RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 FAM20AQ96MK3 541 aa12.92□□□□□ -0.34
CCM2-213ENST00000480658 CERS4Q9HA82 394 aa12.92□□□□□ -0.34
CCM2-213ENST00000480658 SUGCTQ9HAC7 445 aa12.92□□□□□ -0.34
CCM2-213ENST00000480658 PTPRSQ13332 1948 aa12.92□□□□□ -0.34
CCM2-213ENST00000480658 EYSQ5T1H1 3165 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.91□□□□□ -0.34
CCM2-213ENST00000480658 DENND3A2RUS2 1198 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 LCHNA4D1U4 455 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 C5orf67F2Z3F1 127 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 H3BNC9 293 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 TBX3O15119 743 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 MSH4O15457 936 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 HOXA2O43364 376 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 RPS6KA5O75582 802 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 UPP2O95045 317 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 DNM2P50570 870 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 CRYBB1P53674 252 aaPredicted RBP12.91□□□□□ -0.34
CCM2-213ENST00000480658 STK3Q13188 491 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 TRIM29Q14134 588 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 CSPP1Q1MSJ5 1256 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 PUS10Q3MIT2 529 aaKnown RBP12.91□□□□□ -0.34
CCM2-213ENST00000480658 EPC2Q52LR7 807 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 NEK8Q86SG6 692 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 CMTR2Q8IYT2 770 aaKnown RBP12.91□□□□□ -0.34
CCM2-213ENST00000480658 GABBR1Q9UBS5 961 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 DDX25Q9UHL0 483 aaKnown RBP12.91□□□□□ -0.34
CCM2-213ENST00000480658 LRFN2Q9ULH4 789 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 PADI3Q9ULW8 664 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 FAM50BQ9Y247 325 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 TELO2Q9Y4R8 837 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 TET1Q8NFU7 2136 aa12.91□□□□□ -0.34
CCM2-213ENST00000480658 M0R2N6 131 aa12.9□□□□□ -0.34
CCM2-213ENST00000480658 ENPP3O14638 875 aa12.9□□□□□ -0.34
CCM2-213ENST00000480658 C22orf31O95567 290 aa12.9□□□□□ -0.34
CCM2-213ENST00000480658 CD52P31358 61 aa12.9□□□□□ -0.34
CCM2-213ENST00000480658 TBC1D8BQ0IIM8 1120 aa12.9□□□□□ -0.34
CCM2-213ENST00000480658 SCRN1Q12765 414 aa12.9□□□□□ -0.34
CCM2-213ENST00000480658 BTG3Q14201 252 aaPredicted RBP12.9□□□□□ -0.34
CCM2-213ENST00000480658 TCTN1Q2MV58 587 aa12.9□□□□□ -0.34
CCM2-213ENST00000480658 MIER3Q7Z3K6 550 aa12.9□□□□□ -0.34
CCM2-213ENST00000480658 TMEM192Q8IY95 271 aa12.9□□□□□ -0.34
CCM2-213ENST00000480658 SLFN12Q8IYM2 578 aa12.9□□□□□ -0.34
CCM2-213ENST00000480658 METTL13Q8N6R0 699 aa12.9□□□□□ -0.34
CCM2-213ENST00000480658 RASGRP4Q8TDF6 673 aa12.9□□□□□ -0.34
CCM2-213ENST00000480658 GDPD5Q8WTR4 605 aa12.9□□□□□ -0.34
CCM2-213ENST00000480658 CLP1Q92989 425 aaKnown RBP12.9□□□□□ -0.34
CCM2-213ENST00000480658 MBOAT7Q96N66 472 aa12.9□□□□□ -0.34
CCM2-213ENST00000480658 PHF20Q9BVI0 1012 aa12.9□□□□□ -0.34
CCM2-213ENST00000480658 AAASQ9NRG9 546 aa12.9□□□□□ -0.34
CCM2-213ENST00000480658 MTUS1Q9ULD2 1270 aa12.9□□□□□ -0.34
CCM2-213ENST00000480658 TRANK1O15050 2925 aa12.89□□□□□ -0.35
CCM2-213ENST00000480658 TNFRSF10AO00220 468 aa12.89□□□□□ -0.35
CCM2-213ENST00000480658 MARCH6O60337 910 aa12.89□□□□□ -0.35
CCM2-213ENST00000480658 LPXNO60711 386 aa12.89□□□□□ -0.35
CCM2-213ENST00000480658 PSMD10O75832 226 aa12.89□□□□□ -0.35
CCM2-213ENST00000480658 DGKIO75912 1065 aa12.89□□□□□ -0.35
CCM2-213ENST00000480658 BAG4O95429 457 aaKnown RBP12.89□□□□□ -0.35
CCM2-213ENST00000480658 KRT2P35908 639 aa12.89□□□□□ -0.35
CCM2-213ENST00000480658 SARSP49591 514 aaKnown RBP12.89□□□□□ -0.35
CCM2-213ENST00000480658 PRKCEQ02156 737 aa12.89□□□□□ -0.35
CCM2-213ENST00000480658 GPM6BQ13491 265 aa12.89□□□□□ -0.35
CCM2-213ENST00000480658 XKR3Q5GH77 459 aa12.89□□□□□ -0.35
CCM2-213ENST00000480658 SLC24A5Q71RS6 500 aa12.89□□□□□ -0.35
CCM2-213ENST00000480658 TMCO2Q7Z6W1 182 aaPredicted RBP12.89□□□□□ -0.35
CCM2-213ENST00000480658 KIAA0319LQ8IZA0 1049 aa12.89□□□□□ -0.35
CCM2-213ENST00000480658 ADAMTS19Q8TE59 1207 aa12.89□□□□□ -0.35
CCM2-213ENST00000480658 P2RX5Q93086 422 aa12.89□□□□□ -0.35
CCM2-213ENST00000480658 GTF3C6Q969F1 213 aa12.89□□□□□ -0.35
CCM2-213ENST00000480658 INO80BQ9C086 356 aaPredicted RBP12.89□□□□□ -0.35
CCM2-213ENST00000480658 AKT3Q9Y243 479 aa12.89□□□□□ -0.35
CCM2-213ENST00000480658 PCDHB7Q9Y5E2 793 aa12.89□□□□□ -0.35
CCM2-213ENST00000480658 EPOPA6NHQ4 379 aa12.88□□□□□ -0.35
CCM2-213ENST00000480658 CHMP2AO43633 222 aa12.88□□□□□ -0.35
CCM2-213ENST00000480658 GAS2O43903 313 aaKnown RBP12.88□□□□□ -0.35
CCM2-213ENST00000480658 ZSCAN20P17040 1043 aaPredicted RBP12.88□□□□□ -0.35
CCM2-213ENST00000480658 CTNNB1P35222 781 aa12.88□□□□□ -0.35
CCM2-213ENST00000480658 AK2P54819 239 aa12.88□□□□□ -0.35
CCM2-213ENST00000480658 TMEM62Q0P6H9 643 aa12.88□□□□□ -0.35
CCM2-213ENST00000480658 NFX1Q12986 1120 aaKnown RBP12.88□□□□□ -0.35
CCM2-213ENST00000480658 PPP2R5CQ13362 524 aa12.88□□□□□ -0.35
CCM2-213ENST00000480658 LETM2Q2VYF4 491 aa12.88□□□□□ -0.35
CCM2-213ENST00000480658 ETNPPLQ8TBG4 499 aa12.88□□□□□ -0.35
CCM2-213ENST00000480658 TRAPPC12Q8WVT3 735 aa12.88□□□□□ -0.35
CCM2-213ENST00000480658 ZNF689Q96CS4 500 aaPredicted RBP12.88□□□□□ -0.35
CCM2-213ENST00000480658 SCLT1Q96NL6 688 aa12.88□□□□□ -0.35
CCM2-213ENST00000480658 UHRF1Q96T88 793 aaPredicted RBP12.88□□□□□ -0.35
CCM2-213ENST00000480658 C17orf80Q9BSJ5 609 aa12.88□□□□□ -0.35
CCM2-213ENST00000480658 NSUN3Q9H649 340 aaKnown RBP12.88□□□□□ -0.35
CCM2-213ENST00000480658 ELAC1Q9H777 363 aaKnown RBP12.88□□□□□ -0.35
CCM2-213ENST00000480658 RC3H2Q9HBD1 1191 aaKnown RBP12.88□□□□□ -0.35
CCM2-213ENST00000480658 RGS18Q9NS28 235 aa12.88□□□□□ -0.35
CCM2-213ENST00000480658 DACT1Q9NYF0 836 aa12.88□□□□□ -0.35
CCM2-213ENST00000480658 ORC3Q9UBD5 711 aaPredicted RBP12.88□□□□□ -0.35
CCM2-213ENST00000480658 TPCN1Q9ULQ1 816 aa12.88□□□□□ -0.35
CCM2-213ENST00000480658 GINS2Q9Y248 185 aa12.88□□□□□ -0.35
CCM2-213ENST00000480658 ZBTB42B2RXF5 422 aa12.87□□□□□ -0.35
CCM2-213ENST00000480658 CCNT1O60563 726 aaKnown RBP12.87□□□□□ -0.35
CCM2-213ENST00000480658 ARHGEF15O94989 841 aa12.87□□□□□ -0.35
CCM2-213ENST00000480658 BMPR1AP36894 532 aa12.87□□□□□ -0.35
CCM2-213ENST00000480658 PSMC5P62195 406 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms