RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 PRICKLE2Q7Z3G6 844 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 RALYLQ86SE5 291 aaKnown RBP8.39□□□□□ -1.07
BRCA1-214ENST00000477152 TBC1D10CQ8IV04 446 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 TAAR1Q96RJ0 339 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 GCOM1H8Y6P7 765 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-214ENST00000477152 ZBTB5O15062 677 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 SPINT1O43278 529 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 AMHP03971 560 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 POLR2MP0CAP2 368 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 BMP2P12643 396 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 EIF2AK2P19525 551 aaKnown RBP8.39□□□□□ -1.07
BRCA1-214ENST00000477152 PLA2G4AP47712 749 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 RBL2Q08999 1139 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 ADGRE1Q14246 886 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 LY6KQ17RY6 165 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 RASGRP2Q7LDG7 609 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 ARNTL2Q8WYA1 636 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 COPS5Q92905 334 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 CUL5Q93034 780 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 SAMD11Q96NU1 681 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 PHACTR1Q9C0D0 580 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 MLXIPQ9HAP2 919 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 PXMP2Q9NR77 195 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 ZSWIM5Q9P217 1185 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 GTF2IRD1Q9UHL9 959 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 DDX41Q9UJV9 622 aaKnown RBP8.39□□□□□ -1.07
BRCA1-214ENST00000477152 PCDHA1Q9Y5I3 950 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 KLRF2D3W0D1 207 aa8.38□□□□□ -1.07
BRCA1-214ENST00000477152 NOP56O00567 594 aaKnown RBP8.38□□□□□ -1.07
BRCA1-214ENST00000477152 CAND2O75155 1236 aa8.38□□□□□ -1.07
BRCA1-214ENST00000477152 MYCLP12524 364 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-214ENST00000477152 TAGLNQ01995 201 aaKnown RBP8.38□□□□□ -1.07
BRCA1-214ENST00000477152 ARHGAP1Q07960 439 aa8.38□□□□□ -1.07
BRCA1-214ENST00000477152 NEDD9Q14511 834 aa8.38□□□□□ -1.07
BRCA1-214ENST00000477152 TMEM63BQ5T3F8 832 aa8.38□□□□□ -1.07
BRCA1-214ENST00000477152 ENAHQ8N8S7 591 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-214ENST00000477152 RAD9AQ99638 391 aa8.38□□□□□ -1.07
BRCA1-214ENST00000477152 ALG1Q9BT22 464 aa8.38□□□□□ -1.07
BRCA1-214ENST00000477152 NIFKQ9BYG3 293 aaKnown RBP8.38□□□□□ -1.07
BRCA1-214ENST00000477152 JMJD4Q9H9V9 463 aa8.38□□□□□ -1.07
BRCA1-214ENST00000477152 MTCH2Q9Y6C9 303 aa8.38□□□□□ -1.07
BRCA1-214ENST00000477152 DDX49Q9Y6V7 483 aaKnown RBP8.38□□□□□ -1.07
BRCA1-214ENST00000477152 COL6A3P12111 3177 aa8.38□□□□□ -1.07
BRCA1-214ENST00000477152 F2P00734 622 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 RPLP2P05387 115 aaKnown RBP8.37□□□□□ -1.07
BRCA1-214ENST00000477152 CKBP12277 381 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 EIF1AXP47813 144 aaKnown RBP8.37□□□□□ -1.07
BRCA1-214ENST00000477152 HSD17B4P51659 736 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 GHRHRQ02643 423 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 TAP1Q03518 808 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 POU4F2Q12837 409 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 PTPROQ16827 1216 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 KIAA0753Q2KHM9 967 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 GDF6Q6KF10 455 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-214ENST00000477152 CATIPQ7Z7H3 387 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 ETFBKMTQ8IXQ9 262 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 GIMAP8Q8ND71 665 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-214ENST00000477152 RHBDD1Q8TEB9 315 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 TNPO1Q92973 898 aaKnown RBP8.37□□□□□ -1.07
BRCA1-214ENST00000477152 SPATA33Q96N06 139 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 TGS1Q96RS0 853 aaKnown RBP8.37□□□□□ -1.07
BRCA1-214ENST00000477152 STIM2Q9P246 746 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 ZNF215Q9UL58 517 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-214ENST00000477152 INSL6Q9Y581 213 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 LAMA3Q16787 3333 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 C17orf102A2RUQ5 167 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 ARIH2O95376 493 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 CXCL10P02778 98 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 MYOGP15173 224 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 NPR3P17342 541 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 KIF5BP33176 963 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 GNAQP50148 359 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 RNF144AP50876 292 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-214ENST00000477152 WDR5P61964 334 aaKnown RBP8.37□□□□□ -1.07
BRCA1-214ENST00000477152 WTAPQ15007 396 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 CELF3Q5SZQ8 465 aaKnown RBP8.37□□□□□ -1.07
BRCA1-214ENST00000477152 XRRA1Q6P2D8 792 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 STOX1Q6ZVD7 989 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 NCOA7Q8NI08 942 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 LZTS2Q9BRK4 669 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 PDCD2LQ9BRP1 358 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 USP26Q9BXU7 913 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 HDAC6Q9UBN7 1215 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 FAM50BQ9Y247 325 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 KAT6AQ92794 2004 aa8.37□□□□□ -1.07
BRCA1-214ENST00000477152 PNMA6FA0A0J9YX94 578 aa8.36□□□□□ -1.07
BRCA1-214ENST00000477152 FIGNL2A6NMB9 653 aa8.36□□□□□ -1.07
BRCA1-214ENST00000477152 IFIT3O14879 490 aaKnown RBP8.36□□□□□ -1.07
BRCA1-214ENST00000477152 GGPS1O95749 300 aa8.36□□□□□ -1.07
BRCA1-214ENST00000477152 PTGS1P23219 599 aa8.36□□□□□ -1.07
BRCA1-214ENST00000477152 RSPH3Q86UC2 560 aa8.36□□□□□ -1.07
BRCA1-214ENST00000477152 NLRX1Q86UT6 975 aa8.36□□□□□ -1.07
BRCA1-214ENST00000477152 VSIG10LQ86VR7 867 aa8.36□□□□□ -1.07
BRCA1-214ENST00000477152 TMTC2Q8N394 836 aa8.36□□□□□ -1.07
BRCA1-214ENST00000477152 SEPT8Q92599 483 aa8.36□□□□□ -1.07
BRCA1-214ENST00000477152 APBB2Q92870 758 aa8.36□□□□□ -1.07
BRCA1-214ENST00000477152 CDHR1Q96JP9 859 aa8.36□□□□□ -1.07
BRCA1-214ENST00000477152 EHMT1Q9H9B1 1298 aa8.36□□□□□ -1.07
BRCA1-214ENST00000477152 SEC63Q9UGP8 760 aaKnown RBP8.36□□□□□ -1.07
BRCA1-214ENST00000477152 RSPH10B2B2RC85 870 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms