RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 FBXO47Q5MNV8 452 aa23.31■■□□□ 1.32
PKP4-209ENST00000479398 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.31■■□□□ 1.32
PKP4-209ENST00000479398 APBB2Q92870 758 aa23.31■■□□□ 1.32
PKP4-209ENST00000479398 CDX2Q99626 313 aaPredicted RBP23.31■■□□□ 1.32
PKP4-209ENST00000479398 IFIH1Q9BYX4 1025 aaKnown RBP23.31■■□□□ 1.32
PKP4-209ENST00000479398 CELF4Q9BZC1 486 aaKnown RBP23.31■■□□□ 1.32
PKP4-209ENST00000479398 SLC28A3Q9HAS3 691 aa23.31■■□□□ 1.32
PKP4-209ENST00000479398 TRPV2Q9Y5S1 764 aa23.31■■□□□ 1.32
PKP4-209ENST00000479398 SQORQ9Y6N5 450 aa23.31■■□□□ 1.32
PKP4-209ENST00000479398 M0QZ92 97 aa23.3■■□□□ 1.32
PKP4-209ENST00000479398 WNT7AO00755 349 aa23.3■■□□□ 1.32
PKP4-209ENST00000479398 STBD1O95210 358 aa23.3■■□□□ 1.32
PKP4-209ENST00000479398 C22orf31O95567 290 aa23.3■■□□□ 1.32
PKP4-209ENST00000479398 PSMC5P62195 406 aa23.3■■□□□ 1.32
PKP4-209ENST00000479398 XKR3Q5GH77 459 aa23.3■■□□□ 1.32
PKP4-209ENST00000479398 NIFKQ9BYG3 293 aaKnown RBP23.3■■□□□ 1.32
PKP4-209ENST00000479398 PCDHA12Q9UN75 941 aa23.3■■□□□ 1.32
PKP4-209ENST00000479398 STXBP5LQ9Y2K9 1186 aa23.3■■□□□ 1.32
PKP4-209ENST00000479398 PTPRSQ13332 1948 aa23.29■■□□□ 1.32
PKP4-209ENST00000479398 LOXHD1Q8IVV2 1947 aa23.29■■□□□ 1.32
PKP4-209ENST00000479398 ATP2B1P20020 1258 aa23.29■■□□□ 1.32
PKP4-209ENST00000479398 MYO9BQ13459 2157 aa23.29■■□□□ 1.32
PKP4-209ENST00000479398 GRIN2CQ14957 1233 aa23.29■■□□□ 1.32
PKP4-209ENST00000479398 EPHA7Q15375 998 aa23.29■■□□□ 1.32
PKP4-209ENST00000479398 CALCRLQ16602 461 aa23.29■■□□□ 1.32
PKP4-209ENST00000479398 MICAL3Q7RTP6 2002 aa23.29■■□□□ 1.32
PKP4-209ENST00000479398 TMCO2Q7Z6W1 182 aaPredicted RBP23.29■■□□□ 1.32
PKP4-209ENST00000479398 METTL13Q8N6R0 699 aa23.29■■□□□ 1.32
PKP4-209ENST00000479398 USP38Q8NB14 1042 aa23.29■■□□□ 1.32
PKP4-209ENST00000479398 BANK1Q8NDB2 785 aa23.29■■□□□ 1.32
PKP4-209ENST00000479398 KIF3AQ9Y496 699 aa23.29■■□□□ 1.32
PKP4-209ENST00000479398 KDM3AQ9Y4C1 1321 aa23.29■■□□□ 1.32
PKP4-209ENST00000479398 SIP14410 1827 aa23.29■■□□□ 1.32
PKP4-209ENST00000479398 NEMFO60524 1076 aa23.28■■□□□ 1.32
PKP4-209ENST00000479398 AMHP03971 560 aa23.28■■□□□ 1.32
PKP4-209ENST00000479398 P4HBP07237 508 aaKnown RBP23.28■■□□□ 1.32
PKP4-209ENST00000479398 QARSP47897 775 aaKnown RBP23.28■■□□□ 1.32
PKP4-209ENST00000479398 TARBP2Q15633 366 aaKnown RBP23.28■■□□□ 1.32
PKP4-209ENST00000479398 EFCAB12Q6NXP0 572 aa23.28■■□□□ 1.32
PKP4-209ENST00000479398 TSHZ1Q6ZSZ6 1077 aa23.28■■□□□ 1.32
PKP4-209ENST00000479398 MTMR9Q96QG7 549 aa23.28■■□□□ 1.32
PKP4-209ENST00000479398 ZBED2Q9BTP6 218 aa23.28■■□□□ 1.32
PKP4-209ENST00000479398 AGO3Q9H9G7 860 aaKnown RBP23.28■■□□□ 1.32
PKP4-209ENST00000479398 DDX11L8A8MPP1 907 aa23.27■■□□□ 1.32
PKP4-209ENST00000479398 TLL1O43897 1013 aa23.27■■□□□ 1.32
PKP4-209ENST00000479398 DKC1O60832 514 aaKnown RBP eCLIP23.27■■□□□ 1.32
PKP4-209ENST00000479398 SPIRE1Q08AE8 756 aa23.27■■□□□ 1.32
PKP4-209ENST00000479398 GNL2Q13823 731 aaKnown RBP23.27■■□□□ 1.32
PKP4-209ENST00000479398 NOSTRINQ8IVI9 506 aa23.27■■□□□ 1.32
PKP4-209ENST00000479398 TTC12Q9H892 705 aaPredicted RBP23.27■■□□□ 1.32
PKP4-209ENST00000479398 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.26■■□□□ 1.31
PKP4-209ENST00000479398 GJB5O95377 273 aa23.26■■□□□ 1.31
PKP4-209ENST00000479398 CA3P07451 260 aa23.26■■□□□ 1.31
PKP4-209ENST00000479398 U2AF2P26368 475 aaKnown RBP eCLIP23.26■■□□□ 1.31
PKP4-209ENST00000479398 TMOD1P28289 359 aa23.26■■□□□ 1.31
PKP4-209ENST00000479398 MCM7P33993 719 aa23.26■■□□□ 1.31
PKP4-209ENST00000479398 TXKP42681 527 aa23.26■■□□□ 1.31
PKP4-209ENST00000479398 NCAPH2Q6IBW4 605 aa23.26■■□□□ 1.31
PKP4-209ENST00000479398 RAD9AQ99638 391 aa23.26■■□□□ 1.31
PKP4-209ENST00000479398 CDHR5Q9HBB8 845 aa23.26■■□□□ 1.31
PKP4-209ENST00000479398 SEPT9Q9UHD8 586 aaPredicted RBP23.26■■□□□ 1.31
PKP4-209ENST00000479398 ENPP3O14638 875 aa23.25■■□□□ 1.31
PKP4-209ENST00000479398 GJB2P29033 226 aa23.25■■□□□ 1.31
PKP4-209ENST00000479398 CD52P31358 61 aa23.25■■□□□ 1.31
PKP4-209ENST00000479398 TBC1D8BQ0IIM8 1120 aa23.25■■□□□ 1.31
PKP4-209ENST00000479398 ZNF174Q15697 407 aa23.25■■□□□ 1.31
PKP4-209ENST00000479398 MTERF2Q49AM1 385 aa23.25■■□□□ 1.31
PKP4-209ENST00000479398 PPP2R2DQ66LE6 453 aa23.25■■□□□ 1.31
PKP4-209ENST00000479398 MYOCDQ8IZQ8 938 aa23.25■■□□□ 1.31
PKP4-209ENST00000479398 LINC01465Q8N7H1 131 aa23.25■■□□□ 1.31
PKP4-209ENST00000479398 MYLIPQ8WY64 445 aa23.25■■□□□ 1.31
PKP4-209ENST00000479398 TOP1MTQ969P6 601 aa23.25■■□□□ 1.31
PKP4-209ENST00000479398 CEP89Q96ST8 783 aa23.25■■□□□ 1.31
PKP4-209ENST00000479398 TMEM60Q9H2L4 133 aa23.25■■□□□ 1.31
PKP4-209ENST00000479398 SUGCTQ9HAC7 445 aa23.25■■□□□ 1.31
PKP4-209ENST00000479398 RGL1Q9NZL6 768 aa23.25■■□□□ 1.31
PKP4-209ENST00000479398 GINS2Q9Y248 185 aa23.25■■□□□ 1.31
PKP4-209ENST00000479398 TMEM150BA6NC51 233 aa23.24■■□□□ 1.31
PKP4-209ENST00000479398 GPR32O75388 356 aa23.24■■□□□ 1.31
PKP4-209ENST00000479398 VTNP04004 478 aa23.24■■□□□ 1.31
PKP4-209ENST00000479398 CLCN3P51790 818 aa23.24■■□□□ 1.31
PKP4-209ENST00000479398 CRYBB1P53674 252 aaPredicted RBP23.24■■□□□ 1.31
PKP4-209ENST00000479398 ORC2Q13416 577 aaPredicted RBP23.24■■□□□ 1.31
PKP4-209ENST00000479398 FAM117BQ6P1L5 589 aa23.24■■□□□ 1.31
PKP4-209ENST00000479398 ANO5Q75V66 913 aa23.24■■□□□ 1.31
PKP4-209ENST00000479398 C4orf19Q8IY42 314 aa23.24■■□□□ 1.31
PKP4-209ENST00000479398 LRRC71Q8N4P6 559 aa23.24■■□□□ 1.31
PKP4-209ENST00000479398 DYDC2Q96IM9 177 aa23.24■■□□□ 1.31
PKP4-209ENST00000479398 WRAP73Q9P2S5 460 aaPredicted RBP23.24■■□□□ 1.31
PKP4-209ENST00000479398 PADI3Q9ULW8 664 aa23.24■■□□□ 1.31
PKP4-209ENST00000479398 SMC3Q9UQE7 1217 aa23.24■■□□□ 1.31
PKP4-209ENST00000479398 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.24■■□□□ 1.31
PKP4-209ENST00000479398 SLITRK3O94933 977 aa23.23■■□□□ 1.31
PKP4-209ENST00000479398 TRAPPC10P48553 1259 aa23.23■■□□□ 1.31
PKP4-209ENST00000479398 KIZQ2M2Z5 673 aa23.23■■□□□ 1.31
PKP4-209ENST00000479398 ZNF710Q8N1W2 664 aa23.23■■□□□ 1.31
PKP4-209ENST00000479398 MAP7D2Q96T17 732 aa23.23■■□□□ 1.31
PKP4-209ENST00000479398 SH2D3AQ9BRG2 576 aa23.23■■□□□ 1.31
PKP4-209ENST00000479398 ZSWIM4Q9H7M6 989 aa23.23■■□□□ 1.31
PKP4-209ENST00000479398 NOL7Q9UMY1 257 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms