RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 PCDHA10Q9Y5I2 948 aa7.37□□□□□ -1.23
ATG4A-207ENST00000474825 MAFBQ9Y5Q3 323 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-207ENST00000474825 LRRC37A2A6NM11 1700 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 IGSF9BQ9UPX0 1349 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 LRRC10BA6NIK2 292 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 ZNF862O60290 1169 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 LGR5O75473 907 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 ALDH1A1P00352 501 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 UBA1P22314 1058 aaKnown RBP7.36□□□□□ -1.23
ATG4A-207ENST00000474825 PRCPP42785 496 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 RARRES1P49788 294 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 ACTR2P61160 394 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 ASIC1P78348 528 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 CYP4A11Q02928 519 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 STK4Q13043 487 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 CTTNQ14247 550 aaKnown RBP7.36□□□□□ -1.23
ATG4A-207ENST00000474825 TAF1CQ15572 869 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-207ENST00000474825 CELF3Q5SZQ8 465 aaKnown RBP7.36□□□□□ -1.23
ATG4A-207ENST00000474825 SPATA1Q5VX52 437 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 ISM2Q6H9L7 571 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 CENPPQ6IPU0 288 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 RINT1Q6NUQ1 792 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 TAPT1Q6NXT6 567 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 ARMCX2Q7L311 632 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 TPH2Q8IWU9 490 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 GUF1Q8N442 669 aaKnown RBP7.36□□□□□ -1.23
ATG4A-207ENST00000474825 AOPEPQ8N6M6 819 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 AFAP1L1Q8TED9 768 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 CCDC47Q96A33 483 aaKnown RBP7.36□□□□□ -1.23
ATG4A-207ENST00000474825 EMID1Q96A84 441 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-207ENST00000474825 DHTKD1Q96HY7 919 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-207ENST00000474825 LRCH3Q96II8 777 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 MAML3Q96JK9 1138 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 FIZ1Q96SL8 496 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 ZIC5Q96T25 663 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 TIPINQ9BVW5 301 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 BCAS3Q9H6U6 928 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 ZFYVE28Q9HCC9 887 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 JPH1Q9HDC5 661 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-207ENST00000474825 VTA1Q9NP79 307 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 PDLIM7Q9NR12 457 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 OLFML3Q9NRN5 406 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 SEPT9Q9UHD8 586 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-207ENST00000474825 CPA4Q9UI42 421 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 ODF2LQ9ULJ1 636 aa7.36□□□□□ -1.23
ATG4A-207ENST00000474825 GSTTP1A0A1W2PQM5 241 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 BECN2A8MW95 431 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 GOLGA6L19H0YKK7 550 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 ZBTB39O15060 712 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 CHMP2AO43633 222 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 ARIH2O95376 493 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 SNAI1O95863 264 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-207ENST00000474825 PSAPP07602 524 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 SUPT20HL2P0C7V6 817 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 MAPTP10636 758 aaKnown RBP7.35□□□□□ -1.23
ATG4A-207ENST00000474825 HOXD8P13378 290 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-207ENST00000474825 GAP43P17677 238 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 YWHABP31946 246 aaKnown RBP7.35□□□□□ -1.23
ATG4A-207ENST00000474825 CCDC173Q0VFZ6 552 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 COASYQ13057 564 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 MAP2K5Q13163 448 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 MAPK7Q13164 816 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 CRHR2Q13324 411 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 UGCGQ16739 394 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 BMT2Q1RMZ1 405 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 CDKAL1Q5VV42 579 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 OLFML2BQ68BL8 750 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 TTI2Q6NXR4 508 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 MIS18BP1Q6P0N0 1132 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 EPM2AIP1Q7L775 607 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-207ENST00000474825 APTXQ7Z2E3 356 aaKnown RBP7.35□□□□□ -1.23
ATG4A-207ENST00000474825 GPBP1Q86WP2 473 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 CCDC65Q8IXS2 484 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 ZC3H3Q8IXZ2 948 aaKnown RBP7.35□□□□□ -1.23
ATG4A-207ENST00000474825 DAW1Q8N136 415 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 PIGOQ8TEQ8 1089 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 SCFD2Q8WU76 684 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 TMEM174Q8WUU8 243 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 SEPT1Q8WYJ6 367 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 ATP6V0A1Q93050 837 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 ZNF775Q96BV0 537 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-207ENST00000474825 CEP89Q96ST8 783 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 PCYT2Q99447 389 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 TINF2Q9BSI4 451 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 RUSC1Q9BVN2 902 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 STRA6Q9BX79 667 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 NIFKQ9BYG3 293 aaKnown RBP7.35□□□□□ -1.23
ATG4A-207ENST00000474825 BHMT2Q9H2M3 363 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 EXOC1Q9NV70 894 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 PANK4Q9NVE7 773 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 SEL1LQ9UBV2 794 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 GDAQ9Y2T3 454 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 TELO2Q9Y4R8 837 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 PPME1Q9Y570 386 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 IVNS1ABPQ9Y6Y0 642 aa7.35□□□□□ -1.23
ATG4A-207ENST00000474825 CASP8AP2Q9UKL3 1982 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 DDX39AO00148 427 aaKnown RBP7.34□□□□□ -1.23
ATG4A-207ENST00000474825 PSMA7O14818 248 aa7.34□□□□□ -1.23
ATG4A-207ENST00000474825 XRCC5P13010 732 aaKnown RBP7.34□□□□□ -1.23
ATG4A-207ENST00000474825 ATP4AP20648 1035 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms