RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 SLC10A3P09131 477 aa23.21■■□□□ 1.31
SH3D21-202ENST00000474766 KCNK18Q7Z418 384 aa23.21■■□□□ 1.31
SH3D21-202ENST00000474766 ANKRD13AQ8IZ07 590 aa23.21■■□□□ 1.31
SH3D21-202ENST00000474766 MREGQ8N565 214 aa23.21■■□□□ 1.31
SH3D21-202ENST00000474766 ZKSCAN4Q969J2 545 aaPredicted RBP23.21■■□□□ 1.31
SH3D21-202ENST00000474766 ARL8AQ96BM9 186 aa23.21■■□□□ 1.31
SH3D21-202ENST00000474766 SH2D4AQ9H788 454 aa23.21■■□□□ 1.31
SH3D21-202ENST00000474766 ZNF112Q9UJU3 913 aa23.21■■□□□ 1.31
SH3D21-202ENST00000474766 SAMM50Q9Y512 469 aa23.21■■□□□ 1.31
SH3D21-202ENST00000474766 PHF20L1A8MW92 1017 aa23.21■■□□□ 1.31
SH3D21-202ENST00000474766 H0YHG0 523 aa23.21■■□□□ 1.31
SH3D21-202ENST00000474766 AOC2O75106 756 aa23.21■■□□□ 1.31
SH3D21-202ENST00000474766 PSMD2Q13200 908 aa23.21■■□□□ 1.31
SH3D21-202ENST00000474766 HAUS3Q68CZ6 603 aa23.21■■□□□ 1.31
SH3D21-202ENST00000474766 TSEN2Q8NCE0 465 aaKnown RBP23.21■■□□□ 1.31
SH3D21-202ENST00000474766 HDAC7Q8WUI4 952 aa23.21■■□□□ 1.31
SH3D21-202ENST00000474766 ZIC5Q96T25 663 aa23.21■■□□□ 1.31
SH3D21-202ENST00000474766 GLT8D2Q9H1C3 349 aa23.21■■□□□ 1.31
SH3D21-202ENST00000474766 RNF14Q9UBS8 474 aa23.21■■□□□ 1.31
SH3D21-202ENST00000474766 HERC5Q9UII4 1024 aaKnown RBP23.21■■□□□ 1.31
SH3D21-202ENST00000474766 MACROD2A1Z1Q3 448 aa23.2■■□□□ 1.3
SH3D21-202ENST00000474766 CHUKO15111 745 aa23.2■■□□□ 1.3
SH3D21-202ENST00000474766 ECE1P42892 770 aa23.2■■□□□ 1.3
SH3D21-202ENST00000474766 KLK7P49862 253 aa23.2■■□□□ 1.3
SH3D21-202ENST00000474766 NAP1L1P55209 391 aaKnown RBP23.2■■□□□ 1.3
SH3D21-202ENST00000474766 RRP1BQ14684 758 aaKnown RBP23.2■■□□□ 1.3
SH3D21-202ENST00000474766 HYIQ5T013 277 aa23.2■■□□□ 1.3
SH3D21-202ENST00000474766 DYMQ7RTS9 669 aa23.2■■□□□ 1.3
SH3D21-202ENST00000474766 ALS2CR12Q96Q35 445 aa23.2■■□□□ 1.3
SH3D21-202ENST00000474766 OSBPL9Q96SU4 736 aa23.2■■□□□ 1.3
SH3D21-202ENST00000474766 NAP1L4Q99733 375 aaKnown RBP23.2■■□□□ 1.3
SH3D21-202ENST00000474766 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.2■■□□□ 1.3
SH3D21-202ENST00000474766 CEP83Q9Y592 693 aa23.2■■□□□ 1.3
SH3D21-202ENST00000474766 NKRFO15226 690 aaKnown RBP eCLIP23.2■■□□□ 1.37e-7■■□□□ 12.1
SH3D21-202ENST00000474766 LCA5LO95447 670 aa23.2■■□□□ 1.3
SH3D21-202ENST00000474766 PAFAH1B1P43034 410 aa23.2■■□□□ 1.3
SH3D21-202ENST00000474766 LRRC63Q05C16 580 aa23.2■■□□□ 1.3
SH3D21-202ENST00000474766 PDCLQ13371 301 aa23.2■■□□□ 1.3
SH3D21-202ENST00000474766 DDX12PQ92771 950 aa23.2■■□□□ 1.3
SH3D21-202ENST00000474766 CCDC42Q96M95 316 aa23.2■■□□□ 1.3
SH3D21-202ENST00000474766 ELP3Q9H9T3 547 aa23.2■■□□□ 1.3
SH3D21-202ENST00000474766 NYAP2Q9P242 653 aa23.2■■□□□ 1.3
SH3D21-202ENST00000474766 ATAD5Q96QE3 1844 aa23.19■■□□□ 1.3
SH3D21-202ENST00000474766 DOCK1Q14185 1865 aa23.19■■□□□ 1.3
SH3D21-202ENST00000474766 LSP1P33241 339 aa23.19■■□□□ 1.3
SH3D21-202ENST00000474766 SMTNP53814 917 aa23.19■■□□□ 1.3
SH3D21-202ENST00000474766 ATP2B2Q01814 1243 aa23.19■■□□□ 1.3
SH3D21-202ENST00000474766 SEPT2Q15019 361 aa23.19■■□□□ 1.3
SH3D21-202ENST00000474766 ECM1Q16610 540 aa23.19■■□□□ 1.3
SH3D21-202ENST00000474766 FKBP15Q5T1M5 1219 aa23.19■■□□□ 1.3
SH3D21-202ENST00000474766 TATDN1Q6P1N9 297 aa23.19■■□□□ 1.3
SH3D21-202ENST00000474766 IQCKQ8N0W5 287 aa23.19■■□□□ 1.3
SH3D21-202ENST00000474766 ZIM3Q96PE6 472 aa23.19■■□□□ 1.3
SH3D21-202ENST00000474766 SNCAIPQ9Y6H5 919 aa23.19■■□□□ 1.3
SH3D21-202ENST00000474766 DUSP10Q9Y6W6 482 aa23.19■■□□□ 1.3
SH3D21-202ENST00000474766 UNCXA6NJT0 531 aa23.18■■□□□ 1.3
SH3D21-202ENST00000474766 IFT20Q8IY31 132 aa23.18■■□□□ 1.3
SH3D21-202ENST00000474766 DCAF4Q8WV16 495 aa23.18■■□□□ 1.3
SH3D21-202ENST00000474766 DNAJC19Q96DA6 116 aa23.18■■□□□ 1.3
SH3D21-202ENST00000474766 SLC10A4Q96EP9 437 aa23.18■■□□□ 1.3
SH3D21-202ENST00000474766 TSKSQ9UJT2 592 aa23.18■■□□□ 1.3
SH3D21-202ENST00000474766 FGFR1OPO95684 399 aaKnown RBP23.18■■□□□ 1.3
SH3D21-202ENST00000474766 VWA3BQ502W6 1294 aa23.18■■□□□ 1.3
SH3D21-202ENST00000474766 CCDC181Q5TID7 509 aa23.18■■□□□ 1.3
SH3D21-202ENST00000474766 NAA35Q5VZE5 725 aa23.18■■□□□ 1.3
SH3D21-202ENST00000474766 C3orf20Q8ND61 904 aa23.18■■□□□ 1.3
SH3D21-202ENST00000474766 KANSL2Q9H9L4 492 aa23.18■■□□□ 1.3
SH3D21-202ENST00000474766 PCDHA12Q9UN75 941 aa23.18■■□□□ 1.3
SH3D21-202ENST00000474766 SIK3Q9Y2K2 1263 aa23.18■■□□□ 1.3
SH3D21-202ENST00000474766 CSADQ9Y600 493 aa23.18■■□□□ 1.3
SH3D21-202ENST00000474766 EEF2P13639 858 aaKnown RBP23.17■■□□□ 1.3
SH3D21-202ENST00000474766 GJA5P36382 358 aa23.17■■□□□ 1.3
SH3D21-202ENST00000474766 MKRN3Q13064 507 aaKnown RBP23.17■■□□□ 1.3
SH3D21-202ENST00000474766 QRICH1Q2TAL8 776 aa23.17■■□□□ 1.3
SH3D21-202ENST00000474766 LRRC55Q6ZSA7 311 aa23.17■■□□□ 1.3
SH3D21-202ENST00000474766 NDST4Q9H3R1 872 aa23.17■■□□□ 1.3
SH3D21-202ENST00000474766 VCPKMTQ9H867 229 aa23.17■■□□□ 1.3
SH3D21-202ENST00000474766 GDF3Q9NR23 364 aa23.17■■□□□ 1.3
SH3D21-202ENST00000474766 PCDHA13Q9Y5I0 950 aa23.17■■□□□ 1.3
SH3D21-202ENST00000474766 CYP3A7-CYP3A51PA0A087WV96 503 aa23.16■■□□□ 1.3
SH3D21-202ENST00000474766 SLC26A4O43511 780 aa23.16■■□□□ 1.3
SH3D21-202ENST00000474766 PPP1R37O75864 691 aa23.16■■□□□ 1.3
SH3D21-202ENST00000474766 CYP3A7P24462 503 aa23.16■■□□□ 1.3
SH3D21-202ENST00000474766 USP11P51784 963 aa23.16■■□□□ 1.3
SH3D21-202ENST00000474766 ACTN3Q08043 901 aaPredicted RBP23.16■■□□□ 1.3
SH3D21-202ENST00000474766 PAK2Q13177 524 aa23.16■■□□□ 1.3
SH3D21-202ENST00000474766 MAN2A1Q16706 1144 aa23.16■■□□□ 1.3
SH3D21-202ENST00000474766 SHROOM1Q2M3G4 852 aaPredicted RBP23.16■■□□□ 1.3
SH3D21-202ENST00000474766 C8orf74Q6P047 294 aa23.16■■□□□ 1.3
SH3D21-202ENST00000474766 IFIH1Q9BYX4 1025 aaKnown RBP23.16■■□□□ 1.3
SH3D21-202ENST00000474766 PLAGL2Q9UPG8 496 aa23.16■■□□□ 1.3
SH3D21-202ENST00000474766 ZNF263O14978 683 aa23.16■■□□□ 1.3
SH3D21-202ENST00000474766 JAG1P78504 1218 aa23.16■■□□□ 1.3
SH3D21-202ENST00000474766 CYP27A1Q02318 531 aa23.16■■□□□ 1.3
SH3D21-202ENST00000474766 CFAP58Q5T655 872 aa23.16■■□□□ 1.3
SH3D21-202ENST00000474766 WNK4Q96J92 1243 aa23.16■■□□□ 1.3
SH3D21-202ENST00000474766 MBOAT7Q96N66 472 aa23.16■■□□□ 1.3
SH3D21-202ENST00000474766 NT5C3AQ9H0P0 336 aa23.16■■□□□ 1.3
SH3D21-202ENST00000474766 KCNMB3Q9NPA1 279 aa23.16■■□□□ 1.3
SH3D21-202ENST00000474766 CAPN6Q9Y6Q1 641 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms