RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 MAP3K4Q9Y6R4 1608 aa10.06□□□□□ -0.8
PDCD4-206ENST00000481353 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.06□□□□□ -0.8
PDCD4-206ENST00000481353 PITPNM2Q9BZ72 1349 aa10.06□□□□□ -0.8
PDCD4-206ENST00000481353 DYNC1I1O14576 645 aa10.05□□□□□ -0.8
PDCD4-206ENST00000481353 TGM5O43548 720 aa10.05□□□□□ -0.8
PDCD4-206ENST00000481353 ESR1P03372 595 aa10.05□□□□□ -0.8
PDCD4-206ENST00000481353 ZBTB48P10074 688 aaPredicted RBP10.05□□□□□ -0.8
PDCD4-206ENST00000481353 MYBL2P10244 700 aa10.05□□□□□ -0.8
PDCD4-206ENST00000481353 PHC1P78364 1004 aa10.05□□□□□ -0.8
PDCD4-206ENST00000481353 GPR19Q15760 415 aa10.05□□□□□ -0.8
PDCD4-206ENST00000481353 IFI16Q16666 785 aaKnown RBP10.05□□□□□ -0.8
PDCD4-206ENST00000481353 HABP4Q5JVS0 413 aaKnown RBP10.05□□□□□ -0.8
PDCD4-206ENST00000481353 HLA-DQA1Q5Y7H0 255 aa10.05□□□□□ -0.8
PDCD4-206ENST00000481353 CXorf57Q6NSI4 855 aaKnown RBP10.05□□□□□ -0.8
PDCD4-206ENST00000481353 HHIPL2Q6UWX4 724 aa10.05□□□□□ -0.8
PDCD4-206ENST00000481353 CHD1LQ86WJ1 897 aa10.05□□□□□ -0.8
PDCD4-206ENST00000481353 TMEM169Q96HH4 297 aa10.05□□□□□ -0.8
PDCD4-206ENST00000481353 ZBTB40Q9NUA8 1239 aa10.05□□□□□ -0.8
PDCD4-206ENST00000481353 NOL7Q9UMY1 257 aaKnown RBP10.05□□□□□ -0.8
PDCD4-206ENST00000481353 LUC7L2Q9Y383 392 aaKnown RBP10.05□□□□□ -0.8
PDCD4-206ENST00000481353 SPO11Q9Y5K1 396 aa10.05□□□□□ -0.8
PDCD4-206ENST00000481353 SPAG9O60271 1321 aaKnown RBP10.05□□□□□ -0.8
PDCD4-206ENST00000481353 NRXN1Q9ULB1 1477 aa10.04□□□□□ -0.8
PDCD4-206ENST00000481353 DEPDC5O75140 1603 aa10.04□□□□□ -0.8
PDCD4-206ENST00000481353 SLC12A8A0AV02 714 aa10.04□□□□□ -0.8
PDCD4-206ENST00000481353 H7C1D1 291 aa10.04□□□□□ -0.8
PDCD4-206ENST00000481353 U2AF1L5P0DN76 240 aaPredicted RBP10.04□□□□□ -0.8
PDCD4-206ENST00000481353 GRIK1P39086 918 aa10.04□□□□□ -0.8
PDCD4-206ENST00000481353 CEBPAP49715 358 aaPredicted RBP10.04□□□□□ -0.8
PDCD4-206ENST00000481353 U2AF1Q01081 240 aaKnown RBP eCLIP10.04□□□□□ -0.8
PDCD4-206ENST00000481353 BROXQ5VW32 411 aa10.04□□□□□ -0.8
PDCD4-206ENST00000481353 ZPBP2Q6X784 338 aa10.04□□□□□ -0.8
PDCD4-206ENST00000481353 CREG2Q8IUH2 290 aa10.04□□□□□ -0.8
PDCD4-206ENST00000481353 NETO1Q8TDF5 533 aa10.04□□□□□ -0.8
PDCD4-206ENST00000481353 PMM1Q92871 262 aa10.04□□□□□ -0.8
PDCD4-206ENST00000481353 KCNJ15Q99712 375 aa10.04□□□□□ -0.8
PDCD4-206ENST00000481353 LRRC4CQ9HCJ2 640 aa10.04□□□□□ -0.8
PDCD4-206ENST00000481353 DDX49Q9Y6V7 483 aaKnown RBP10.04□□□□□ -0.8
PDCD4-206ENST00000481353 KIF24Q5T7B8 1368 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 SHPRHQ149N8 1683 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 TMEM265A0A087WTH1 108 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 LOC102724159A0A0B4J2E5 919 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 KRTAP9-6A0A140TA67 174 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 WTIPA6NIX2 430 aaPredicted RBP10.03□□□□□ -0.8
PDCD4-206ENST00000481353 PRPF3O43395 683 aaKnown RBP10.03□□□□□ -0.8
PDCD4-206ENST00000481353 SNUPNO95149 360 aaKnown RBP10.03□□□□□ -0.8
PDCD4-206ENST00000481353 AMY2AP04746 511 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 KRT18P05783 430 aaKnown RBP10.03□□□□□ -0.8
PDCD4-206ENST00000481353 AMY2BP19961 511 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 MTHFSP49914 203 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 JAM2P57087 298 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 RHBDL3P58872 404 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 EGR3Q06889 387 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 UBE4AQ14139 1066 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 PWP2Q15269 919 aaKnown RBP10.03□□□□□ -0.8
PDCD4-206ENST00000481353 TERF2Q15554 542 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 GFOD2Q3B7J2 385 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 TMEM240Q5SV17 173 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 GPR158Q5T848 1215 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 INTS5Q6P9B9 1019 aaKnown RBP10.03□□□□□ -0.8
PDCD4-206ENST00000481353 CEP68Q76N32 757 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 WAPLQ7Z5K2 1190 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 OSTM1Q86WC4 334 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 ITPRIPQ8IWB1 547 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 C1orf162Q8NEQ5 155 aaPredicted RBP10.03□□□□□ -0.8
PDCD4-206ENST00000481353 JAM3Q9BX67 310 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 NSD3Q9BZ95 1437 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 ARNT2Q9HBZ2 717 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 C14orf119Q9NWQ9 140 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 CCDC39Q9UFE4 941 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 ZC3H7BQ9UGR2 993 aaKnown RBP10.03□□□□□ -0.8
PDCD4-206ENST00000481353 IP6K2Q9UHH9 426 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 YEATS2Q9ULM3 1422 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 NOB1Q9ULX3 412 aaKnown RBP10.03□□□□□ -0.8
PDCD4-206ENST00000481353 FANCAO15360 1455 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 KIF1BO60333 1816 aa10.03□□□□□ -0.8
PDCD4-206ENST00000481353 ADGRB2O60241 1585 aa10.02□□□□□ -0.81
PDCD4-206ENST00000481353 VWDEQ8N2E2 1590 aa10.02□□□□□ -0.81
PDCD4-206ENST00000481353 MT-CO1P00395 513 aa10.02□□□□□ -0.81
PDCD4-206ENST00000481353 CFBP00751 764 aa10.02□□□□□ -0.81
PDCD4-206ENST00000481353 RBP3P10745 1247 aa10.02□□□□□ -0.81
PDCD4-206ENST00000481353 GNAT1P11488 350 aa10.02□□□□□ -0.81
PDCD4-206ENST00000481353 TRIM27P14373 513 aa10.02□□□□□ -0.81
PDCD4-206ENST00000481353 RPL10P27635 214 aaKnown RBP10.02□□□□□ -0.81
PDCD4-206ENST00000481353 RECQLP46063 649 aaPredicted RBP10.02□□□□□ -0.81
PDCD4-206ENST00000481353 IRF9Q00978 393 aa10.02□□□□□ -0.81
PDCD4-206ENST00000481353 SPIRE1Q08AE8 756 aa10.02□□□□□ -0.81
PDCD4-206ENST00000481353 CASC1Q6TDU7 716 aa10.02□□□□□ -0.81
PDCD4-206ENST00000481353 RASSF3Q86WH2 238 aa10.02□□□□□ -0.81
PDCD4-206ENST00000481353 WFDC3Q8IUB2 231 aa10.02□□□□□ -0.81
PDCD4-206ENST00000481353 PNMA8BQ9ULN7 279 aaPredicted RBP10.02□□□□□ -0.81
PDCD4-206ENST00000481353 X6R8D5 127 aa10.02□□□□□ -0.81
PDCD4-206ENST00000481353 CLTCL1P53675 1640 aa10.02□□□□□ -0.81
PDCD4-206ENST00000481353 EVC2Q86UK5 1308 aa10.02□□□□□ -0.81
PDCD4-206ENST00000481353 TRAPPC8Q9Y2L5 1435 aa10.01□□□□□ -0.81
PDCD4-206ENST00000481353 TRIM75PA6NK02 468 aa10.01□□□□□ -0.81
PDCD4-206ENST00000481353 BAG4O95429 457 aaKnown RBP10.01□□□□□ -0.81
PDCD4-206ENST00000481353 MBD3O95983 291 aa10.01□□□□□ -0.81
PDCD4-206ENST00000481353 CCND1P24385 295 aa10.01□□□□□ -0.81
PDCD4-206ENST00000481353 MCM2P49736 904 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms