RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 RPA1P27694 616 aa16.12■□□□□ 0.17
CCNL1-217ENST00000476367 MAGEA10P43363 369 aaPredicted RBP16.12■□□□□ 0.17
CCNL1-217ENST00000476367 QARSP47897 775 aaKnown RBP16.12■□□□□ 0.17
CCNL1-217ENST00000476367 CCL23P55773 120 aa16.12■□□□□ 0.17
CCNL1-217ENST00000476367 PSMC5P62195 406 aa16.12■□□□□ 0.17
CCNL1-217ENST00000476367 CTTNQ14247 550 aaKnown RBP16.12■□□□□ 0.17
CCNL1-217ENST00000476367 KCNK18Q7Z418 384 aa16.12■□□□□ 0.17
CCNL1-217ENST00000476367 SERINC5Q86VE9 423 aa16.12■□□□□ 0.17
CCNL1-217ENST00000476367 PNMA5Q96PV4 448 aa16.12■□□□□ 0.17
CCNL1-217ENST00000476367 CEP89Q96ST8 783 aa16.12■□□□□ 0.17
CCNL1-217ENST00000476367 SIP14410 1827 aa16.12■□□□□ 0.17
CCNL1-217ENST00000476367 TIMP1P01033 207 aa16.11■□□□□ 0.17
CCNL1-217ENST00000476367 P4HBP07237 508 aaKnown RBP16.11■□□□□ 0.17
CCNL1-217ENST00000476367 LONP1P36776 959 aaKnown RBP16.11■□□□□ 0.17
CCNL1-217ENST00000476367 ADAM17P78536 824 aa16.11■□□□□ 0.17
CCNL1-217ENST00000476367 PTK7Q13308 1070 aa16.11■□□□□ 0.17
CCNL1-217ENST00000476367 BFSP2Q13515 415 aa16.11■□□□□ 0.17
CCNL1-217ENST00000476367 HYIQ5T013 277 aa16.11■□□□□ 0.17
CCNL1-217ENST00000476367 PRPF38BQ5VTL8 546 aaKnown RBP16.11■□□□□ 0.17
CCNL1-217ENST00000476367 TPH2Q8IWU9 490 aa16.11■□□□□ 0.17
CCNL1-217ENST00000476367 CCDC155Q8N6L0 562 aa16.11■□□□□ 0.17
CCNL1-217ENST00000476367 SYMPKQ92797 1274 aaKnown RBP16.11■□□□□ 0.17
CCNL1-217ENST00000476367 SH2D3AQ9BRG2 576 aa16.11■□□□□ 0.17
CCNL1-217ENST00000476367 POLR3CQ9BUI4 534 aaPredicted RBP16.11■□□□□ 0.17
CCNL1-217ENST00000476367 SCAND2PQ9GZW5 306 aaPredicted RBP16.11■□□□□ 0.17
CCNL1-217ENST00000476367 WNT8AQ9H1J5 351 aa16.11■□□□□ 0.17
CCNL1-217ENST00000476367 LAMA2P24043 3122 aaKnown RBP16.11■□□□□ 0.17
CCNL1-217ENST00000476367 LOXHD1Q8IVV2 1947 aa16.1■□□□□ 0.17
CCNL1-217ENST00000476367 COL1A2P08123 1366 aa16.1■□□□□ 0.17
CCNL1-217ENST00000476367 RRN3P2A6NIE6 340 aa16.1■□□□□ 0.17
CCNL1-217ENST00000476367 RBAK-RBAKDNI3L0D1 243 aa16.1■□□□□ 0.17
CCNL1-217ENST00000476367 GRB10Q13322 594 aa16.1■□□□□ 0.17
CCNL1-217ENST00000476367 MTERF2Q49AM1 385 aa16.1■□□□□ 0.17
CCNL1-217ENST00000476367 MARCH8Q5T0T0 291 aa16.1■□□□□ 0.17
CCNL1-217ENST00000476367 PLA2G4FQ68DD2 849 aa16.1■□□□□ 0.17
CCNL1-217ENST00000476367 POTEGQ6S5H5 508 aa16.1■□□□□ 0.17
CCNL1-217ENST00000476367 RUFY4Q6ZNE9 571 aa16.1■□□□□ 0.17
CCNL1-217ENST00000476367 ANO5Q75V66 913 aa16.1■□□□□ 0.17
CCNL1-217ENST00000476367 ZNF579Q8NAF0 562 aaKnown RBP16.1■□□□□ 0.17
CCNL1-217ENST00000476367 CAGE1Q8TC20 777 aa16.1■□□□□ 0.17
CCNL1-217ENST00000476367 SCLYQ96I15 445 aa16.1■□□□□ 0.17
CCNL1-217ENST00000476367 AK8Q96MA6 479 aa16.1■□□□□ 0.17
CCNL1-217ENST00000476367 DDX11L8A8MPP1 907 aa16.09■□□□□ 0.17
CCNL1-217ENST00000476367 CUTAO60888 179 aa16.09■□□□□ 0.17
CCNL1-217ENST00000476367 LYPLA2O95372 231 aa16.09■□□□□ 0.17
CCNL1-217ENST00000476367 CTSHP09668 335 aa16.09■□□□□ 0.17
CCNL1-217ENST00000476367 THPOP40225 353 aa16.09■□□□□ 0.17
CCNL1-217ENST00000476367 ME1P48163 572 aa16.09■□□□□ 0.17
CCNL1-217ENST00000476367 XKR3Q5GH77 459 aa16.09■□□□□ 0.17
CCNL1-217ENST00000476367 ZNF484Q5JVG2 852 aa16.09■□□□□ 0.17
CCNL1-217ENST00000476367 CHRDL2Q6WN34 429 aa16.09■□□□□ 0.17
CCNL1-217ENST00000476367 C4orf19Q8IY42 314 aa16.09■□□□□ 0.17
CCNL1-217ENST00000476367 TMEM87AQ8NBN3 555 aa16.09■□□□□ 0.17
CCNL1-217ENST00000476367 NEK9Q8TD19 979 aa16.09■□□□□ 0.17
CCNL1-217ENST00000476367 RAB34Q9BZG1 259 aa16.09■□□□□ 0.17
CCNL1-217ENST00000476367 CCSER1Q9C0I3 900 aa16.09■□□□□ 0.17
CCNL1-217ENST00000476367 FAM49AQ9H0Q0 323 aaPredicted RBP16.09■□□□□ 0.17
CCNL1-217ENST00000476367 NRBP2Q9NSY0 501 aa16.09■□□□□ 0.17
CCNL1-217ENST00000476367 MBLAC1A4D2B0 266 aaPredicted RBP16.08■□□□□ 0.17
CCNL1-217ENST00000476367 PITPNM1O00562 1244 aa16.08■□□□□ 0.17
CCNL1-217ENST00000476367 DKC1O60832 514 aaKnown RBP eCLIP16.08■□□□□ 0.17
CCNL1-217ENST00000476367 GADD45BO75293 160 aaPredicted RBP16.08■□□□□ 0.17
CCNL1-217ENST00000476367 CKBP12277 381 aa16.08■□□□□ 0.17
CCNL1-217ENST00000476367 FPGSQ05932 587 aa16.08■□□□□ 0.17
CCNL1-217ENST00000476367 TARBP2Q15633 366 aaKnown RBP16.08■□□□□ 0.17
CCNL1-217ENST00000476367 TRIM71Q2Q1W2 868 aaKnown RBP16.08■□□□□ 0.17
CCNL1-217ENST00000476367 TMEM119Q4V9L6 283 aa16.08■□□□□ 0.17
CCNL1-217ENST00000476367 NAALADL2Q58DX5 795 aa16.08■□□□□ 0.17
CCNL1-217ENST00000476367 RESP18Q5W5W9 173 aa16.08■□□□□ 0.17
CCNL1-217ENST00000476367 ADALQ6DHV7 355 aa16.08■□□□□ 0.17
CCNL1-217ENST00000476367 MFSD5Q6N075 450 aa16.08■□□□□ 0.17
CCNL1-217ENST00000476367 MTHFD1LQ6UB35 978 aa16.08■□□□□ 0.17
CCNL1-217ENST00000476367 RETREG2Q8NC44 543 aa16.08■□□□□ 0.17
CCNL1-217ENST00000476367 ERMNQ8TAM6 284 aa16.08■□□□□ 0.17
CCNL1-217ENST00000476367 SNX29Q8TEQ0 813 aa16.08■□□□□ 0.17
CCNL1-217ENST00000476367 ZSWIM4Q9H7M6 989 aa16.08■□□□□ 0.17
CCNL1-217ENST00000476367 TUFT1Q9NNX1 390 aa16.08■□□□□ 0.17
CCNL1-217ENST00000476367 C22orf31O95567 290 aa16.08■□□□□ 0.16
CCNL1-217ENST00000476367 CSF2RAP15509 400 aa16.08■□□□□ 0.16
CCNL1-217ENST00000476367 KLRC1P26715 233 aa16.08■□□□□ 0.16
CCNL1-217ENST00000476367 KARSQ15046 597 aaKnown RBP16.08■□□□□ 0.16
CCNL1-217ENST00000476367 ZNF618Q5T7W0 954 aa16.08■□□□□ 0.16
CCNL1-217ENST00000476367 HAUS3Q68CZ6 603 aa16.08■□□□□ 0.16
CCNL1-217ENST00000476367 TAF2Q6P1X5 1199 aa16.08■□□□□ 0.16
CCNL1-217ENST00000476367 LRRC8DQ7L1W4 858 aa16.08■□□□□ 0.16
CCNL1-217ENST00000476367 TMEM199Q8N511 208 aa16.08■□□□□ 0.16
CCNL1-217ENST00000476367 TET1Q8NFU7 2136 aa16.08■□□□□ 0.16
CCNL1-217ENST00000476367 PIGOQ8TEQ8 1089 aa16.08■□□□□ 0.16
CCNL1-217ENST00000476367 DNAJB3Q8WWF6 145 aa16.08■□□□□ 0.16
CCNL1-217ENST00000476367 GOLPH3LQ9H4A5 285 aa16.08■□□□□ 0.16
CCNL1-217ENST00000476367 BLOC1S4Q9NUP1 217 aa16.08■□□□□ 0.16
CCNL1-217ENST00000476367 FAM237AA0A1B0GTK4 181 aa16.07■□□□□ 0.16
CCNL1-217ENST00000476367 SELPP16109 830 aa16.07■□□□□ 0.16
CCNL1-217ENST00000476367 YWHABP31946 246 aaKnown RBP16.07■□□□□ 0.16
CCNL1-217ENST00000476367 CCT6AP40227 531 aaKnown RBP16.07■□□□□ 0.16
CCNL1-217ENST00000476367 NPEPPSP55786 919 aa16.07■□□□□ 0.16
CCNL1-217ENST00000476367 RBL2Q08999 1139 aa16.07■□□□□ 0.16
CCNL1-217ENST00000476367 TBC1D8BQ0IIM8 1120 aa16.07■□□□□ 0.16
CCNL1-217ENST00000476367 CABP7Q86V35 215 aa16.07■□□□□ 0.16
CCNL1-217ENST00000476367 METTL13Q8N6R0 699 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms