RNA–Protein interactions for RNA: ENST00000479584.1

CDK5RAP2-211, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 3

Gene CDK5RAP2, Length 611 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-211	ENST00000479584	RDM1	Q8NG50	284 aa		13.91	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	SP7	Q8TDD2	431 aa	Predicted RBP	13.91	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	SLC5A5	Q92911	643 aa		13.91	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	LENG9	Q96B70	501 aa		13.91	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	NAP1L4	Q99733	375 aa	Known RBP	13.91	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	BRMS1	Q9HCU9	246 aa		13.91	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	TPCN1	Q9ULQ1	816 aa		13.91	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	PADI3	Q9ULW8	664 aa		13.91	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	RWDD3	Q9Y3V2	267 aa		13.91	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	KDM3A	Q9Y4C1	1321 aa		13.9	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	CHMP2A	O43633	222 aa		13.9	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	MARCH6	O60337	910 aa		13.9	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	AK2	P54819	239 aa		13.9	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	NFX1	Q12986	1120 aa	Known RBP	13.9	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	EPC2	Q52LR7	807 aa		13.9	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	MOXD1	Q6UVY6	613 aa		13.9	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	TMEM192	Q8IY95	271 aa		13.9	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	KIAA0319L	Q8IZA0	1049 aa		13.9	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	GDPD5	Q8WTR4	605 aa		13.9	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	HLA-C	Q95604	372 aa		13.9	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	MAP7D2	Q96T17	732 aa		13.9	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	C17orf80	Q9BSJ5	609 aa		13.9	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	AGO3	Q9H9G7	860 aa	Known RBP	13.9	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	ORC3	Q9UBD5	711 aa	Predicted RBP	13.9	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	LRFN2	Q9ULH4	789 aa		13.9	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	KCNJ14	Q9UNX9	436 aa		13.9	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	KAT6A	Q92794	2004 aa		13.9	□□□□□ -0.18
CDK5RAP2-211	ENST00000479584	STK36	Q9NRP7	1315 aa		13.9	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	IGSF9B	Q9UPX0	1349 aa		13.9	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	GPR182	O15218	404 aa		13.89	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	ABCB7	O75027	752 aa		13.89	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	RPS6KA5	O75582	802 aa		13.89	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	OAT	P04181	439 aa		13.89	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	ATP4A	P20648	1035 aa		13.89	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	NEK4	P51957	841 aa		13.89	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	CRYBB1	P53674	252 aa	Predicted RBP	13.89	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	GPM6B	Q13491	265 aa		13.89	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	BTG3	Q14201	252 aa	Predicted RBP	13.89	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	LETM2	Q2VYF4	491 aa		13.89	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	KRT40	Q6A162	431 aa		13.89	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	MIER3	Q7Z3K6	550 aa		13.89	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	SPRED2	Q7Z698	418 aa		13.89	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	AIFM3	Q96NN9	605 aa		13.89	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	DDX25	Q9UHL0	483 aa	Known RBP	13.89	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	DOCK5	Q9H7D0	1870 aa		13.89	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	DENND3	A2RUS2	1198 aa		13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	LPXN	O60711	386 aa		13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	TDP2	O95551	362 aa		13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	C22orf31	O95567	290 aa		13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	RB1	P06400	928 aa		13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	GCFC2	P16383	781 aa	Known RBP	13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	CDC42EP1	Q00587	391 aa		13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	TRIM29	Q14134	588 aa		13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	INF2	Q27J81	1249 aa		13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	EFCAB12	Q6NXP0	572 aa		13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	NEK8	Q86SG6	692 aa		13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	NPAS4	Q8IUM7	802 aa		13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	MRPL38	Q96DV4	380 aa	Known RBP	13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	FAM20A	Q96MK3	541 aa		13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	PHF20	Q9BVI0	1012 aa		13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	UNC45A	Q9H3U1	944 aa		13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	AKT3	Q9Y243	479 aa		13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	PCDHB7	Q9Y5E2	793 aa		13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	TRANK1	O15050	2925 aa		13.88	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	ZBTB42	B2RXF5	422 aa		13.87	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584		H3BNC9	293 aa		13.87	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584		M0R2N6	131 aa		13.87	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	DKC1	O60832	514 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	PSMD10	O75832	226 aa		13.87	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	BAG4	O95429	457 aa	Known RBP	13.87	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	CTNNB1	P35222	781 aa		13.87	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	DNM2	P50570	870 aa		13.87	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	PRKCE	Q02156	737 aa		13.87	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	TBC1D8B	Q0IIM8	1120 aa		13.87	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	KIZ	Q2M2Z5	673 aa		13.87	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	TMEM266	Q2M3C6	531 aa		13.87	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	XKR3	Q5GH77	459 aa		13.87	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	PPP4R3A	Q6IN85	833 aa		13.87	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	SCLT1	Q96NL6	688 aa		13.87	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.87	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	C1orf112	Q9NSG2	853 aa		13.87	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	ADGRA3	Q8IWK6	1321 aa		13.87	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	EDIL3	O43854	480 aa		13.86	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	CCNT1	O60563	726 aa	Known RBP	13.86	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	DGKI	O75912	1065 aa		13.86	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	VTN	P04004	478 aa		13.86	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	IBSP	P21815	317 aa	Predicted RBP	13.86	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	BMPR1A	P36894	532 aa		13.86	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	TIGD5	Q53EQ6	642 aa		13.86	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	PIK3AP1	Q6ZUJ8	805 aa		13.86	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	SLC24A5	Q71RS6	500 aa		13.86	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.86	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	NECAB1	Q8N987	351 aa		13.86	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	ADAMTS19	Q8TE59	1207 aa		13.86	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	GTF3C6	Q969F1	213 aa		13.86	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	MBOAT7	Q96N66	472 aa		13.86	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	ST3GAL5	Q9UNP4	418 aa		13.86	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	NOC2L	Q9Y3T9	749 aa	Known RBP	13.86	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	GBF1	Q92538	1859 aa		13.86	□□□□□ -0.19
CDK5RAP2-211	ENST00000479584	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms