RNA–Protein interactions for RNA: ENST00000481273.5

PTK7-213, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTK7, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-213ENST00000481273 H0Y3Z8 333 aa11.87□□□□□ -0.51
PTK7-213ENST00000481273 MYBP10242 640 aa11.87□□□□□ -0.51
PTK7-213ENST00000481273 TNFAIP3P21580 790 aa11.87□□□□□ -0.51
PTK7-213ENST00000481273 STAT1P42224 750 aa11.87□□□□□ -0.51
PTK7-213ENST00000481273 DDB1Q16531 1140 aa11.87□□□□□ -0.51
PTK7-213ENST00000481273 LONRF1Q17RB8 773 aa11.87□□□□□ -0.51
PTK7-213ENST00000481273 SEMA4AQ9H3S1 761 aa11.87□□□□□ -0.51
PTK7-213ENST00000481273 PSTPIP2Q9H939 334 aa11.87□□□□□ -0.51
PTK7-213ENST00000481273 RIC8AQ9NPQ8 531 aa11.87□□□□□ -0.51
PTK7-213ENST00000481273 PLCB1Q9NQ66 1216 aa11.87□□□□□ -0.51
PTK7-213ENST00000481273 SH3GLB2Q9NR46 395 aa11.87□□□□□ -0.51
PTK7-213ENST00000481273 BSDC1Q9NW68 430 aaPredicted RBP11.87□□□□□ -0.51
PTK7-213ENST00000481273 HSPA9P38646 679 aaKnown RBP11.86□□□□□ -0.51
PTK7-213ENST00000481273 USP11P51784 963 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 TCP10Q12799 353 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 CUL1Q13616 776 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 PPP4R3AQ6IN85 833 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 INTS5Q6P9B9 1019 aaKnown RBP11.86□□□□□ -0.51
PTK7-213ENST00000481273 SYCP3Q8IZU3 236 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 SLC17A8Q8NDX2 589 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 KLHL29Q96CT2 875 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 C18orf8Q96DM3 657 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 SPDL1Q96EA4 605 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 ABCF3Q9NUQ8 709 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 SLAIN2Q9P270 581 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 STK17AQ9UEE5 414 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 TRIM33Q9UPN9 1127 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 PVALEFA0A1B0GWK0 134 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 A8MUI8 341 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 G3V3G9 751 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 AFPP02771 609 aaKnown RBP11.86□□□□□ -0.51
PTK7-213ENST00000481273 PRPHP41219 470 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 SESN3P58005 492 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 MTMR3Q13615 1198 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 DCAF8Q5TAQ9 597 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 TBC1D9BQ66K14 1250 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 TAB3Q8N5C8 712 aaPredicted RBP11.86□□□□□ -0.51
PTK7-213ENST00000481273 SCFD1Q8WVM8 642 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 LMBR1Q8WVP7 490 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 BHMT2Q9H2M3 363 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 FGFR1OP2Q9NVK5 253 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 PPP1R9AQ9ULJ8 1098 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 USP17L10C9JJH3 530 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 TPCN2Q8NHX9 752 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 SLC35G2Q8TBE7 412 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 NEK9Q8TD19 979 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 ACTR5Q9H9F9 607 aaPredicted RBP11.86□□□□□ -0.51
PTK7-213ENST00000481273 MAGEF1Q9HAY2 307 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 ZNF287Q9HBT7 754 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 SWAP70Q9UH65 585 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 ZBTB21Q9ULJ3 1066 aa11.86□□□□□ -0.51
PTK7-213ENST00000481273 DDX39AO00148 427 aaKnown RBP11.85□□□□□ -0.51
PTK7-213ENST00000481273 CLGNO14967 610 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 PJA2O43164 708 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 SPOPO43791 374 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 SCNN1DP51172 638 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 KCNJ2P63252 427 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 NFIXQ14938 502 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 ZC2HC1CQ53FD0 456 aaPredicted RBP11.85□□□□□ -0.51
PTK7-213ENST00000481273 TMC3Q7Z5M5 1100 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 HOOK3Q86VS8 718 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 MYCT1Q8N699 235 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 BTBD6Q96KE9 485 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 NUCKS1Q9H1E3 243 aaKnown RBP11.85□□□□□ -0.51
PTK7-213ENST00000481273 PCIF1Q9H4Z3 704 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 ASIC3Q9UHC3 531 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 PALM3A6NDB9 673 aaPredicted RBP11.85□□□□□ -0.51
PTK7-213ENST00000481273 PCP11498 1178 aaKnown RBP11.85□□□□□ -0.51
PTK7-213ENST00000481273 HOXA13P31271 388 aaPredicted RBP11.85□□□□□ -0.51
PTK7-213ENST00000481273 HNRNPH3P31942 346 aaKnown RBP11.85□□□□□ -0.51
PTK7-213ENST00000481273 RFC4P35249 363 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 PMS2P54278 862 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 ITIH3Q06033 890 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 MTM1Q13496 603 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 ASTE1Q2TB18 679 aaPredicted RBP11.85□□□□□ -0.51
PTK7-213ENST00000481273 ZNF662Q6ZS27 426 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 TPH2Q8IWU9 490 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 YIPF3Q9GZM5 350 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 ERVK-5Q9HDB9 667 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 RGL1Q9NZL6 768 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 AJAP1Q9UKB5 411 aaPredicted RBP11.85□□□□□ -0.51
PTK7-213ENST00000481273 SIPA1L3O60292 1781 aaPredicted RBP11.85□□□□□ -0.51
PTK7-213ENST00000481273 TCP11X1B4DZS4 312 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 F8VZ95 297 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 RBM5P52756 815 aaKnown RBP eCLIP11.85□□□□□ -0.51
PTK7-213ENST00000481273 CACNB3P54284 484 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 BIRC3Q13489 604 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 PBKQ96KB5 322 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 TRIM6Q9C030 488 aaPredicted RBP11.85□□□□□ -0.51
PTK7-213ENST00000481273 ACP6Q9NPH0 428 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 DONSONQ9NYP3 566 aa11.85□□□□□ -0.51
PTK7-213ENST00000481273 CAMTA1Q9Y6Y1 1673 aa11.84□□□□□ -0.51
PTK7-213ENST00000481273 COL1A1P02452 1464 aaPredicted RBP11.84□□□□□ -0.51
PTK7-213ENST00000481273 CCT8L1PA6NM43 557 aa11.84□□□□□ -0.51
PTK7-213ENST00000481273 EVI5O60447 810 aa11.84□□□□□ -0.51
PTK7-213ENST00000481273 RASSF9O75901 435 aa11.84□□□□□ -0.51
PTK7-213ENST00000481273 UBOX5O94941 541 aa11.84□□□□□ -0.51
PTK7-213ENST00000481273 CREB1P16220 341 aa11.84□□□□□ -0.51
PTK7-213ENST00000481273 MFSD14BQ5SR56 506 aa11.84□□□□□ -0.51
PTK7-213ENST00000481273 LRCH2Q5VUJ6 765 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms