RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 ACTN4O43707 911 aaKnown RBP18.05■□□□□ 0.48
VHL-203ENST00000477538 SSBP05455 408 aaKnown RBP eCLIP18.05■□□□□ 0.48
VHL-203ENST00000477538 PLA2G4BP0C869 781 aa18.05■□□□□ 0.48
VHL-203ENST00000477538 RARRES1P49788 294 aa18.05■□□□□ 0.48
VHL-203ENST00000477538 MCM6Q14566 821 aa18.05■□□□□ 0.48
VHL-203ENST00000477538 LONRF3Q496Y0 759 aa18.05■□□□□ 0.48
VHL-203ENST00000477538 XKR9Q5GH70 373 aa18.05■□□□□ 0.48
VHL-203ENST00000477538 SH2D3AQ9BRG2 576 aa18.05■□□□□ 0.48
VHL-203ENST00000477538 NIFKQ9BYG3 293 aaKnown RBP18.05■□□□□ 0.48
VHL-203ENST00000477538 BHMT2Q9H2M3 363 aa18.05■□□□□ 0.48
VHL-203ENST00000477538 MAGEF1Q9HAY2 307 aa18.05■□□□□ 0.48
VHL-203ENST00000477538 DACT1Q9NYF0 836 aa18.05■□□□□ 0.48
VHL-203ENST00000477538 COL1A2P08123 1366 aa18.04■□□□□ 0.48
VHL-203ENST00000477538 A0A1W2PQ45 241 aaPredicted RBP18.04■□□□□ 0.48
VHL-203ENST00000477538 A0A1W2PQY0 241 aa18.04■□□□□ 0.48
VHL-203ENST00000477538 ARHGEF35A5YM69 484 aa18.04■□□□□ 0.48
VHL-203ENST00000477538 KINO60870 393 aaKnown RBP18.04■□□□□ 0.48
VHL-203ENST00000477538 SLFN14P0C7P3 912 aa18.04■□□□□ 0.48
VHL-203ENST00000477538 NPEPPSP55786 919 aa18.04■□□□□ 0.48
VHL-203ENST00000477538 DHX8Q14562 1220 aaKnown RBP18.04■□□□□ 0.48
VHL-203ENST00000477538 MTERF2Q49AM1 385 aa18.04■□□□□ 0.48
VHL-203ENST00000477538 KRBA2Q6ZNG9 492 aa18.04■□□□□ 0.48
VHL-203ENST00000477538 CNNM3Q8NE01 707 aa18.04■□□□□ 0.48
VHL-203ENST00000477538 CEP170P1Q96L14 293 aa18.04■□□□□ 0.48
VHL-203ENST00000477538 GLT1D1Q96MS3 346 aa18.04■□□□□ 0.48
VHL-203ENST00000477538 CYP26B1Q9NR63 512 aa18.04■□□□□ 0.48
VHL-203ENST00000477538 SMIM10L2AP0DMW4 78 aa18.03■□□□□ 0.48
VHL-203ENST00000477538 SMIM10L2BP0DMW5 78 aa18.03■□□□□ 0.48
VHL-203ENST00000477538 INSRRP14616 1297 aa18.03■□□□□ 0.48
VHL-203ENST00000477538 SLC12A3P55017 1021 aa18.03■□□□□ 0.48
VHL-203ENST00000477538 PPFIA1Q13136 1202 aa18.03■□□□□ 0.48
VHL-203ENST00000477538 NBPF20Q3BBV1 942 aa18.03■□□□□ 0.48
VHL-203ENST00000477538 ZNF484Q5JVG2 852 aa18.03■□□□□ 0.48
VHL-203ENST00000477538 COL13A1Q5TAT6 717 aaPredicted RBP18.03■□□□□ 0.48
VHL-203ENST00000477538 SV2BQ7L1I2 683 aa18.03■□□□□ 0.48
VHL-203ENST00000477538 SYT2Q8N9I0 419 aaPredicted RBP18.03■□□□□ 0.48
VHL-203ENST00000477538 ANKLE1Q8NAG6 615 aa18.03■□□□□ 0.48
VHL-203ENST00000477538 PPP1R13LQ8WUF5 828 aa18.03■□□□□ 0.48
VHL-203ENST00000477538 VTI1AQ96AJ9 217 aa18.03■□□□□ 0.48
VHL-203ENST00000477538 TIGD1Q96MW7 591 aa18.03■□□□□ 0.48
VHL-203ENST00000477538 ALPK3Q96L96 1907 aa18.03■□□□□ 0.48
VHL-203ENST00000477538 ZBTB42B2RXF5 422 aa18.02■□□□□ 0.48
VHL-203ENST00000477538 CAPN2P17655 700 aa18.02■□□□□ 0.48
VHL-203ENST00000477538 TARBP2Q15633 366 aaKnown RBP18.02■□□□□ 0.48
VHL-203ENST00000477538 GRIK4Q16099 956 aa18.02■□□□□ 0.48
VHL-203ENST00000477538 GPBP1Q86WP2 473 aa18.02■□□□□ 0.48
VHL-203ENST00000477538 C7orf31Q8N865 590 aa18.02■□□□□ 0.48
VHL-203ENST00000477538 STAMQ92783 540 aa18.02■□□□□ 0.48
VHL-203ENST00000477538 CCDC34Q96HJ3 373 aa18.02■□□□□ 0.48
VHL-203ENST00000477538 TNMDQ9H2S6 317 aa18.02■□□□□ 0.48
VHL-203ENST00000477538 STARD7Q9NQZ5 370 aa18.02■□□□□ 0.48
VHL-203ENST00000477538 KBTBD4Q9NVX7 518 aa18.02■□□□□ 0.48
VHL-203ENST00000477538 PPME1Q9Y570 386 aa18.02■□□□□ 0.48
VHL-203ENST00000477538 RRN3P2A6NIE6 340 aa18.01■□□□□ 0.47
VHL-203ENST00000477538 USO1O60763 962 aaKnown RBP18.01■□□□□ 0.47
VHL-203ENST00000477538 AFMP43652 599 aa18.01■□□□□ 0.47
VHL-203ENST00000477538 MNX1P50219 401 aaPredicted RBP18.01■□□□□ 0.47
VHL-203ENST00000477538 IGBP1P78318 339 aa18.01■□□□□ 0.47
VHL-203ENST00000477538 TBC1D8BQ0IIM8 1120 aa18.01■□□□□ 0.47
VHL-203ENST00000477538 ITGA7Q13683 1181 aa18.01■□□□□ 0.47
VHL-203ENST00000477538 KANK3Q6NY19 840 aa18.01■□□□□ 0.47
VHL-203ENST00000477538 PADI6Q6TGC4 694 aa18.01■□□□□ 0.47
VHL-203ENST00000477538 GRAMD1CQ8IYS0 662 aa18.01■□□□□ 0.47
VHL-203ENST00000477538 TRAPPC12Q8WVT3 735 aa18.01■□□□□ 0.47
VHL-203ENST00000477538 CEP89Q96ST8 783 aa18.01■□□□□ 0.47
VHL-203ENST00000477538 RUSC1Q9BVN2 902 aa18.01■□□□□ 0.47
VHL-203ENST00000477538 SETD4Q9NVD3 440 aa18.01■□□□□ 0.47
VHL-203ENST00000477538 HDAC6Q9UBN7 1215 aa18.01■□□□□ 0.47
VHL-203ENST00000477538 GRIN2DO15399 1336 aa18■□□□□ 0.47
VHL-203ENST00000477538 NRCAMQ92823 1304 aa18■□□□□ 0.47
VHL-203ENST00000477538 SIP14410 1827 aa18■□□□□ 0.47
VHL-203ENST00000477538 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18■□□□□ 0.47
VHL-203ENST00000477538 A0A0U1RQG5 324 aaPredicted RBP18■□□□□ 0.47
VHL-203ENST00000477538 DGAT1O75907 488 aa18■□□□□ 0.47
VHL-203ENST00000477538 CYP11B2P19099 503 aa18■□□□□ 0.47
VHL-203ENST00000477538 RFC5P40937 340 aa18■□□□□ 0.47
VHL-203ENST00000477538 POLGP54098 1239 aaPredicted RBP18■□□□□ 0.47
VHL-203ENST00000477538 AMPD3Q01432 767 aa18■□□□□ 0.47
VHL-203ENST00000477538 FAM47CQ5HY64 1035 aa18■□□□□ 0.47
VHL-203ENST00000477538 RINT1Q6NUQ1 792 aa18■□□□□ 0.47
VHL-203ENST00000477538 NFRKBQ6P4R8 1299 aa18■□□□□ 0.47
VHL-203ENST00000477538 LMBR1Q8WVP7 490 aa18■□□□□ 0.47
VHL-203ENST00000477538 PAGE5Q96GU1 130 aa18■□□□□ 0.47
VHL-203ENST00000477538 MTRQ99707 1265 aa18■□□□□ 0.47
VHL-203ENST00000477538 LRRC27Q9C0I9 530 aa18■□□□□ 0.47
VHL-203ENST00000477538 BMP2KQ9NSY1 1161 aaPredicted RBP18■□□□□ 0.47
VHL-203ENST00000477538 KCND2Q9NZV8 630 aa18■□□□□ 0.47
VHL-203ENST00000477538 GTF2IRD1Q9UHL9 959 aa18■□□□□ 0.47
VHL-203ENST00000477538 C17orf102A2RUQ5 167 aa17.99■□□□□ 0.47
VHL-203ENST00000477538 MYMKA6NI61 221 aa17.99■□□□□ 0.47
VHL-203ENST00000477538 EMC2Q15006 297 aa17.99■□□□□ 0.47
VHL-203ENST00000477538 C1orf186Q6ZWK4 172 aa17.99■□□□□ 0.47
VHL-203ENST00000477538 SH3RF1Q7Z6J0 888 aa17.99■□□□□ 0.47
VHL-203ENST00000477538 SESTD1Q86VW0 696 aa17.99■□□□□ 0.47
VHL-203ENST00000477538 EXOC8Q8IYI6 725 aa17.99■□□□□ 0.47
VHL-203ENST00000477538 DIS3LQ8TF46 1054 aaKnown RBP17.99■□□□□ 0.47
VHL-203ENST00000477538 SLC7A3Q8WY07 619 aa17.99■□□□□ 0.47
VHL-203ENST00000477538 DHX33Q9H6R0 707 aaKnown RBP17.99■□□□□ 0.47
VHL-203ENST00000477538 ATP6V0A4Q9HBG4 840 aa17.99■□□□□ 0.47
VHL-203ENST00000477538 MAGEB2O15479 319 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms