RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ANKS1AQ92625 1134 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 SHISA4Q96DD7 197 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 GSDMAQ96QA5 445 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 CTAGE1Q96RT6 745 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 SRRTQ9BXP5 876 aaKnown RBP5.57□□□□□ -1.52
SF3B6-202ENST00000478050 L2HGDHQ9H9P8 463 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 DCP1AQ9NPI6 582 aaPredicted RBP5.57□□□□□ -1.52
SF3B6-202ENST00000478050 SH3GLB2Q9NR46 395 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 SEPT3Q9UH03 358 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 EGFL7Q9UHF1 273 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 CCNL1Q9UK58 526 aaPredicted RBP5.57□□□□□ -1.52
SF3B6-202ENST00000478050 ABT1Q9ULW3 272 aaKnown RBP5.57□□□□□ -1.52
SF3B6-202ENST00000478050 NFE2L3Q9Y4A8 694 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 CASP8AP2Q9UKL3 1982 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 SYNRGQ9UMZ2 1314 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 IRS2Q9Y4H2 1338 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 TSPY2A6NKD2 308 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 TMEM232C9JQI7 657 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 FSCN2O14926 492 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 STX10O60499 249 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 PRDM1O75626 825 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 LDHCP07864 332 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 HOXD8P13378 290 aaPredicted RBP5.56□□□□□ -1.52
SF3B6-202ENST00000478050 LONP1P36776 959 aaKnown RBP5.56□□□□□ -1.52
SF3B6-202ENST00000478050 NLRP5P59047 1200 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 FMR1Q06787 632 aaKnown RBP eCLIP5.56□□□□□ -1.52
SF3B6-202ENST00000478050 GRM1Q13255 1194 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 GRM4Q14833 912 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 NPY5RQ15761 445 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 FILIP1LQ4L180 1135 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 SPATA1Q5VX52 437 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 ARL6IP4Q66PJ3 421 aaKnown RBP5.56□□□□□ -1.52
SF3B6-202ENST00000478050 SPECC1LQ69YQ0 1117 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 GALNT17Q6IS24 598 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 SYT10Q6XYQ8 523 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 DGKHQ86XP1 1220 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 DZIP1Q86YF9 867 aaKnown RBP5.56□□□□□ -1.52
SF3B6-202ENST00000478050 HOMER1Q86YM7 354 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 TREML1Q86YW5 311 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 TP53INP2Q8IXH6 220 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 SRBD1Q8N5C6 995 aaKnown RBP5.56□□□□□ -1.52
SF3B6-202ENST00000478050 PDILTQ8N807 584 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 IQUBQ8NA54 791 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 CCDC148Q8NFR7 591 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 DHX58Q96C10 678 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 PAGE5Q96GU1 130 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 MFSD14AQ96MC6 490 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 BAG1Q99933 345 aaPredicted RBP5.56□□□□□ -1.52
SF3B6-202ENST00000478050 KAT14Q9H8E8 782 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 TCP11L1Q9NUJ3 509 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 INTS13Q9NVM9 706 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 RMND1Q9NWS8 449 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 OGFRQ9NZT2 677 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 ZNF215Q9UL58 517 aaPredicted RBP5.56□□□□□ -1.52
SF3B6-202ENST00000478050 MYH7BA7E2Y1 1941 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 MYH4Q9Y623 1939 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 TRIOBPQ9H2D6 2365 aa5.56□□□□□ -1.52
SF3B6-202ENST00000478050 CACNA1AO00555 2505 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 XDHP47989 1333 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 ITIH6Q6UXX5 1313 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 PASKQ96RG2 1323 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 AKR1B15C9JRZ8 316 aaPredicted RBP5.55□□□□□ -1.52
SF3B6-202ENST00000478050 SMIM22K7EJ46 135 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 BAG3O95817 575 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 LDHBP07195 334 aaKnown RBP5.55□□□□□ -1.52
SF3B6-202ENST00000478050 TPM1P09493 284 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 CYP2D6P10635 497 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 KLRK1P26718 216 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 PRDX5P30044 214 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 USP5P45974 858 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 SPAG1Q07617 926 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 HYAL2Q12891 473 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 GRAPQ13588 217 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 CUL4BQ13620 913 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 NR1I3Q14994 352 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 ZNF174Q15697 407 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 CCDC93Q567U6 631 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 EARS2Q5JPH6 523 aaKnown RBP5.55□□□□□ -1.52
SF3B6-202ENST00000478050 FAM47AQ5JRC9 791 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 C12orf60Q5U649 245 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 CDKAL1Q5VV42 579 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 ANKRD34AQ69YU3 496 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 CAPN12Q6ZSI9 719 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 C15orf52Q6ZUT6 534 aaKnown RBP5.55□□□□□ -1.52
SF3B6-202ENST00000478050 USP49Q70CQ1 688 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 ZNF804AQ7Z570 1209 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 PPFIBP1Q86W92 1011 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 TMEM139Q8IV31 216 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 REXO1L1PQ8IX06 675 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 GRAMD1CQ8IYS0 662 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 BLIDQ8IZY5 108 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 TC2NQ8N9U0 490 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 DAGLBQ8NCG7 672 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 ANKRD20A12PQ8NF67 263 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 GRAPLQ8TC17 118 aaPredicted RBP5.55□□□□□ -1.52
SF3B6-202ENST00000478050 CCDC51Q96ER9 411 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 EPSTI1Q96J88 318 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 CAPNS2Q96L46 248 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 FBXL18Q96ME1 805 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 GPR101Q96P66 508 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms