RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 PCDHB7Q9Y5E2 793 aa12.58□□□□□ -0.4
HDLBP-237ENST00000479169 NFASCO94856 1347 aa12.58□□□□□ -0.4
HDLBP-237ENST00000479169 DDX39AO00148 427 aaKnown RBP12.57□□□□□ -0.4
HDLBP-237ENST00000479169 MAFGO15525 162 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 RPS6KA5O75582 802 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 FGF18O76093 207 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 CCNE2O96020 404 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 KLRC1P26715 233 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 PTPN5P54829 565 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 VCPP55072 806 aaKnown RBP12.57□□□□□ -0.4
HDLBP-237ENST00000479169 ERVFC1P60507 584 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 APOBRQ0VD83 1088 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 WWC2Q6AWC2 1192 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 MICU3Q86XE3 530 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 SUGP1Q8IWZ8 645 aaKnown RBP12.57□□□□□ -0.4
HDLBP-237ENST00000479169 FBXL6Q8N531 539 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 COLGALT1Q8NBJ5 622 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 ATP8B4Q8TF62 1192 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 SUSD6Q92537 303 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 TMEM87BQ96K49 555 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 AGO4Q9HCK5 861 aaKnown RBP12.57□□□□□ -0.4
HDLBP-237ENST00000479169 FAM86C1Q9NVL1 165 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 PCDHB12Q9Y5F1 795 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 CNTNAP5Q8WYK1 1306 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 PLXNA3P51805 1871 aa12.57□□□□□ -0.4
HDLBP-237ENST00000479169 SPTBN4Q9H254 2564 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 DENND3A2RUS2 1198 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 C9IYK1 514 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 FGFR1P11362 822 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 SP100P23497 879 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-237ENST00000479169 LIFRP42702 1097 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 UBE3AQ05086 875 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 DUSP6Q16828 381 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 PLPP4Q5VZY2 271 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 CCDC60Q8IWA6 550 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-237ENST00000479169 THNSL1Q8IYQ7 743 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 KIAA0319LQ8IZA0 1049 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 TMTC2Q8N394 836 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 NME8Q8N427 588 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 FANCBQ8NB91 859 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 TNPO1Q92973 898 aaKnown RBP12.56□□□□□ -0.4
HDLBP-237ENST00000479169 ASIC4Q96FT7 647 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 MTA3Q9BTC8 594 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 APOL5Q9BWW9 433 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 TYW1Q9NV66 732 aaKnown RBP12.56□□□□□ -0.4
HDLBP-237ENST00000479169 TMEM260Q9NX78 707 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 ST3GAL5Q9UNP4 418 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 SLC12A7Q9Y666 1083 aa12.56□□□□□ -0.4
HDLBP-237ENST00000479169 RIF1Q5UIP0 2472 aaKnown RBP12.55□□□□□ -0.4
HDLBP-237ENST00000479169 IGKV6D-21A0A0A0MT36 114 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 ZBTB42B2RXF5 422 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 BACH1O14867 736 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 FSCN2O14926 492 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 SLC27A2O14975 620 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 HBP1O60381 514 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 ATG7O95352 703 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 CALM1P0DP23 149 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 CALM2P0DP24 149 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 CALM3P0DP25 149 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 ATF7P17544 494 aaPredicted RBP12.55□□□□□ -0.4
HDLBP-237ENST00000479169 NAPAP54920 295 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 SIGLEC14Q08ET2 396 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 KIZQ2M2Z5 673 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 CEP55Q53EZ4 464 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 FAM228AQ86W67 206 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 YTHDC1Q96MU7 727 aaKnown RBP12.55□□□□□ -0.4
HDLBP-237ENST00000479169 NEK1Q96PY6 1258 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 OSMRQ99650 979 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 ANO3Q9BYT9 981 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 LSG1Q9H089 658 aaKnown RBP12.55□□□□□ -0.4
HDLBP-237ENST00000479169 CWH43Q9H720 699 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 RIC8AQ9NPQ8 531 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 AAASQ9NRG9 546 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 RGS18Q9NS28 235 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 C1orf112Q9NSG2 853 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 CDH22Q9UJ99 828 aa12.55□□□□□ -0.4
HDLBP-237ENST00000479169 DMDP11532 3685 aa12.54□□□□□ -0.4
HDLBP-237ENST00000479169 FAM186AA6NE01 2351 aa12.54□□□□□ -0.4
HDLBP-237ENST00000479169 MEIS1O00470 390 aa12.54□□□□□ -0.4
HDLBP-237ENST00000479169 VTNP04004 478 aa12.54□□□□□ -0.4
HDLBP-237ENST00000479169 ATP4AP20648 1035 aa12.54□□□□□ -0.4
HDLBP-237ENST00000479169 PBX3P40426 434 aa12.54□□□□□ -0.4
HDLBP-237ENST00000479169 TECP42680 631 aa12.54□□□□□ -0.4
HDLBP-237ENST00000479169 SLC26A2P50443 739 aa12.54□□□□□ -0.4
HDLBP-237ENST00000479169 KCNC3Q14003 757 aa12.54□□□□□ -0.4
HDLBP-237ENST00000479169 LLGL2Q6P1M3 1020 aa12.54□□□□□ -0.4
HDLBP-237ENST00000479169 PDXDC2PQ6P474 469 aa12.54□□□□□ -0.4
HDLBP-237ENST00000479169 SYCE2Q6PIF2 218 aa12.54□□□□□ -0.4
HDLBP-237ENST00000479169 ABHD15Q6UXT9 468 aa12.54□□□□□ -0.4
HDLBP-237ENST00000479169 SLC24A5Q71RS6 500 aa12.54□□□□□ -0.4
HDLBP-237ENST00000479169 TRMT1LQ7Z2T5 733 aaKnown RBP12.54□□□□□ -0.4
HDLBP-237ENST00000479169 CDCA3Q99618 268 aaPredicted RBP12.54□□□□□ -0.4
HDLBP-237ENST00000479169 S1PR5Q9H228 398 aa12.54□□□□□ -0.4
HDLBP-237ENST00000479169 ATP6V0A4Q9HBG4 840 aa12.54□□□□□ -0.4
HDLBP-237ENST00000479169 RNF19AQ9NV58 838 aa12.54□□□□□ -0.4
HDLBP-237ENST00000479169 COL1A2P08123 1366 aa12.54□□□□□ -0.4
HDLBP-237ENST00000479169 HIDE1A8MVS5 230 aa12.53□□□□□ -0.4
HDLBP-237ENST00000479169 C22orf31O95567 290 aa12.53□□□□□ -0.4
HDLBP-237ENST00000479169 PDGFBP01127 241 aaPredicted RBP12.53□□□□□ -0.4
HDLBP-237ENST00000479169 SREBF1P36956 1147 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms