RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 HBP1O60381 514 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 LYPLA2O95372 231 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 PLCG1P19174 1290 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 MUTP22033 750 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 YWHABP31946 246 aaKnown RBP17.12■□□□□ 0.33
SEC13-215ENST00000477547 ECM1Q16610 540 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 TMEM119Q4V9L6 283 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 HYIQ5T013 277 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 RESP18Q5W5W9 173 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 PLA2G4FQ68DD2 849 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 CLEC17AQ6ZS10 378 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 FAM161BQ96MY7 647 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 PNMA5Q96PV4 448 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 PLIN2Q99541 437 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 NT5C3AQ9H0P0 336 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 FAM13BQ9NYF5 915 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 CCDC39Q9UFE4 941 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 KIAA1024Q9UPX6 916 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 GRIN2DO15399 1336 aa17.11■□□□□ 0.33
SEC13-215ENST00000477547 GOLGA6L4A6NEF3 574 aa17.11■□□□□ 0.33
SEC13-215ENST00000477547 ATN1P54259 1190 aaPredicted RBP17.11■□□□□ 0.33
SEC13-215ENST00000477547 IGBP1P78318 339 aa17.11■□□□□ 0.33
SEC13-215ENST00000477547 MDM2Q00987 491 aaPredicted RBP17.11■□□□□ 0.33
SEC13-215ENST00000477547 GRIK4Q16099 956 aa17.11■□□□□ 0.33
SEC13-215ENST00000477547 MTERF2Q49AM1 385 aa17.11■□□□□ 0.33
SEC13-215ENST00000477547 ADALQ6DHV7 355 aa17.11■□□□□ 0.33
SEC13-215ENST00000477547 NFRKBQ6P4R8 1299 aa17.11■□□□□ 0.33
SEC13-215ENST00000477547 LMBR1Q8WVP7 490 aa17.11■□□□□ 0.33
SEC13-215ENST00000477547 HDAC6Q9UBN7 1215 aa17.11■□□□□ 0.33
SEC13-215ENST00000477547 A0A1W2PQ27 194 aa17.1■□□□□ 0.33
SEC13-215ENST00000477547 A0A1W2PQ64 194 aa17.1■□□□□ 0.33
SEC13-215ENST00000477547 A0A1W2PQD8 194 aa17.1■□□□□ 0.33
SEC13-215ENST00000477547 DDX11L8A8MPP1 907 aa17.1■□□□□ 0.33
SEC13-215ENST00000477547 STBD1O95210 358 aa17.1■□□□□ 0.33
SEC13-215ENST00000477547 INSRRP14616 1297 aa17.1■□□□□ 0.33
SEC13-215ENST00000477547 PFKFB1P16118 471 aa17.1■□□□□ 0.33
SEC13-215ENST00000477547 ANO5Q75V66 913 aa17.1■□□□□ 0.33
SEC13-215ENST00000477547 SESTD1Q86VW0 696 aa17.1■□□□□ 0.33
SEC13-215ENST00000477547 PDILTQ8N807 584 aa17.1■□□□□ 0.33
SEC13-215ENST00000477547 FSIP1Q8NA03 581 aa17.1■□□□□ 0.33
SEC13-215ENST00000477547 PIGOQ8TEQ8 1089 aa17.1■□□□□ 0.33
SEC13-215ENST00000477547 TRAPPC12Q8WVT3 735 aa17.1■□□□□ 0.33
SEC13-215ENST00000477547 MRPS27Q92552 414 aaKnown RBP17.1■□□□□ 0.33
SEC13-215ENST00000477547 NACC1Q96RE7 527 aa17.1■□□□□ 0.33
SEC13-215ENST00000477547 NRBP2Q9NSY0 501 aa17.1■□□□□ 0.33
SEC13-215ENST00000477547 GTF2IRD1Q9UHL9 959 aa17.1■□□□□ 0.33
SEC13-215ENST00000477547 MROH7Q68CQ1 1323 aa17.09■□□□□ 0.33
SEC13-215ENST00000477547 NRCAMQ92823 1304 aa17.09■□□□□ 0.33
SEC13-215ENST00000477547 A0A087X0B3 334 aa17.09■□□□□ 0.33
SEC13-215ENST00000477547 C17orf102A2RUQ5 167 aa17.09■□□□□ 0.33
SEC13-215ENST00000477547 ARVCFO00192 962 aa17.09■□□□□ 0.33
SEC13-215ENST00000477547 CMA1P23946 247 aa17.09■□□□□ 0.33
SEC13-215ENST00000477547 STAT6P42226 847 aa17.09■□□□□ 0.33
SEC13-215ENST00000477547 PTPN11Q06124 597 aaPredicted RBP17.09■□□□□ 0.33
SEC13-215ENST00000477547 SNX17Q15036 470 aa17.09■□□□□ 0.33
SEC13-215ENST00000477547 XKR9Q5GH70 373 aa17.09■□□□□ 0.33
SEC13-215ENST00000477547 CCDC73Q6ZRK6 1079 aa17.09■□□□□ 0.33
SEC13-215ENST00000477547 OTUD6AQ7L8S5 288 aa17.09■□□□□ 0.33
SEC13-215ENST00000477547 KCNK18Q7Z418 384 aa17.09■□□□□ 0.33
SEC13-215ENST00000477547 SH2D3AQ9BRG2 576 aa17.09■□□□□ 0.33
SEC13-215ENST00000477547 ANKEF1Q9NU02 776 aa17.09■□□□□ 0.33
SEC13-215ENST00000477547 SETD4Q9NVD3 440 aa17.09■□□□□ 0.33
SEC13-215ENST00000477547 STK17AQ9UEE5 414 aa17.09■□□□□ 0.33
SEC13-215ENST00000477547 TUBE1Q9UJT0 475 aa17.09■□□□□ 0.33
SEC13-215ENST00000477547 DBR1Q9UK59 544 aaKnown RBP17.09■□□□□ 0.33
SEC13-215ENST00000477547 A0A087WWV3 80 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 A0A1B0GVL5 298 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 ARHGEF35A5YM69 484 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 RRN3P2A6NIE6 340 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 ZBTB42B2RXF5 422 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 E9PMD0 336 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 GOLGA6L22H0YM25 854 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 ZBTB39O15060 712 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 HOXC8P31273 242 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 RARRES1P49788 294 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 NPEPPSP55786 919 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 TRIM60Q495X7 471 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 ZNF484Q5JVG2 852 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 RRAGBQ5VZM2 374 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 GDF6Q6KF10 455 aaPredicted RBP17.08■□□□□ 0.32
SEC13-215ENST00000477547 SLC39A5Q6ZMH5 540 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 SLC43A3Q8NBI5 491 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 LRRC15Q8TF66 581 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 CEP170P1Q96L14 293 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 NIFKQ9BYG3 293 aaKnown RBP17.08■□□□□ 0.32
SEC13-215ENST00000477547 SEZ6LQ9BYH1 1024 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 BHMT2Q9H2M3 363 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 GOLPH3LQ9H4A5 285 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 CYP26B1Q9NR63 512 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 BMP2KQ9NSY1 1161 aaPredicted RBP17.08■□□□□ 0.32
SEC13-215ENST00000477547 DNM3Q9UQ16 869 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 LTBP2Q14767 1821 aa17.08■□□□□ 0.32
SEC13-215ENST00000477547 USO1O60763 962 aaKnown RBP17.07■□□□□ 0.32
SEC13-215ENST00000477547 PQBP1O60828 265 aaKnown RBP17.07■□□□□ 0.32
SEC13-215ENST00000477547 EYA4O95677 639 aa17.07■□□□□ 0.32
SEC13-215ENST00000477547 SSBP05455 408 aaKnown RBP eCLIP17.07■□□□□ 0.32
SEC13-215ENST00000477547 GNAT1P11488 350 aa17.07■□□□□ 0.32
SEC13-215ENST00000477547 RTP1P59025 263 aa17.07■□□□□ 0.32
SEC13-215ENST00000477547 TBC1D8BQ0IIM8 1120 aa17.07■□□□□ 0.32
SEC13-215ENST00000477547 HIC1Q14526 733 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms