RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 STK38LQ9Y2H1 464 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 BZW2Q9Y6E2 419 aaKnown RBP11.56□□□□□ -0.56
SIK3-210ENST00000480468 FAM205AQ6ZU69 1335 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 TNS3Q68CZ2 1445 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 TULP1O00294 542 aaPredicted RBP11.56□□□□□ -0.56
SIK3-210ENST00000480468 ADAMTS3O15072 1205 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 GSTA2P09210 222 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 PCK1P35558 622 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 PEX5P50542 639 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 POLR2FP61218 127 aaKnown RBP11.56□□□□□ -0.56
SIK3-210ENST00000480468 IFI35P80217 286 aaPredicted RBP11.56□□□□□ -0.56
SIK3-210ENST00000480468 ACVR2BQ13705 512 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 CLUL1Q15846 466 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 TSNAXIP1Q2TAA8 658 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 PPP1R15BQ5SWA1 713 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 IRGCQ6NXR0 463 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 AGGF1Q8N302 714 aaeCLIP11.56□□□□□ -0.56
SIK3-210ENST00000480468 FITM2Q8N6M3 262 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 FAM81AQ8TBF8 368 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 IFT43Q96FT9 208 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 SYT15Q9BQS2 421 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 LSM14BQ9BX40 385 aaKnown RBP11.56□□□□□ -0.56
SIK3-210ENST00000480468 TRIM4Q9C037 500 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 LRMDAQ9H2I8 198 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 CYP39A1Q9NYL5 469 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 CD2APQ9Y5K6 639 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 SPDYE5A6NIY4 337 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 CYP27B1O15528 508 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 PEX11AO75192 247 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 SP100P23497 879 aaPredicted RBP11.55□□□□□ -0.56
SIK3-210ENST00000480468 RASGRF1Q13972 1273 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 DHX34Q14147 1143 aaKnown RBP11.55□□□□□ -0.56
SIK3-210ENST00000480468 TRIM68Q6AZZ1 485 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 PEX26Q7Z412 305 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 SESTD1Q86VW0 696 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 GPIHBP1Q8IV16 184 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 ASAP3Q8TDY4 903 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 CNKSR2Q8WXI2 1034 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 HES6Q96HZ4 224 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 TMEM237Q96Q45 408 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 NAP1L3Q99457 506 aaPredicted RBP11.55□□□□□ -0.56
SIK3-210ENST00000480468 ROPN1BQ9BZX4 212 aaPredicted RBP11.55□□□□□ -0.56
SIK3-210ENST00000480468 ROPN1Q9HAT0 212 aaPredicted RBP11.55□□□□□ -0.56
SIK3-210ENST00000480468 INTUQ9ULD6 942 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 COL4A3BPQ9Y5P4 624 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 RGPD5Q99666 1765 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 GNA14O95837 355 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 TPBGLP0DKB5 382 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 IFNAR2P48551 515 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 MARSP56192 900 aaKnown RBP11.55□□□□□ -0.56
SIK3-210ENST00000480468 RAPGEF1Q13905 1077 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 ATL2Q8NHH9 583 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 KCNV2Q8TDN2 545 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 PIGOQ8TEQ8 1089 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 CEP63Q96MT8 703 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 CCDC85AQ96PX6 553 aaPredicted RBP11.55□□□□□ -0.56
SIK3-210ENST00000480468 CELF4Q9BZC1 486 aaKnown RBP11.55□□□□□ -0.56
SIK3-210ENST00000480468 TANGO6Q9C0B7 1094 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 FGFR1OP2Q9NVK5 253 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.55□□□□□ -0.56
SIK3-210ENST00000480468 CHCHD3Q9NX63 227 aaKnown RBP11.55□□□□□ -0.56
SIK3-210ENST00000480468 STK17AQ9UEE5 414 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 NENFQ9UMX5 172 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 LRP5O75197 1615 aa11.55□□□□□ -0.56
SIK3-210ENST00000480468 CCDC88AQ3V6T2 1871 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 TUBP50607 506 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 RAD23BP54727 409 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 FKBP3Q00688 224 aaKnown RBP11.54□□□□□ -0.56
SIK3-210ENST00000480468 DR1Q01658 176 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 TXNRD1Q16881 649 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 WASHC2DQ5SRD0 308 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 SV2BQ7L1I2 683 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 INPP5DQ92835 1189 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 UTP4Q969X6 686 aaKnown RBP11.54□□□□□ -0.56
SIK3-210ENST00000480468 GRAMD1AQ96CP6 724 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 RBM41Q96IZ5 413 aaKnown RBP11.54□□□□□ -0.56
SIK3-210ENST00000480468 TRIM51Q9BSJ1 452 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 NKX1-2Q9UD57 310 aaPredicted RBP11.54□□□□□ -0.56
SIK3-210ENST00000480468 PNMA3Q9UL41 463 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 DAAM1Q9Y4D1 1078 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 MROH7Q68CQ1 1323 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 MROH5Q6ZUA9 1318 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 RPTORQ8N122 1335 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 TLDC2A0PJX2 215 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 MINDY4BA8MYZ0 360 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 TCP11X1B4DZS4 312 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 OR52Z1P0C646 297 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 AUHQ13825 339 aaKnown RBP11.54□□□□□ -0.56
SIK3-210ENST00000480468 SLC29A2Q14542 456 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 ZCWPW2Q504Y3 356 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 OR52E8Q6IFG1 317 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 TMEM154Q6P9G4 183 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 ZDHHC24Q6UX98 284 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 DAAM2Q86T65 1068 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 NT5DC3Q86UY8 548 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 FAM133AQ8N9E0 248 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 PROCA1Q8NCQ7 364 aaPredicted RBP11.54□□□□□ -0.56
SIK3-210ENST00000480468 DNAJC9Q8WXX5 260 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 KIFAP3Q92845 792 aa11.54□□□□□ -0.56
SIK3-210ENST00000480468 FAM136AQ96C01 138 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms