RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 APOBEC2Q9Y235 224 aaKnown RBP7.59□□□□□ -1.19
CCDC58-204ENST00000479414 DDX3XO00571 662 aaKnown RBP eCLIP7.58□□□□□ -1.23e-11■■■□□ 16.1
CCDC58-204ENST00000479414 MAFO75444 373 aaPredicted RBP7.58□□□□□ -1.2
CCDC58-204ENST00000479414 ZSCAN22P10073 491 aaPredicted RBP7.58□□□□□ -1.2
CCDC58-204ENST00000479414 ID4P47928 161 aa7.58□□□□□ -1.2
CCDC58-204ENST00000479414 SLURP1P55000 103 aa7.58□□□□□ -1.2
CCDC58-204ENST00000479414 JAG1P78504 1218 aa7.58□□□□□ -1.2
CCDC58-204ENST00000479414 ATP13A4Q4VNC1 1196 aa7.58□□□□□ -1.2
CCDC58-204ENST00000479414 FAM26FQ5R3K3 315 aa7.58□□□□□ -1.2
CCDC58-204ENST00000479414 KANK2Q63ZY3 851 aa7.58□□□□□ -1.2
CCDC58-204ENST00000479414 TRMT10BQ6PF06 316 aaKnown RBP7.58□□□□□ -1.2
CCDC58-204ENST00000479414 LCNL1Q6ZST4 164 aa7.58□□□□□ -1.2
CCDC58-204ENST00000479414 CALML6Q8TD86 181 aa7.58□□□□□ -1.2
CCDC58-204ENST00000479414 ERCC4Q92889 916 aaPredicted RBP7.58□□□□□ -1.2
CCDC58-204ENST00000479414 YTHDC1Q96MU7 727 aaKnown RBP7.58□□□□□ -1.2
CCDC58-204ENST00000479414 OR10A5Q9H207 317 aa7.58□□□□□ -1.2
CCDC58-204ENST00000479414 LUC7LQ9NQ29 371 aaKnown RBP7.58□□□□□ -1.2
CCDC58-204ENST00000479414 UBA6A0AVT1 1052 aaPredicted RBP7.57□□□□□ -1.2
CCDC58-204ENST00000479414 KLHL18O94889 574 aa7.57□□□□□ -1.2
CCDC58-204ENST00000479414 PRLP01236 227 aa7.57□□□□□ -1.2
CCDC58-204ENST00000479414 CD40P25942 277 aa7.57□□□□□ -1.2
CCDC58-204ENST00000479414 CDKN1CP49918 316 aaPredicted RBP7.57□□□□□ -1.2
CCDC58-204ENST00000479414 IL13RA1P78552 427 aa7.57□□□□□ -1.2
CCDC58-204ENST00000479414 STAT4Q14765 748 aa7.57□□□□□ -1.2
CCDC58-204ENST00000479414 TERF2Q15554 542 aa7.57□□□□□ -1.2
CCDC58-204ENST00000479414 TTC38Q5R3I4 469 aa7.57□□□□□ -1.2
CCDC58-204ENST00000479414 ZNF761Q86XN6 746 aaPredicted RBP7.57□□□□□ -1.2
CCDC58-204ENST00000479414 ZNF610Q8N9Z0 462 aa7.57□□□□□ -1.2
CCDC58-204ENST00000479414 ADAMTS17Q8TE56 1095 aa7.57□□□□□ -1.2
CCDC58-204ENST00000479414 SLC5A5Q92911 643 aa7.57□□□□□ -1.2
CCDC58-204ENST00000479414 MAML3Q96JK9 1138 aa7.57□□□□□ -1.2
CCDC58-204ENST00000479414 L2HGDHQ9H9P8 463 aa7.57□□□□□ -1.2
CCDC58-204ENST00000479414 H0Y858 1186 aa7.56□□□□□ -1.2
CCDC58-204ENST00000479414 LSP1P33241 339 aa7.56□□□□□ -1.2
CCDC58-204ENST00000479414 EVA1CP58658 441 aa7.56□□□□□ -1.2
CCDC58-204ENST00000479414 ROM1Q03395 351 aa7.56□□□□□ -1.2
CCDC58-204ENST00000479414 RPUSD2Q8IZ73 545 aaKnown RBP7.56□□□□□ -1.2
CCDC58-204ENST00000479414 SPATA25Q9BR10 227 aa7.56□□□□□ -1.2
CCDC58-204ENST00000479414 BRINP2Q9C0B6 783 aa7.56□□□□□ -1.2
CCDC58-204ENST00000479414 USP36Q9P275 1121 aaKnown RBP7.56□□□□□ -1.2
CCDC58-204ENST00000479414 FTSJ1Q9UET6 329 aa7.56□□□□□ -1.2
CCDC58-204ENST00000479414 C9orf118A6NHY6 69 aa7.55□□□□□ -1.2
CCDC58-204ENST00000479414 TRIM13O60858 407 aa7.55□□□□□ -1.2
CCDC58-204ENST00000479414 APEX1P27695 318 aaKnown RBP7.55□□□□□ -1.2
CCDC58-204ENST00000479414 SLC6A3Q01959 620 aa7.55□□□□□ -1.2
CCDC58-204ENST00000479414 DDB1Q16531 1140 aa7.55□□□□□ -1.2
CCDC58-204ENST00000479414 DDX42Q86XP3 938 aaKnown RBP eCLIP7.55□□□□□ -1.2
CCDC58-204ENST00000479414 PHYKPLQ8IUZ5 450 aa7.55□□□□□ -1.2
CCDC58-204ENST00000479414 SP8Q8IXZ3 490 aa7.55□□□□□ -1.2
CCDC58-204ENST00000479414 TXNDC5Q8NBS9 432 aaKnown RBP7.55□□□□□ -1.2
CCDC58-204ENST00000479414 RTF1Q92541 710 aaKnown RBP7.55□□□□□ -1.2
CCDC58-204ENST00000479414 MCM8Q9UJA3 840 aa7.55□□□□□ -1.2
CCDC58-204ENST00000479414 ATP8A1Q9Y2Q0 1164 aa7.55□□□□□ -1.2
CCDC58-204ENST00000479414 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.54□□□□□ -1.2
CCDC58-204ENST00000479414 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.54□□□□□ -1.2
CCDC58-204ENST00000479414 GPR39O43194 453 aa7.54□□□□□ -1.2
CCDC58-204ENST00000479414 ULK1O75385 1050 aa7.54□□□□□ -1.2
CCDC58-204ENST00000479414 WDR72Q3MJ13 1102 aa7.54□□□□□ -1.2
CCDC58-204ENST00000479414 BROXQ5VW32 411 aa7.54□□□□□ -1.2
CCDC58-204ENST00000479414 MCTP2Q6DN12 878 aa7.54□□□□□ -1.2
CCDC58-204ENST00000479414 SLFN12LQ6IEE8 588 aa7.54□□□□□ -1.2
CCDC58-204ENST00000479414 C7orf31Q8N865 590 aa7.54□□□□□ -1.2
CCDC58-204ENST00000479414 MARCH10Q8NA82 808 aaPredicted RBP7.54□□□□□ -1.2
CCDC58-204ENST00000479414 NUDT10Q8NFP7 164 aa7.54□□□□□ -1.2
CCDC58-204ENST00000479414 WDR48Q8TAF3 677 aa7.54□□□□□ -1.2
CCDC58-204ENST00000479414 ZCRB1Q8TBF4 217 aaKnown RBP7.54□□□□□ -1.2
CCDC58-204ENST00000479414 NUDT11Q96G61 164 aa7.54□□□□□ -1.2
CCDC58-204ENST00000479414 TUBGCP5Q96RT8 1024 aa7.54□□□□□ -1.2
CCDC58-204ENST00000479414 TMEM168Q9H0V1 697 aa7.54□□□□□ -1.2
CCDC58-204ENST00000479414 FBXO10Q9UK96 956 aa7.54□□□□□ -1.2
CCDC58-204ENST00000479414 NOBOXO60393 691 aa7.53□□□□□ -1.2
CCDC58-204ENST00000479414 CYP1A1P04798 512 aaPredicted RBP7.53□□□□□ -1.2
CCDC58-204ENST00000479414 KCNC1P48547 511 aa7.53□□□□□ -1.2
CCDC58-204ENST00000479414 RGS3P49796 1198 aa7.53□□□□□ -1.2
CCDC58-204ENST00000479414 SESN3P58005 492 aa7.53□□□□□ -1.2
CCDC58-204ENST00000479414 TOP3AQ13472 1001 aaPredicted RBP7.53□□□□□ -1.2
CCDC58-204ENST00000479414 MYBPC3Q14896 1274 aa7.53□□□□□ -1.2
CCDC58-204ENST00000479414 RGL3Q3MIN7 710 aa7.53□□□□□ -1.2
CCDC58-204ENST00000479414 RNF219Q5W0B1 726 aaPredicted RBP7.53□□□□□ -1.2
CCDC58-204ENST00000479414 Q6ZUG5 572 aa7.53□□□□□ -1.2
CCDC58-204ENST00000479414 KANSL1Q7Z3B3 1105 aa7.53□□□□□ -1.2
CCDC58-204ENST00000479414 RASSF3Q86WH2 238 aa7.53□□□□□ -1.2
CCDC58-204ENST00000479414 KLHL36Q8N4N3 616 aa7.53□□□□□ -1.2
CCDC58-204ENST00000479414 ATL2Q8NHH9 583 aa7.53□□□□□ -1.2
CCDC58-204ENST00000479414 WDR66Q8TBY9 1149 aa7.53□□□□□ -1.2
CCDC58-204ENST00000479414 ZNF496Q96IT1 587 aaPredicted RBP7.53□□□□□ -1.2
CCDC58-204ENST00000479414 KCNC2Q96PR1 638 aa7.53□□□□□ -1.2
CCDC58-204ENST00000479414 PHLDB1Q86UU1 1377 aa7.52□□□□□ -1.21
CCDC58-204ENST00000479414 KRTAP9-6A0A140TA67 174 aa7.52□□□□□ -1.21
CCDC58-204ENST00000479414 CUTAO60888 179 aa7.52□□□□□ -1.21
CCDC58-204ENST00000479414 POLD1P28340 1107 aa7.52□□□□□ -1.21
CCDC58-204ENST00000479414 CD83Q01151 205 aa7.52□□□□□ -1.21
CCDC58-204ENST00000479414 TMEM200BQ69YZ2 307 aa7.52□□□□□ -1.21
CCDC58-204ENST00000479414 TIGD7Q6NT04 549 aaPredicted RBP7.52□□□□□ -1.21
CCDC58-204ENST00000479414 SPATS2Q86XZ4 545 aaKnown RBP7.52□□□□□ -1.21
CCDC58-204ENST00000479414 REXO1L1PQ8IX06 675 aa7.52□□□□□ -1.21
CCDC58-204ENST00000479414 PRPF38AQ8NAV1 312 aaKnown RBP7.52□□□□□ -1.21
CCDC58-204ENST00000479414 CLRN3Q8NCR9 226 aa7.52□□□□□ -1.21
CCDC58-204ENST00000479414 MBD6Q96DN6 1003 aa7.52□□□□□ -1.21
CCDC58-204ENST00000479414 AJUBAQ96IF1 538 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms