RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 TAAR1Q96RJ0 339 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.85□□□□□ -1.15
SHQ1-207ENST00000475558 TEKT3Q9BXF9 490 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 FTOQ9C0B1 505 aaKnown RBP eCLIP7.85□□□□□ -1.15
SHQ1-207ENST00000475558 TMEM60Q9H2L4 133 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 TSPY26PQ9H489 355 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 A1CFQ9NQ94 594 aaKnown RBP7.85□□□□□ -1.15
SHQ1-207ENST00000475558 HOMER2Q9NSB8 354 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 TMEM63CQ9P1W3 806 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 THEGQ9P2T0 379 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 RIPK3Q9Y572 518 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 A0A0G2JMZ2 1700 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 NFASCO94856 1347 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 PLXNA1Q9UIW2 1896 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 IGLV3-22A0A075B6J6 115 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 PVALEFA0A1B0GWK0 134 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 SMTNL1A8MU46 457 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 SPATA31C2B4DYI2 1134 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 BHMG1C9JSJ3 638 aaPredicted RBP7.84□□□□□ -1.15
SHQ1-207ENST00000475558 FAM86B1E9PN63 330 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 MSH4O15457 936 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 EDIL3O43854 480 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 GAS7O60861 476 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 DUSP11O75319 330 aaKnown RBP7.84□□□□□ -1.15
SHQ1-207ENST00000475558 PSMD10O75832 226 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 KIF20AO95235 890 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 TDP2O95551 362 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 PGK2P07205 417 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 P4HBP07237 508 aaKnown RBP7.84□□□□□ -1.15
SHQ1-207ENST00000475558 FAM86B2P0C5J1 330 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 TAL1P17542 331 aaPredicted RBP7.84□□□□□ -1.15
SHQ1-207ENST00000475558 STAT6P42226 847 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 MRE11P49959 708 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 CDK7P50613 346 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 JAK3P52333 1124 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 TPM4P67936 248 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 PDE4DQ08499 809 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 PSMD2Q13200 908 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 RAB30Q15771 203 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 KCNA10Q16322 511 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 LONRF3Q496Y0 759 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 TMEM240Q5SV17 173 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 NT5DC1Q5TFE4 455 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 RASIP1Q5U651 963 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 LRCH2Q5VUJ6 765 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 ZNF746Q6NUN9 644 aaPredicted RBP7.84□□□□□ -1.15
SHQ1-207ENST00000475558 CNNM4Q6P4Q7 775 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 PSRC1Q6PGN9 363 aaPredicted RBP7.84□□□□□ -1.15
SHQ1-207ENST00000475558 OTUD6AQ7L8S5 288 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 SMAP1Q8IYB5 467 aaPredicted RBP7.84□□□□□ -1.15
SHQ1-207ENST00000475558 FAM133AQ8N9E0 248 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 PCSK9Q8NBP7 692 aaKnown RBP7.84□□□□□ -1.15
SHQ1-207ENST00000475558 KLHDC9Q8NEP7 349 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 ETNPPLQ8TBG4 499 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 MORC4Q8TE76 937 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 SMARCE1Q969G3 411 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 EPSTI1Q96J88 318 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 CHAMP1Q96JM3 812 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 INPP4AQ96PE3 977 aaPredicted RBP7.84□□□□□ -1.15
SHQ1-207ENST00000475558 ZBED2Q9BTP6 218 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 PBX4Q9BYU1 374 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 GZF1Q9H116 711 aaPredicted RBP7.84□□□□□ -1.15
SHQ1-207ENST00000475558 MTIF3Q9H2K0 278 aaKnown RBP7.84□□□□□ -1.15
SHQ1-207ENST00000475558 PRDM12Q9H4Q4 367 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 SPC25Q9HBM1 224 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 DISC1Q9NRI5 854 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 KCNH7Q9NS40 1196 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 KCND2Q9NZV8 630 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 MSRAQ9UJ68 235 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 TBX21Q9UL17 535 aa7.84□□□□□ -1.15
SHQ1-207ENST00000475558 SYNGAP1Q96PV0 1343 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 SYNRGQ9UMZ2 1314 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 MUC3AQ02505 3323 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 DNAJC25-GNG10A0A024R161 153 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 SYCE3A1L190 88 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 TLR3O15455 904 aaKnown RBP7.83□□□□□ -1.16
SHQ1-207ENST00000475558 GTPBP6O43824 516 aaPredicted RBP7.83□□□□□ -1.16
SHQ1-207ENST00000475558 SLC37A4O43826 429 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 LYPLA2O95372 231 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 MYCLP12524 364 aaPredicted RBP7.83□□□□□ -1.16
SHQ1-207ENST00000475558 SCP2P22307 547 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 EDNRBP24530 442 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 CST5P28325 142 aaPredicted RBP7.83□□□□□ -1.16
SHQ1-207ENST00000475558 ABCD1P33897 745 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 CCT6AP40227 531 aaKnown RBP7.83□□□□□ -1.16
SHQ1-207ENST00000475558 POSTNQ15063 836 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 IL17AQ16552 155 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 CAMK4Q16566 473 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 CCSAPQ6IQ19 270 aaPredicted RBP7.83□□□□□ -1.16
SHQ1-207ENST00000475558 MAMDC4Q6UXC1 1216 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 ZNF365Q70YC5 407 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 C16orf59Q7L2K0 433 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 ADAMTS19Q8TE59 1207 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 ZDHHC16Q969W1 377 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 VTI1AQ96AJ9 217 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 LENG9Q96B70 501 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 DHX58Q96C10 678 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 FAM122AQ96E09 287 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 PAGE5Q96GU1 130 aa7.83□□□□□ -1.16
SHQ1-207ENST00000475558 UHRF1Q96T88 793 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms