RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 XP32Q5T750 250 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 TTC39BQ5VTQ0 682 aaPredicted RBP6.84□□□□□ -1.31
CMSS1-203ENST00000478909 FKBP1CQ5VVH2 108 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 IGF2-ASQ6U949 168 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 TMC6Q7Z403 805 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 FOXP4Q8IVH2 680 aaPredicted RBP6.84□□□□□ -1.31
CMSS1-203ENST00000478909 FAM114A1Q8IWE2 563 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 PDCL2Q8N4E4 241 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 IL22RA1Q8N6P7 574 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 C4orf32Q8N8J7 132 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 GMCL1P1Q8NEA9 526 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 DHX58Q96C10 678 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 SHISA4Q96DD7 197 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 DHTKD1Q96HY7 919 aaPredicted RBP6.84□□□□□ -1.31
CMSS1-203ENST00000478909 ZNF830Q96NB3 372 aaPredicted RBP6.84□□□□□ -1.31
CMSS1-203ENST00000478909 TUBB2BQ9BVA1 445 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 SSBP4Q9BWG4 385 aaPredicted RBP6.84□□□□□ -1.31
CMSS1-203ENST00000478909 PDCL3Q9H2J4 239 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 TMX1Q9H3N1 280 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 KANSL2Q9H9L4 492 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 RIC8AQ9NPQ8 531 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 KBTBD4Q9NVX7 518 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 ABI2Q9NYB9 513 aaPredicted RBP6.84□□□□□ -1.31
CMSS1-203ENST00000478909 NYAP2Q9P242 653 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 PI4KBQ9UBF8 816 aa6.84□□□□□ -1.31
CMSS1-203ENST00000478909 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.84□□□□□ -1.315e-7■■■■□ 19.4
CMSS1-203ENST00000478909 ZNF646O15015 1829 aaPredicted RBP6.84□□□□□ -1.31
CMSS1-203ENST00000478909 PHLPP2Q6ZVD8 1323 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 KDM3AQ9Y4C1 1321 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 SMCO2A6NFE2 343 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 UBE2Q2LH0YL09 131 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 DLL1O00548 723 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 CYTH3O43739 400 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 RHOBTB3O94955 611 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 FGFR1OPO95684 399 aaKnown RBP6.83□□□□□ -1.32
CMSS1-203ENST00000478909 FOSP01100 380 aaPredicted RBP6.83□□□□□ -1.32
CMSS1-203ENST00000478909 MMP10P09238 476 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 TNNT1P13805 278 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 BMP6P22004 513 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 MCM7P33993 719 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 HYAL2Q12891 473 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 PAK1Q13153 545 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 TBX2Q13207 712 aaPredicted RBP6.83□□□□□ -1.32
CMSS1-203ENST00000478909 NR1I3Q14994 352 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 RRAGBQ5VZM2 374 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 CEP135Q66GS9 1140 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 APOBEC3HQ6NTF7 200 aaKnown RBP6.83□□□□□ -1.32
CMSS1-203ENST00000478909 ARHGAP27Q6ZUM4 889 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 TMEM179Q6ZVK1 233 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 COL23A1Q86Y22 540 aaPredicted RBP6.83□□□□□ -1.32
CMSS1-203ENST00000478909 Q8N3U1 123 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 IGSF22Q8N9C0 903 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 RETREG2Q8NC44 543 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 WFDC12Q8WWY7 111 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 CUL5Q93034 780 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 MTMR8Q96EF0 704 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 DYNLL2Q96FJ2 89 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 CALML4Q96GE6 196 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 EPSTI1Q96J88 318 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 THAP9Q9H5L6 903 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 USP40Q9NVE5 1235 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 FANCLQ9NW38 375 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 LIMA1Q9UHB6 759 aaKnown RBP6.83□□□□□ -1.32
CMSS1-203ENST00000478909 NRBP1Q9UHY1 535 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 HERC5Q9UII4 1024 aaKnown RBP6.83□□□□□ -1.32
CMSS1-203ENST00000478909 MYH4Q9Y623 1939 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 ARFGEF1Q9Y6D6 1849 aa6.83□□□□□ -1.32
CMSS1-203ENST00000478909 BAZ2BQ9UIF8 2168 aaKnown RBP6.82□□□□□ -1.32
CMSS1-203ENST00000478909 PVALEFA0A1B0GWK0 134 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 A0A1W2PQC6 194 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 ZBTB5O15062 677 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 TBX3O15119 743 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 KIF20AO95235 890 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 RPN1P04843 607 aaKnown RBP6.82□□□□□ -1.32
CMSS1-203ENST00000478909 H2AFB1P0C5Y9 115 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 H2AFB2P0C5Z0 115 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 ATP2B1P20020 1258 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 RXRBP28702 533 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 NOS3P29474 1203 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 SHMT1P34896 483 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 CRKP46108 304 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 IREB2P48200 963 aaKnown RBP6.82□□□□□ -1.32
CMSS1-203ENST00000478909 USP11P51784 963 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 ATP11AP98196 1134 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 GRIN1Q05586 938 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 LRMPQ12912 555 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 PSMD2Q13200 908 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 SETDB1Q15047 1291 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 ZNF827Q17R98 1081 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 EARS2Q5JPH6 523 aaKnown RBP6.82□□□□□ -1.32
CMSS1-203ENST00000478909 DACT2Q5SW24 774 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 PDE12Q6L8Q7 609 aaKnown RBP6.82□□□□□ -1.32
CMSS1-203ENST00000478909 CDC42EP5Q6NZY7 148 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 ARMCX5Q6P1M9 558 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 TATDN1Q6P1N9 297 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 PPFIBP1Q86W92 1011 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 SLFN12Q8IYM2 578 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 RTKN2Q8IZC4 609 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 PDILTQ8N807 584 aa6.82□□□□□ -1.32
CMSS1-203ENST00000478909 GIMAP8Q8ND71 665 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms