RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 CYP11B2P19099 503 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 CNGA1P29973 690 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 SARSP49591 514 aaKnown RBP9.19□□□□□ -0.94
SYNE1-225ENST00000481502 RARRES1P49788 294 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 LBX1P52954 281 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 CYP4A11Q02928 519 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 ECM1Q16610 540 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 GNASQ5JWF2 1037 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 LHX8Q68G74 356 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 CCSAPQ6IQ19 270 aaPredicted RBP9.19□□□□□ -0.94
SYNE1-225ENST00000481502 C1orf186Q6ZWK4 172 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 ANO5Q75V66 913 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 SESTD1Q86VW0 696 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 ANKLE1Q8NAG6 615 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 BANK1Q8NDB2 785 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 COPS5Q92905 334 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 CCDC43Q96MW1 224 aaKnown RBP9.19□□□□□ -0.94
SYNE1-225ENST00000481502 MTG1Q9BT17 334 aaPredicted RBP9.19□□□□□ -0.94
SYNE1-225ENST00000481502 TRIM9Q9C026 710 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.19□□□□□ -0.94
SYNE1-225ENST00000481502 BHMT2Q9H2M3 363 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 DHX33Q9H6R0 707 aaKnown RBP9.19□□□□□ -0.94
SYNE1-225ENST00000481502 BCAS3Q9H6U6 928 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 CYP26B1Q9NR63 512 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 PHLPP2Q6ZVD8 1323 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 SYNRGQ9UMZ2 1314 aa9.19□□□□□ -0.94
SYNE1-225ENST00000481502 IGKV6-21A0A0C4DH24 114 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 FRMD3A2A2Y4 597 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 POTEFA5A3E0 1075 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 E9PMD0 336 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 ASAP2O43150 1006 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 ADCY6O43306 1168 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 KIF20AO95235 890 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 GJB1P08034 283 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 C6orf222P0C671 652 aaPredicted RBP9.18□□□□□ -0.94
SYNE1-225ENST00000481502 GAP43P17677 238 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 ATP4AP20648 1035 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 CCND3P30281 292 aaPredicted RBP9.18□□□□□ -0.94
SYNE1-225ENST00000481502 PURAQ00577 322 aaKnown RBP9.18□□□□□ -0.94
SYNE1-225ENST00000481502 PRKCEQ02156 737 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 POU5F1BQ06416 359 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 DPYDQ12882 1025 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 PLCB4Q15147 1175 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 ZRSR1Q15695 479 aaKnown RBP9.18□□□□□ -0.94
SYNE1-225ENST00000481502 COBLL1Q53SF7 1204 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 XKR9Q5GH70 373 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 RINT1Q6NUQ1 792 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 POTEGQ6S5H5 508 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 UNC13DQ70J99 1090 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 CCDC65Q8IXS2 484 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 CKAP2LQ8IYA6 745 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 RETREG2Q8NC44 543 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 TCP11Q8WWU5 503 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 SLC7A3Q8WY07 619 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 DDX12PQ92771 950 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 KIFAP3Q92845 792 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 ZNF333Q96JL9 665 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 CEP170P1Q96L14 293 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 DRC1Q96MC2 740 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 PANK2Q9BZ23 570 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 PDLIM7Q9NR12 457 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 TMEM63CQ9P1W3 806 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 LARSQ9P2J5 1176 aaKnown RBP9.18□□□□□ -0.94
SYNE1-225ENST00000481502 WRAP73Q9P2S5 460 aaPredicted RBP9.18□□□□□ -0.94
SYNE1-225ENST00000481502 TSKSQ9UJT2 592 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 OGDHLQ9ULD0 1010 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 COL4A3BPQ9Y5P4 624 aa9.18□□□□□ -0.94
SYNE1-225ENST00000481502 MYH9P35579 1960 aaKnown RBP9.17□□□□□ -0.94
SYNE1-225ENST00000481502 H0YCG3 227 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 DNM1LO00429 736 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 MAFO75444 373 aaPredicted RBP9.17□□□□□ -0.94
SYNE1-225ENST00000481502 ECM2O94769 699 aaPredicted RBP9.17□□□□□ -0.94
SYNE1-225ENST00000481502 RHOBTB3O94955 611 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 TMOD1P28289 359 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 HOXC8P31273 242 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 DNM2P50570 870 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 ZNF131P52739 623 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 PSMC6P62333 389 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 SP4Q02446 784 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 TRIM32Q13049 653 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 ALCAMQ13740 583 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 MCM6Q14566 821 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 MXD4Q14582 209 aaPredicted RBP9.17□□□□□ -0.94
SYNE1-225ENST00000481502 PPP2R5AQ15172 486 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 UGCGQ16739 394 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 UTP14CQ5TAP6 766 aaKnown RBP9.17□□□□□ -0.94
SYNE1-225ENST00000481502 CAVIN1Q6NZI2 390 aaKnown RBP9.17□□□□□ -0.94
SYNE1-225ENST00000481502 NFRKBQ6P4R8 1299 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 FOXR2Q6PJQ5 311 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 PADI6Q6TGC4 694 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 KCNK18Q7Z418 384 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 NME8Q8N427 588 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 PIGOQ8TEQ8 1089 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 SMARCE1Q969G3 411 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 DNAJC19Q96DA6 116 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 CEP89Q96ST8 783 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 MTRQ99707 1265 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 NTPCRQ9BSD7 190 aaKnown RBP9.17□□□□□ -0.94
SYNE1-225ENST00000481502 CRISPLD2Q9H0B8 497 aa9.17□□□□□ -0.94
SYNE1-225ENST00000481502 ATP6V0A4Q9HBG4 840 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms