RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 PARPBPQ9NWS1 579 aa1.53□□□□□ -2.16
HDAC9-222ENST00000474742 HSPBP1Q9NZL4 362 aa1.53□□□□□ -2.16
HDAC9-222ENST00000474742 ARHGAP20Q9P2F6 1191 aa1.53□□□□□ -2.16
HDAC9-222ENST00000474742 ZNHIT2Q9UHR6 403 aa1.53□□□□□ -2.16
HDAC9-222ENST00000474742 ZFP69BQ9UJL9 534 aa1.53□□□□□ -2.16
HDAC9-222ENST00000474742 COQ6Q9Y2Z9 468 aa1.53□□□□□ -2.16
HDAC9-222ENST00000474742 NR2E1Q9Y466 385 aa1.53□□□□□ -2.16
HDAC9-222ENST00000474742 TCRBV16S1A1N1A0A5B0 115 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 ESYT3A0FGR9 886 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 RASSF10A6NK89 507 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 CAPN14A8MX76 684 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 ZNF561-AS1K7EIQ3 104 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 MASP2O00187 686 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 DVL2O14641 736 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 U2SURPO15042 1029 aaKnown RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 CYP27B1O15528 508 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 RPS6KA4O75676 772 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 DNAJC8O75937 253 aaPredicted RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 RAPGEF3O95398 923 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 IL18BPO95998 194 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 ERBB2P04626 1255 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 CHGBP05060 677 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 ZBTB48P10074 688 aaPredicted RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 PDE6AP16499 860 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 FAHP16930 419 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 CSF2RBP32927 897 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 RPS19P39019 145 aaKnown RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 MECP2P51608 486 aaKnown RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 SUMO1P63165 101 aaKnown RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 GABREP78334 506 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 HNRNPA0Q13151 305 aaKnown RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 ZNF460Q14592 562 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 SF3A1Q15459 793 aaKnown RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 C21orf62-AS1Q17RA5 79 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 CCDC142Q17RM4 750 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 SKIDA1Q1XH10 827 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 KIZQ2M2Z5 673 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 PAN2Q504Q3 1202 aaKnown RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 ZMAT1Q5H9K5 638 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 ZKSCAN2Q63HK3 967 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 CREB3L3Q68CJ9 461 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 OVCH1Q7RTY7 1134 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 MAMDC2Q7Z304 686 aaPredicted RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 BRAPQ7Z569 592 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 JAZF1Q86VZ6 243 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 PTRH1Q86Y79 214 aaKnown RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 LDLRAD3Q86YD5 345 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 NOSTRINQ8IVI9 506 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 REXO1L1PQ8IX06 675 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 THEMISQ8N1K5 641 aaPredicted RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 D2HGDHQ8N465 521 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 ZNF808Q8N4W9 903 aaPredicted RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 STPG3Q8N7X2 389 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 TTLL11Q8NHH1 800 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 IL17DQ8TAD2 202 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 WDR48Q8TAF3 677 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 SH3TC2Q8TF17 1288 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 THAP3Q8WTV1 239 aaPredicted RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 CACTINQ8WUQ7 758 aaKnown RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 DRC1Q96MC2 740 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 CDC6Q99741 560 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 DPYSL5Q9BPU6 564 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 ZFYVE21Q9BQ24 234 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 CARD11Q9BXL7 1154 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 ZSWIM4Q9H7M6 989 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 NCOA5Q9HCD5 579 aaKnown RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 SLC2A4RGQ9NR83 387 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 TLR9Q9NR96 1032 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 ADARB2Q9NS39 739 aaKnown RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 AURKAIP1Q9NWT8 199 aaPredicted RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 TMEM260Q9NX78 707 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 BTBD7Q9P203 1132 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 NDOR1Q9UHB4 597 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 PUF60Q9UHX1 559 aaKnown RBP1.52□□□□□ -2.17
HDAC9-222ENST00000474742 OAZ3Q9UMX2 235 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 GIT1Q9Y2X7 761 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 NUB1Q9Y5A7 615 aa1.52□□□□□ -2.17
HDAC9-222ENST00000474742 CCDC66A2RUB6 948 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 FAM47E-STBD1D6RA91 191 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 TRAF5O00463 557 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 PLSCR1O15162 318 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 KLHL18O94889 574 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 RHOBTB3O94955 611 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 MPIG6BO95866 241 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 C4BPAP04003 597 aaKnown RBP1.51□□□□□ -2.17
HDAC9-222ENST00000474742 ENO2P09104 434 aaPredicted RBP1.51□□□□□ -2.17
HDAC9-222ENST00000474742 ZNF888P0CJ79 500 aaPredicted RBP1.51□□□□□ -2.17
HDAC9-222ENST00000474742 GNAT1P11488 350 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 CDK4P11802 303 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 PTPN1P18031 435 aaKnown RBP1.51□□□□□ -2.17
HDAC9-222ENST00000474742 MC4RP32245 332 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 MSX2P35548 267 aaPredicted RBP1.51□□□□□ -2.17
HDAC9-222ENST00000474742 LACTBP83111 547 aaPredicted RBP1.51□□□□□ -2.17
HDAC9-222ENST00000474742 GUCY1A3Q02108 690 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 PAK1Q13153 545 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 CNGB1Q14028 1251 aaPredicted RBP1.51□□□□□ -2.17
HDAC9-222ENST00000474742 GRM7Q14831 915 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 NOLC1Q14978 699 aaKnown RBP eCLIP1.51□□□□□ -2.17
HDAC9-222ENST00000474742 STRIP1Q5VSL9 837 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 CD276Q5ZPR3 534 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms