88-206ENST00000482172 RARBP10826 455 aa13.86□□□□□ -0.19
IFT88-206ENST00000482172 ERCC5P28715 1186 aaPredicted RBP13.86□□□□□ -0.19
IFT88-206ENST00000482172 RTP1P59025 263 aa13.86□□□□□ -0.19
IFT88-206ENST00000482172 TRIM32Q13049 653 aa13.86□□□□□ -0.19
IFT88-206ENST00000482172 MAPK7Q13164 816 aa13.86□□□□□ -0.19
IFT88-206ENST00000482172 FSCN1Q16658 493 aaKnown RBP13.86□□□□□ -0.19
IFT88-206ENST00000482172 HERC4Q5GLZ8 1057 aaPredicted RBP13.86□□□□□ -0.19
IFT88-206ENST00000482172 ZNF484Q5JVG2 852 aa13.86□□□□□ -0.19
IFT88-206ENST00000482172 C11orf57Q6ZUT1 292 aaPredicted RBP13.86□□□□□ -0.19
IFT88-206ENST00000482172 TRIM50Q86XT4 487 aa13.86□□□□□ -0.19
IFT88-206ENST00000482172 KIFAP3Q92845 792 aa13.86□□□□□ -0.19
IFT88-206ENST00000482172 JPH2Q9BR39 696 aaPredicted RBP13.86□□□□□ -0.19
IFT88-206ENST00000482172 TUT1Q9H6E5 874 aaKnown RBP13.86□□□□□ -0.19
IFT88-206ENST00000482172 DHX33Q9H6R0 707 aaKnown RBP13.86□□□□□ -0.19
IFT88-206ENST00000482172 C17orf75Q9HAS0 396 aa13.86□□□□□ -0.19
IFT88-206ENST00000482172 ATP6V0A4Q9HBG4 840 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms