RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 GJC2Q5T442 439 aaPredicted RBP16■□□□□ 0.15
COL4A6-206ENST00000477085 KCNV1Q6PIU1 500 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 MYCT1Q8N699 235 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 CSGALNACT2Q8N6G5 542 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 GPR20Q99678 358 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 IKZF4Q9H2S9 585 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 PARVGQ9HBI0 331 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 GPRC5CQ9NQ84 441 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 OLFML3Q9NRN5 406 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 CDKN2AIPQ9NXV6 580 aaPredicted RBP16■□□□□ 0.15
COL4A6-206ENST00000477085 EIF2AK3Q9NZJ5 1116 aaKnown RBP16■□□□□ 0.15
COL4A6-206ENST00000477085 LIMA1Q9UHB6 759 aaKnown RBP16■□□□□ 0.15
COL4A6-206ENST00000477085 ODF2LQ9ULJ1 636 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 DIS3Q9Y2L1 958 aaKnown RBP16■□□□□ 0.15
COL4A6-206ENST00000477085 MCM3APO60318 1980 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 A0A1B0GTH6 734 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 RBM47A0AV96 593 aaKnown RBP16■□□□□ 0.15
COL4A6-206ENST00000477085 BICDL2A1A5D9 508 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 KCNJ18B7U540 433 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 TEX33O43247 280 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 PRPF6O94906 941 aaKnown RBP16■□□□□ 0.15
COL4A6-206ENST00000477085 FAM13AO94988 1023 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 GAP43P17677 238 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 SREBF2Q12772 1141 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 KCNJ12Q14500 433 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 DRC7Q8IY82 874 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 SEPT1Q8WYJ6 367 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 USP6NLQ92738 828 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 THAP9Q9H5L6 903 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 MRPL44Q9H9J2 332 aaKnown RBP16■□□□□ 0.15
COL4A6-206ENST00000477085 MLXIPQ9HAP2 919 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 ZNF302Q9NR11 478 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 PDLIM7Q9NR12 457 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 PLXNA1Q9UIW2 1896 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 AOC2O75106 756 aa15.99■□□□□ 0.15
COL4A6-206ENST00000477085 TCF7P36402 384 aaPredicted RBP15.99■□□□□ 0.15
COL4A6-206ENST00000477085 SOX10P56693 466 aa15.99■□□□□ 0.15
COL4A6-206ENST00000477085 ARID5BQ14865 1188 aa15.99■□□□□ 0.15
COL4A6-206ENST00000477085 ZC2HC1CQ53FD0 456 aaPredicted RBP15.99■□□□□ 0.15
COL4A6-206ENST00000477085 LRRC55Q6ZSA7 311 aa15.99■□□□□ 0.15
COL4A6-206ENST00000477085 ZNF720Q7Z2F6 126 aa15.99■□□□□ 0.15
COL4A6-206ENST00000477085 CCDC186Q7Z3E2 898 aa15.99■□□□□ 0.15
COL4A6-206ENST00000477085 KSR1Q8IVT5 923 aa15.99■□□□□ 0.15
COL4A6-206ENST00000477085 ZNF507Q8TCN5 953 aa15.99■□□□□ 0.15
COL4A6-206ENST00000477085 TRIM44Q96DX7 344 aaPredicted RBP15.99■□□□□ 0.15
COL4A6-206ENST00000477085 CEP170P1Q96L14 293 aa15.99■□□□□ 0.15
COL4A6-206ENST00000477085 CEP89Q96ST8 783 aa15.99■□□□□ 0.15
COL4A6-206ENST00000477085 STRA6Q9BX79 667 aa15.99■□□□□ 0.15
COL4A6-206ENST00000477085 ZFYVE28Q9HCC9 887 aa15.99■□□□□ 0.15
COL4A6-206ENST00000477085 FLRT1Q9NZU1 646 aa15.99■□□□□ 0.15
COL4A6-206ENST00000477085 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.98■□□□□ 0.15
COL4A6-206ENST00000477085 PTMAP06454 111 aaKnown RBP15.98■□□□□ 0.15
COL4A6-206ENST00000477085 BMT2Q1RMZ1 405 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 HS1BP3Q53T59 392 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 SCFD2Q8WU76 684 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 TINF2Q9BSI4 451 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 KCNF1Q9H3M0 494 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 VTA1Q9NP79 307 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 CYP26B1Q9NR63 512 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 GJD2Q9UKL4 321 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 WDR81Q562E7 1941 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 GCNT3O95395 438 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 ADCYAP1R1P41586 468 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 LRRC63Q05C16 580 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 ARHGAP1Q07960 439 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 MAP2K5Q13163 448 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 TTLL4Q14679 1199 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 XKR3Q5GH77 459 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 ODR4Q5SWX8 454 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 FOXR2Q6PJQ5 311 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 PAXIP1Q6ZW49 1069 aaPredicted RBP15.98■□□□□ 0.15
COL4A6-206ENST00000477085 OTUD6AQ7L8S5 288 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 DHX37Q8IY37 1157 aaKnown RBP15.98■□□□□ 0.15
COL4A6-206ENST00000477085 AFAP1L1Q8TED9 768 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 RTN4Q9NQC3 1192 aaKnown RBP15.98■□□□□ 0.15
COL4A6-206ENST00000477085 XPNPEP1Q9NQW7 623 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 TAB2Q9NYJ8 693 aa15.98■□□□□ 0.15
COL4A6-206ENST00000477085 SEPT9Q9UHD8 586 aaPredicted RBP15.98■□□□□ 0.15
COL4A6-206ENST00000477085 ZNF236Q9UL36 1845 aa15.97■□□□□ 0.15
COL4A6-206ENST00000477085 CBFA2T2O43439 604 aa15.97■□□□□ 0.15
COL4A6-206ENST00000477085 CA12O43570 354 aa15.97■□□□□ 0.15
COL4A6-206ENST00000477085 DKC1O60832 514 aaKnown RBP eCLIP15.97■□□□□ 0.15
COL4A6-206ENST00000477085 LGR5O75473 907 aa15.97■□□□□ 0.15
COL4A6-206ENST00000477085 OATP04181 439 aa15.97■□□□□ 0.15
COL4A6-206ENST00000477085 STAT5BP51692 787 aa15.97■□□□□ 0.15
COL4A6-206ENST00000477085 COPB1P53618 953 aaKnown RBP15.97■□□□□ 0.15
COL4A6-206ENST00000477085 KNOP1Q1ED39 458 aaKnown RBP15.97■□□□□ 0.15
COL4A6-206ENST00000477085 TMC6Q7Z403 805 aa15.97■□□□□ 0.15
COL4A6-206ENST00000477085 FILIP1Q7Z7B0 1213 aa15.97■□□□□ 0.15
COL4A6-206ENST00000477085 TRIM50Q86XT4 487 aa15.97■□□□□ 0.15
COL4A6-206ENST00000477085 CREBRFQ8IUR6 639 aa15.97■□□□□ 0.15
COL4A6-206ENST00000477085 VSTM4Q8IW00 320 aa15.97■□□□□ 0.15
COL4A6-206ENST00000477085 NOC3LQ8WTT2 800 aaKnown RBP15.97■□□□□ 0.15
COL4A6-206ENST00000477085 SPATA33Q96N06 139 aa15.97■□□□□ 0.15
COL4A6-206ENST00000477085 VPS16Q9H269 839 aa15.97■□□□□ 0.15
COL4A6-206ENST00000477085 SEL1LQ9UBV2 794 aa15.97■□□□□ 0.15
COL4A6-206ENST00000477085 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.97■□□□□ 0.15
COL4A6-206ENST00000477085 ZMYM2Q9UBW7 1377 aa15.97■□□□□ 0.15
COL4A6-206ENST00000477085 TGFB1I1O43294 461 aa15.96■□□□□ 0.15
COL4A6-206ENST00000477085 ADCY6O43306 1168 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms