RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 MAFAQ8NHW3 353 aaPredicted RBP12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 DNAJB3Q8WWF6 145 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 KCNJ14Q9UNX9 436 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 SAMM50Q9Y512 469 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 NUB1Q9Y5A7 615 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 PCDHA2Q9Y5H9 948 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 COL1A2P08123 1366 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 CCDC194A0A1B0GVG4 234 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 SMIM35A0A1B0GVV1 85 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 M0QZ92 97 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 GAS7O60861 476 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 GJB5O95377 273 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 CTDNEP1O95476 244 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 MYOGP15173 224 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 SFNP31947 248 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 DEFB103AP81534 67 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 MGAT3Q09327 533 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 ZNF484Q5JVG2 852 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 LRCH2Q5VUJ6 765 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 CKAP2LQ8IYA6 745 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 NME8Q8N427 588 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 SLC5A5Q92911 643 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 RAD9AQ99638 391 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 NAP1L4Q99733 375 aaKnown RBP12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 TEKT3Q9BXF9 490 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 IFIH1Q9BYX4 1025 aaKnown RBP12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 PRDM12Q9H4Q4 367 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 BRMS1Q9HCU9 246 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 CEP131Q9UPN4 1083 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 MAFBQ9Y5Q3 323 aaPredicted RBP12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 MYH7BA7E2Y1 1941 aa12.97□□□□□ -0.33
HLA-DOB-208ENST00000475235 EDIL3O43854 480 aa12.97□□□□□ -0.33
HLA-DOB-208ENST00000475235 CHRNA1P02708 482 aa12.97□□□□□ -0.33
HLA-DOB-208ENST00000475235 JAK3P52333 1124 aa12.97□□□□□ -0.33
HLA-DOB-208ENST00000475235 MTA1Q13330 715 aa12.97□□□□□ -0.33
HLA-DOB-208ENST00000475235 TCTN1Q2MV58 587 aa12.97□□□□□ -0.33
HLA-DOB-208ENST00000475235 MTHFD1LQ6UB35 978 aa12.97□□□□□ -0.33
HLA-DOB-208ENST00000475235 NECAB1Q8N987 351 aa12.97□□□□□ -0.33
HLA-DOB-208ENST00000475235 USP38Q8NB14 1042 aa12.97□□□□□ -0.33
HLA-DOB-208ENST00000475235 RDM1Q8NG50 284 aa12.97□□□□□ -0.33
HLA-DOB-208ENST00000475235 FAM167AQ96KS9 214 aa12.97□□□□□ -0.33
HLA-DOB-208ENST00000475235 MBOAT7Q96N66 472 aa12.97□□□□□ -0.33
HLA-DOB-208ENST00000475235 UIMC1Q96RL1 719 aa12.97□□□□□ -0.33
HLA-DOB-208ENST00000475235 FAM49AQ9H0Q0 323 aaPredicted RBP12.97□□□□□ -0.33
HLA-DOB-208ENST00000475235 SQORQ9Y6N5 450 aa12.97□□□□□ -0.33
HLA-DOB-208ENST00000475235 TDP2O95551 362 aa12.96□□□□□ -0.33
HLA-DOB-208ENST00000475235 GHRP10912 638 aa12.96□□□□□ -0.33
HLA-DOB-208ENST00000475235 GCFC2P16383 781 aaKnown RBP12.96□□□□□ -0.33
HLA-DOB-208ENST00000475235 MRPS6P82932 125 aaKnown RBP12.96□□□□□ -0.33
HLA-DOB-208ENST00000475235 INF2Q27J81 1249 aa12.96□□□□□ -0.33
HLA-DOB-208ENST00000475235 C8orf34Q49A92 452 aa12.96□□□□□ -0.33
HLA-DOB-208ENST00000475235 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.96□□□□□ -0.33
HLA-DOB-208ENST00000475235 NEK8Q86SG6 692 aa12.96□□□□□ -0.33
HLA-DOB-208ENST00000475235 MYOCDQ8IZQ8 938 aa12.96□□□□□ -0.33
HLA-DOB-208ENST00000475235 NSUN7Q8NE18 718 aaKnown RBP12.96□□□□□ -0.33
HLA-DOB-208ENST00000475235 DISC1Q9NRI5 854 aa12.96□□□□□ -0.33
HLA-DOB-208ENST00000475235 GABBR1Q9UBS5 961 aa12.96□□□□□ -0.33
HLA-DOB-208ENST00000475235 DDX25Q9UHL0 483 aaKnown RBP12.96□□□□□ -0.33
HLA-DOB-208ENST00000475235 INSL6Q9Y581 213 aa12.96□□□□□ -0.33
HLA-DOB-208ENST00000475235 CDY2AQ9Y6F7 541 aa12.96□□□□□ -0.33
HLA-DOB-208ENST00000475235 IGSF9BQ9UPX0 1349 aa12.95□□□□□ -0.34
HLA-DOB-208ENST00000475235 ZNF500O60304 480 aaPredicted RBP12.95□□□□□ -0.34
HLA-DOB-208ENST00000475235 PSMD10O75832 226 aa12.95□□□□□ -0.34
HLA-DOB-208ENST00000475235 LARGE1O95461 756 aa12.95□□□□□ -0.34
HLA-DOB-208ENST00000475235 FDPSP14324 419 aaKnown RBP12.95□□□□□ -0.34
HLA-DOB-208ENST00000475235 KLRC1P26715 233 aa12.95□□□□□ -0.34
HLA-DOB-208ENST00000475235 KRT2P35908 639 aa12.95□□□□□ -0.34
HLA-DOB-208ENST00000475235 TAP1Q03518 808 aa12.95□□□□□ -0.34
HLA-DOB-208ENST00000475235 TRIM29Q14134 588 aa12.95□□□□□ -0.34
HLA-DOB-208ENST00000475235 LPIN1Q14693 890 aa12.95□□□□□ -0.34
HLA-DOB-208ENST00000475235 LETM2Q2VYF4 491 aa12.95□□□□□ -0.34
HLA-DOB-208ENST00000475235 FBXO47Q5MNV8 452 aa12.95□□□□□ -0.34
HLA-DOB-208ENST00000475235 PPP4R3AQ6IN85 833 aa12.95□□□□□ -0.34
HLA-DOB-208ENST00000475235 TRAPPC12Q8WVT3 735 aa12.95□□□□□ -0.34
HLA-DOB-208ENST00000475235 SPOCK2Q92563 424 aa12.95□□□□□ -0.34
HLA-DOB-208ENST00000475235 NRBP2Q9NSY0 501 aa12.95□□□□□ -0.34
HLA-DOB-208ENST00000475235 LIMCH1Q9UPQ0 1083 aa12.95□□□□□ -0.34
HLA-DOB-208ENST00000475235 TRPV2Q9Y5S1 764 aa12.95□□□□□ -0.34
HLA-DOB-208ENST00000475235 KDM3AQ9Y4C1 1321 aa12.94□□□□□ -0.34
HLA-DOB-208ENST00000475235 COL6A3P12111 3177 aa12.94□□□□□ -0.34
HLA-DOB-208ENST00000475235 CHMP2AO43633 222 aa12.94□□□□□ -0.34
HLA-DOB-208ENST00000475235 ATP4AP20648 1035 aa12.94□□□□□ -0.34
HLA-DOB-208ENST00000475235 PIK3AP1Q6ZUJ8 805 aa12.94□□□□□ -0.34
HLA-DOB-208ENST00000475235 TMCO2Q7Z6W1 182 aaPredicted RBP12.94□□□□□ -0.34
HLA-DOB-208ENST00000475235 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.94□□□□□ -0.34
HLA-DOB-208ENST00000475235 BANK1Q8NDB2 785 aa12.94□□□□□ -0.34
HLA-DOB-208ENST00000475235 ETNPPLQ8TBG4 499 aa12.94□□□□□ -0.34
HLA-DOB-208ENST00000475235 TOP1MTQ969P6 601 aa12.94□□□□□ -0.34
HLA-DOB-208ENST00000475235 ZBTB10Q96DT7 871 aa12.94□□□□□ -0.34
HLA-DOB-208ENST00000475235 FTHL17Q9BXU8 183 aa12.94□□□□□ -0.34
HLA-DOB-208ENST00000475235 CELF4Q9BZC1 486 aaKnown RBP12.94□□□□□ -0.34
HLA-DOB-208ENST00000475235 UNC45AQ9H3U1 944 aa12.94□□□□□ -0.34
HLA-DOB-208ENST00000475235 CDH23Q9H251 3354 aa12.94□□□□□ -0.34
HLA-DOB-208ENST00000475235 SCN5AQ14524 2016 aa12.94□□□□□ -0.34
HLA-DOB-208ENST00000475235 TBX3O15119 743 aa12.93□□□□□ -0.34
HLA-DOB-208ENST00000475235 MAGEB2O15479 319 aa12.93□□□□□ -0.34
HLA-DOB-208ENST00000475235 OATP04181 439 aa12.93□□□□□ -0.34
HLA-DOB-208ENST00000475235 IGFBP4P22692 258 aa12.93□□□□□ -0.34
HLA-DOB-208ENST00000475235 HTRA4P83105 476 aaPredicted RBP12.93□□□□□ -0.34
HLA-DOB-208ENST00000475235 MIER3Q7Z3K6 550 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms