RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 RC3H2Q9HBD1 1191 aaKnown RBP18.31■□□□□ 0.52
COL1A1-205ENST00000476387 LIMCH1Q9UPQ0 1083 aa18.31■□□□□ 0.52
COL1A1-205ENST00000476387 TTC3P53804 2025 aa18.31■□□□□ 0.52
COL1A1-205ENST00000476387 COL1A2P08123 1366 aa18.3■□□□□ 0.52
COL1A1-205ENST00000476387 IGSF9BQ9UPX0 1349 aa18.3■□□□□ 0.52
COL1A1-205ENST00000476387 M0R2N6 131 aa18.3■□□□□ 0.52
COL1A1-205ENST00000476387 DTNBO60941 627 aa18.3■□□□□ 0.52
COL1A1-205ENST00000476387 TIGD5Q53EQ6 642 aa18.3■□□□□ 0.52
COL1A1-205ENST00000476387 ZNF746Q6NUN9 644 aaPredicted RBP18.3■□□□□ 0.52
COL1A1-205ENST00000476387 CCDC60Q8IWA6 550 aaPredicted RBP18.3■□□□□ 0.52
COL1A1-205ENST00000476387 SMAP1Q8IYB5 467 aaPredicted RBP18.3■□□□□ 0.52
COL1A1-205ENST00000476387 FIBCD1Q8N539 461 aa18.3■□□□□ 0.52
COL1A1-205ENST00000476387 NSUN7Q8NE18 718 aaKnown RBP18.3■□□□□ 0.52
COL1A1-205ENST00000476387 TRAPPC12Q8WVT3 735 aa18.3■□□□□ 0.52
COL1A1-205ENST00000476387 LENG9Q96B70 501 aa18.3■□□□□ 0.52
COL1A1-205ENST00000476387 CELF4Q9BZC1 486 aaKnown RBP18.3■□□□□ 0.52
COL1A1-205ENST00000476387 AGO3Q9H9G7 860 aaKnown RBP18.3■□□□□ 0.52
COL1A1-205ENST00000476387 BRMS1Q9HCU9 246 aa18.3■□□□□ 0.52
COL1A1-205ENST00000476387 ZNF302Q9NR11 478 aa18.3■□□□□ 0.52
COL1A1-205ENST00000476387 RWDD3Q9Y3V2 267 aa18.3■□□□□ 0.52
COL1A1-205ENST00000476387 TCF20Q9UGU0 1960 aaKnown RBP18.3■□□□□ 0.52
COL1A1-205ENST00000476387 LOXHD1Q8IVV2 1947 aa18.29■□□□□ 0.52
COL1A1-205ENST00000476387 ADGRA3Q8IWK6 1321 aa18.29■□□□□ 0.52
COL1A1-205ENST00000476387 RALGAPA2Q2PPJ7 1873 aa18.29■□□□□ 0.52
COL1A1-205ENST00000476387 EVPLQ92817 2033 aa18.29■□□□□ 0.52
COL1A1-205ENST00000476387 C5orf67F2Z3F1 127 aa18.29■□□□□ 0.52
COL1A1-205ENST00000476387 KLRC1P26715 233 aa18.29■□□□□ 0.52
COL1A1-205ENST00000476387 CD52P31358 61 aa18.29■□□□□ 0.52
COL1A1-205ENST00000476387 GPM6BQ13491 265 aa18.29■□□□□ 0.52
COL1A1-205ENST00000476387 ZNF484Q5JVG2 852 aa18.29■□□□□ 0.52
COL1A1-205ENST00000476387 PDXDC2PQ6P474 469 aa18.29■□□□□ 0.52
COL1A1-205ENST00000476387 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.28■□□□□ 0.52
COL1A1-205ENST00000476387 MSH4O15457 936 aa18.28■□□□□ 0.52
COL1A1-205ENST00000476387 GAS7O60861 476 aa18.28■□□□□ 0.52
COL1A1-205ENST00000476387 RB1P06400 928 aa18.28■□□□□ 0.52
COL1A1-205ENST00000476387 KRT2P35908 639 aa18.28■□□□□ 0.52
COL1A1-205ENST00000476387 RBM25P49756 843 aaKnown RBP18.28■□□□□ 0.52
COL1A1-205ENST00000476387 PAK2Q13177 524 aa18.28■□□□□ 0.52
COL1A1-205ENST00000476387 TRIM29Q14134 588 aa18.28■□□□□ 0.52
COL1A1-205ENST00000476387 INF2Q27J81 1249 aa18.28■□□□□ 0.52
COL1A1-205ENST00000476387 LRCH2Q5VUJ6 765 aa18.28■□□□□ 0.52
COL1A1-205ENST00000476387 SWSAP1Q6NVH7 229 aa18.28■□□□□ 0.52
COL1A1-205ENST00000476387 MOXD1Q6UVY6 613 aa18.28■□□□□ 0.52
COL1A1-205ENST00000476387 CLP1Q92989 425 aaKnown RBP18.28■□□□□ 0.52
COL1A1-205ENST00000476387 ZNF689Q96CS4 500 aaPredicted RBP18.28■□□□□ 0.52
COL1A1-205ENST00000476387 NECAB3Q96P71 396 aaPredicted RBP18.28■□□□□ 0.52
COL1A1-205ENST00000476387 UBE2ZQ9H832 354 aaPredicted RBP18.28■□□□□ 0.52
COL1A1-205ENST00000476387 GJB4Q9NTQ9 266 aa18.28■□□□□ 0.52
COL1A1-205ENST00000476387 SAMM50Q9Y512 469 aa18.28■□□□□ 0.52
COL1A1-205ENST00000476387 MAFBQ9Y5Q3 323 aaPredicted RBP18.28■□□□□ 0.52
COL1A1-205ENST00000476387 NLRC5Q86WI3 1866 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 WDR64B1ANS9 1081 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 JAK2O60674 1132 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 DGKIO75912 1065 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 TDP2O95551 362 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 PSAPP07602 524 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 LINC00271P0C7V0 271 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 FDPSP14324 419 aaKnown RBP18.27■□□□□ 0.52
COL1A1-205ENST00000476387 CTNNB1P35222 781 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 BMPR1AP36894 532 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 TMEM62Q0P6H9 643 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 LETM2Q2VYF4 491 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 Q4G0T1 1027 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 NEK8Q86SG6 692 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 NPAS4Q8IUM7 802 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 CCDC83Q8IWF9 413 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 CKAP2LQ8IYA6 745 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 CRIPAKQ8N1N5 446 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 LINC01599Q8WXQ3 324 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 BBXQ8WY36 941 aaPredicted RBP18.27■□□□□ 0.52
COL1A1-205ENST00000476387 ZSCAN31Q96LW9 406 aaPredicted RBP18.27■□□□□ 0.52
COL1A1-205ENST00000476387 RIT2Q99578 217 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 C11orf84Q9BUA3 381 aaPredicted RBP18.27■□□□□ 0.52
COL1A1-205ENST00000476387 TEKT3Q9BXF9 490 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 SH2B1Q9NRF2 756 aaPredicted RBP18.27■□□□□ 0.52
COL1A1-205ENST00000476387 PADI3Q9ULW8 664 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 PCDHA10Q9Y5I2 948 aa18.27■□□□□ 0.52
COL1A1-205ENST00000476387 CYP3A7-CYP3A51PA0A087WV96 503 aa18.26■□□□□ 0.51
COL1A1-205ENST00000476387 ZBTB42B2RXF5 422 aa18.26■□□□□ 0.51
COL1A1-205ENST00000476387 EDIL3O43854 480 aa18.26■□□□□ 0.51
COL1A1-205ENST00000476387 ATP4AP20648 1035 aa18.26■□□□□ 0.51
COL1A1-205ENST00000476387 CYP3A7P24462 503 aa18.26■□□□□ 0.51
COL1A1-205ENST00000476387 FOSBP53539 338 aa18.26■□□□□ 0.51
COL1A1-205ENST00000476387 RABEP1Q15276 862 aa18.26■□□□□ 0.51
COL1A1-205ENST00000476387 LEXMQ3ZCV2 418 aa18.26■□□□□ 0.51
COL1A1-205ENST00000476387 PIK3AP1Q6ZUJ8 805 aa18.26■□□□□ 0.51
COL1A1-205ENST00000476387 RTN4RL1Q86UN2 441 aaPredicted RBP18.26■□□□□ 0.51
COL1A1-205ENST00000476387 KIAA0319LQ8IZA0 1049 aa18.26■□□□□ 0.51
COL1A1-205ENST00000476387 BANK1Q8NDB2 785 aa18.26■□□□□ 0.51
COL1A1-205ENST00000476387 OXER1Q8TDS5 423 aa18.26■□□□□ 0.51
COL1A1-205ENST00000476387 SLC5A5Q92911 643 aa18.26■□□□□ 0.51
COL1A1-205ENST00000476387 KIF2CQ99661 725 aa18.26■□□□□ 0.51
COL1A1-205ENST00000476387 NAP1L4Q99733 375 aaKnown RBP18.26■□□□□ 0.51
COL1A1-205ENST00000476387 DDX25Q9UHL0 483 aaKnown RBP18.26■□□□□ 0.51
COL1A1-205ENST00000476387 CHMP2AO43633 222 aa18.25■□□□□ 0.51
COL1A1-205ENST00000476387 ST18O60284 1047 aa18.25■□□□□ 0.51
COL1A1-205ENST00000476387 C22orf31O95567 290 aa18.25■□□□□ 0.51
COL1A1-205ENST00000476387 STAG3L1P0CL83 205 aa18.25■□□□□ 0.51
COL1A1-205ENST00000476387 GCFC2P16383 781 aaKnown RBP18.25■□□□□ 0.51
COL1A1-205ENST00000476387 SFNP31947 248 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms