RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 UTP14CQ5TAP6 766 aaKnown RBP13.07□□□□□ -0.32
PDCD11-204ENST00000478543 SWSAP1Q6NVH7 229 aa13.07□□□□□ -0.32
PDCD11-204ENST00000478543 CAVIN1Q6NZI2 390 aaKnown RBP13.07□□□□□ -0.32
PDCD11-204ENST00000478543 TLK2Q86UE8 772 aa13.07□□□□□ -0.32
PDCD11-204ENST00000478543 CCDC60Q8IWA6 550 aaPredicted RBP13.07□□□□□ -0.32
PDCD11-204ENST00000478543 RDM1Q8NG50 284 aa13.07□□□□□ -0.32
PDCD11-204ENST00000478543 NEK9Q8TD19 979 aa13.07□□□□□ -0.32
PDCD11-204ENST00000478543 LRRC15Q8TF66 581 aa13.07□□□□□ -0.32
PDCD11-204ENST00000478543 AFG1LQ8WV93 481 aa13.07□□□□□ -0.32
PDCD11-204ENST00000478543 GPR20Q99678 358 aa13.07□□□□□ -0.32
PDCD11-204ENST00000478543 HSD17B14Q9BPX1 270 aa13.07□□□□□ -0.32
PDCD11-204ENST00000478543 TUFT1Q9NNX1 390 aa13.07□□□□□ -0.32
PDCD11-204ENST00000478543 GABBR1Q9UBS5 961 aa13.07□□□□□ -0.32
PDCD11-204ENST00000478543 PHF24Q9UPV7 400 aa13.07□□□□□ -0.32
PDCD11-204ENST00000478543 E9PMD0 336 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 SLC26A4O43511 780 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 ACTN4O43707 911 aaKnown RBP13.06□□□□□ -0.32
PDCD11-204ENST00000478543 P4HBP07237 508 aaKnown RBP13.06□□□□□ -0.32
PDCD11-204ENST00000478543 RAG1P15918 1043 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 TCF7P36402 384 aaPredicted RBP13.06□□□□□ -0.32
PDCD11-204ENST00000478543 IRX5P78411 483 aaPredicted RBP13.06□□□□□ -0.32
PDCD11-204ENST00000478543 MRPS5P82675 430 aaKnown RBP13.06□□□□□ -0.32
PDCD11-204ENST00000478543 TFF2Q03403 129 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 FPGSQ05932 587 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 DHX8Q14562 1220 aaKnown RBP13.06□□□□□ -0.32
PDCD11-204ENST00000478543 E2F4Q16254 413 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 HYIQ5T013 277 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 RASIP1Q5U651 963 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 KRBA2Q6ZNG9 492 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 TRMT1LQ7Z2T5 733 aaKnown RBP13.06□□□□□ -0.32
PDCD11-204ENST00000478543 KCNK18Q7Z418 384 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 GRAMD1CQ8IYS0 662 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 CEP57L1Q8IYX8 460 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 IQUBQ8NA54 791 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 CNNM3Q8NE01 707 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 SEPT1Q8WYJ6 367 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 PYM1Q9BRP8 204 aaKnown RBP13.06□□□□□ -0.32
PDCD11-204ENST00000478543 NT5C3AQ9H0P0 336 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 AP5M1Q9H0R1 490 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 EPHX3Q9H6B9 360 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 ZNF302Q9NR11 478 aa13.06□□□□□ -0.32
PDCD11-204ENST00000478543 WRAP73Q9P2S5 460 aaPredicted RBP13.06□□□□□ -0.32
PDCD11-204ENST00000478543 GNEQ9Y223 722 aaKnown RBP13.06□□□□□ -0.32
PDCD11-204ENST00000478543 A0A1W2PQ45 241 aaPredicted RBP13.05□□□□□ -0.32
PDCD11-204ENST00000478543 A0A1W2PQY0 241 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 ATG7O95352 703 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 PGK1P00558 417 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 SSBP05455 408 aaKnown RBP eCLIP13.05□□□□□ -0.32
PDCD11-204ENST00000478543 BMP1P13497 986 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 QARSP47897 775 aaKnown RBP13.05□□□□□ -0.32
PDCD11-204ENST00000478543 PSMC5P62195 406 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 PSMC6P62333 389 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 MCM6Q14566 821 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 CAMK4Q16566 473 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 NAALADL2Q58DX5 795 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 FAM160B1Q5W0V3 765 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 PDXDC2PQ6P474 469 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 TRIM50Q86XT4 487 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 PPTC7Q8NI37 304 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 PIGOQ8TEQ8 1089 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 RAD54LQ92698 747 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 STAMQ92783 540 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 KHSRPQ92945 711 aaKnown RBP eCLIP13.05□□□□□ -0.32
PDCD11-204ENST00000478543 EMID1Q96A84 441 aaPredicted RBP13.05□□□□□ -0.32
PDCD11-204ENST00000478543 PCYT2Q99447 389 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 LRFN3Q9BTN0 628 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 NUP62CLQ9H1M0 184 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 CLSTN2Q9H4D0 955 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 ZSWIM4Q9H7M6 989 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 BLOC1S4Q9NUP1 217 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 TMEM63CQ9P1W3 806 aa13.05□□□□□ -0.32
PDCD11-204ENST00000478543 ZBTB39O15060 712 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 ZNF862O60290 1169 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 MMP3P08254 477 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 SLFN14P0C7P3 912 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 ZNF286BP0CG31 522 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 RARBP10826 455 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 AFMP43652 599 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 KCNQ1P51787 676 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 BEX3Q00994 111 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 TMEM240Q5SV17 173 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 CCDC183Q5T5S1 534 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 CKAP2LQ8IYA6 745 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 LARP4BQ92615 738 aaKnown RBP13.04□□□□□ -0.32
PDCD11-204ENST00000478543 GLG1Q92896 1179 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 ATP6V0A1Q93050 837 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 TIGD1Q96MW7 591 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 GAS2L1Q99501 681 aaPredicted RBP13.04□□□□□ -0.32
PDCD11-204ENST00000478543 AZI2Q9H6S1 392 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 C11orf16Q9NQ32 467 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 TMEM39AQ9NV64 488 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 STK17AQ9UEE5 414 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 USP25Q9UHP3 1055 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 DNM3Q9UQ16 869 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 IGSF9BQ9UPX0 1349 aa13.04□□□□□ -0.32
PDCD11-204ENST00000478543 IGKV6D-21A0A0A0MT36 114 aa13.03□□□□□ -0.32
PDCD11-204ENST00000478543 TMEM150BA6NC51 233 aa13.03□□□□□ -0.32
PDCD11-204ENST00000478543 MYADML2A6NDP7 307 aa13.03□□□□□ -0.32
PDCD11-204ENST00000478543 DUSP11O75319 330 aaKnown RBP13.03□□□□□ -0.32
PDCD11-204ENST00000478543 LGR5O75473 907 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms