RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 MYO15AQ9UKN7 3530 aa10.37□□□□□ -0.75
HLA-B-253ENST00000481849 PRR33A8MZF0 331 aa10.37□□□□□ -0.75
HLA-B-253ENST00000481849 HAS3O00219 553 aa10.37□□□□□ -0.75
HLA-B-253ENST00000481849 NOP56O00567 594 aaKnown RBP10.37□□□□□ -0.75
HLA-B-253ENST00000481849 PRC1O43663 620 aa10.37□□□□□ -0.75
HLA-B-253ENST00000481849 MAN1A2O60476 641 aa10.37□□□□□ -0.75
HLA-B-253ENST00000481849 PPFIA4O75335 1185 aa10.37□□□□□ -0.75
HLA-B-253ENST00000481849 PLEKHA8P1O95397 391 aa10.37□□□□□ -0.75
HLA-B-253ENST00000481849 THPOP40225 353 aa10.37□□□□□ -0.75
HLA-B-253ENST00000481849 MRPS9P82933 396 aaKnown RBP10.37□□□□□ -0.75
HLA-B-253ENST00000481849 TRIM71Q2Q1W2 868 aaKnown RBP10.37□□□□□ -0.75
HLA-B-253ENST00000481849 CNKSR3Q6P9H4 555 aa10.37□□□□□ -0.75
HLA-B-253ENST00000481849 USP17L6PQ6QN14 398 aa10.37□□□□□ -0.75
HLA-B-253ENST00000481849 CASC1Q6TDU7 716 aa10.37□□□□□ -0.75
HLA-B-253ENST00000481849 CYFIP1Q7L576 1253 aa10.37□□□□□ -0.75
HLA-B-253ENST00000481849 VASH1Q7L8A9 365 aaPredicted RBP10.37□□□□□ -0.75
HLA-B-253ENST00000481849 ZNF654Q8IZM8 581 aa10.37□□□□□ -0.75
HLA-B-253ENST00000481849 CTCFLQ8NI51 663 aaPredicted RBP10.37□□□□□ -0.75
HLA-B-253ENST00000481849 MAP4K1Q92918 833 aa10.37□□□□□ -0.75
HLA-B-253ENST00000481849 RRP36Q96EU6 259 aaKnown RBP10.37□□□□□ -0.75
HLA-B-253ENST00000481849 C16orf70Q9BSU1 422 aa10.37□□□□□ -0.75
HLA-B-253ENST00000481849 LY9Q9HBG7 655 aa10.37□□□□□ -0.75
HLA-B-253ENST00000481849 TELO2Q9Y4R8 837 aa10.37□□□□□ -0.75
HLA-B-253ENST00000481849 MTCH2Q9Y6C9 303 aa10.37□□□□□ -0.75
HLA-B-253ENST00000481849 hCG_1642624A0A1W2PR95 340 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 C17orf102A2RUQ5 167 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 CCDC69A6NI79 296 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 LGALS2P05162 132 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 CTSHP09668 335 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 BMP2P12643 396 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 KIF5BP33176 963 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 COL9A3Q14050 684 aaPredicted RBP10.36□□□□□ -0.75
HLA-B-253ENST00000481849 MBTPS1Q14703 1052 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 GNPTABQ3T906 1256 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 UTP14CQ5TAP6 766 aaKnown RBP10.36□□□□□ -0.75
HLA-B-253ENST00000481849 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.36□□□□□ -0.751e-6■■■□□ 16.5
HLA-B-253ENST00000481849 SKAP1Q86WV1 359 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 TRIM50Q86XT4 487 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 CCDC82Q8N4S0 544 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 SAMD3Q8N6K7 520 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 CUL5Q93034 780 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 ATP6V0A1Q93050 837 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 CNTNAP3BQ96NU0 1288 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 LRRC2Q9BYS8 371 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 CNTNAP3Q9BZ76 1288 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 SEC63Q9UGP8 760 aaKnown RBP10.36□□□□□ -0.75
HLA-B-253ENST00000481849 MYO9BQ13459 2157 aa10.36□□□□□ -0.75
HLA-B-253ENST00000481849 ABHD14A-ACY1A0A1B0GW23 586 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 RSPH10B2B2RC85 870 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 SPATA31C2B4DYI2 1134 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 H3BRB1 525 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 SH2B2O14492 632 aaPredicted RBP10.35□□□□□ -0.75
HLA-B-253ENST00000481849 DDAH1O94760 285 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 CXCL10P02778 98 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 RSPH10BP0C881 870 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 SMIM10L2AP0DMW4 78 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 SMIM10L2BP0DMW5 78 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 TGFB3P10600 412 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 HOXD8P13378 290 aaPredicted RBP10.35□□□□□ -0.75
HLA-B-253ENST00000481849 FSHRP23945 695 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 KCNQ1P51787 676 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 RBL2Q08999 1139 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 SEMA3FQ13275 785 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 GRB10Q13322 594 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 IKBKEQ14164 716 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 SRBD1Q8N5C6 995 aaKnown RBP10.35□□□□□ -0.75
HLA-B-253ENST00000481849 ZSCAN1Q8NBB4 408 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 GDPD5Q8WTR4 605 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 SPZ1Q9BXG8 430 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 LSG1Q9H089 658 aaKnown RBP10.35□□□□□ -0.75
HLA-B-253ENST00000481849 TUT1Q9H6E5 874 aaKnown RBP10.35□□□□□ -0.75
HLA-B-253ENST00000481849 ANO2Q9NQ90 1003 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 SETD4Q9NVD3 440 aa10.35□□□□□ -0.75
HLA-B-253ENST00000481849 SCN10AQ9Y5Y9 1956 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 WDR87Q6ZQQ6 2873 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 SLC27A2O14975 620 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 TREHO43280 583 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 FIBPO43427 364 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 LGR5O75473 907 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 GJB5O95377 273 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 PARNO95453 639 aaKnown RBP10.34□□□□□ -0.75
HLA-B-253ENST00000481849 ICAM3P32942 547 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 MCM5P33992 734 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 NEDD9Q14511 834 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 UBE2SQ16763 222 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 CREB3L3Q68CJ9 461 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 METTL7BQ6UX53 244 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 SERINC5Q86VE9 423 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 MYOCDQ8IZQ8 938 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 DBF4BQ8NFT6 615 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 INPP4AQ96PE3 977 aaPredicted RBP10.34□□□□□ -0.75
HLA-B-253ENST00000481849 RAD9AQ99638 391 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 GPR20Q99678 358 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 ESYT1Q9BSJ8 1104 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 C1QTNF2Q9BXJ5 285 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 OSBPL7Q9BZF2 842 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 RNPEPQ9H4A4 650 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 CACNA1HO95180 2353 aa10.34□□□□□ -0.75
HLA-B-253ENST00000481849 FRMPD4Q14CM0 1322 aa10.33□□□□□ -0.76
HLA-B-253ENST00000481849 ZFYVE26Q68DK2 2539 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms