RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 PPP1R12CQ9BZL4 782 aa17.62■□□□□ 0.41
COL1A1-204ENST00000474644 HIPK3Q9H422 1215 aa17.62■□□□□ 0.41
COL1A1-204ENST00000474644 CFAP45Q9UL16 551 aa17.62■□□□□ 0.41
COL1A1-204ENST00000474644 UMODL1Q5DID0 1318 aa17.62■□□□□ 0.41
COL1A1-204ENST00000474644 WDR81Q562E7 1941 aa17.62■□□□□ 0.41
COL1A1-204ENST00000474644 ZBTB39O15060 712 aa17.61■□□□□ 0.41
COL1A1-204ENST00000474644 ITGB8P26012 769 aa17.61■□□□□ 0.41
COL1A1-204ENST00000474644 RBL2Q08999 1139 aa17.61■□□□□ 0.41
COL1A1-204ENST00000474644 ECM1Q16610 540 aa17.61■□□□□ 0.41
COL1A1-204ENST00000474644 TAF2Q6P1X5 1199 aa17.61■□□□□ 0.41
COL1A1-204ENST00000474644 CCDC155Q8N6L0 562 aa17.61■□□□□ 0.41
COL1A1-204ENST00000474644 KRI1Q8N9T8 703 aaKnown RBP17.61■□□□□ 0.41
COL1A1-204ENST00000474644 CAGE1Q8TC20 777 aa17.61■□□□□ 0.41
COL1A1-204ENST00000474644 CEP89Q96ST8 783 aa17.61■□□□□ 0.41
COL1A1-204ENST00000474644 CSRNP2Q9H175 543 aa17.61■□□□□ 0.41
COL1A1-204ENST00000474644 LTBP2Q14767 1821 aa17.61■□□□□ 0.41
COL1A1-204ENST00000474644 H0YGN5 161 aa17.6■□□□□ 0.41
COL1A1-204ENST00000474644 PITPNM1O00562 1244 aa17.6■□□□□ 0.41
COL1A1-204ENST00000474644 PPP6R2O75170 966 aa17.6■□□□□ 0.41
COL1A1-204ENST00000474644 TIMP1P01033 207 aa17.6■□□□□ 0.41
COL1A1-204ENST00000474644 RAG1P15918 1043 aa17.6■□□□□ 0.41
COL1A1-204ENST00000474644 NCLP19338 710 aaKnown RBP17.6■□□□□ 0.41
COL1A1-204ENST00000474644 MUTP22033 750 aa17.6■□□□□ 0.41
COL1A1-204ENST00000474644 KLRC1P26715 233 aa17.6■□□□□ 0.41
COL1A1-204ENST00000474644 NPEPPSP55786 919 aa17.6■□□□□ 0.41
COL1A1-204ENST00000474644 KRT85P78386 507 aa17.6■□□□□ 0.41
COL1A1-204ENST00000474644 OTUD6AQ7L8S5 288 aa17.6■□□□□ 0.41
COL1A1-204ENST00000474644 ZNF579Q8NAF0 562 aaKnown RBP17.6■□□□□ 0.41
COL1A1-204ENST00000474644 KCNG4Q8TDN1 519 aa17.6■□□□□ 0.41
COL1A1-204ENST00000474644 PIGOQ8TEQ8 1089 aa17.6■□□□□ 0.41
COL1A1-204ENST00000474644 CLIC6Q96NY7 704 aa17.6■□□□□ 0.41
COL1A1-204ENST00000474644 IPO9Q96P70 1041 aaKnown RBP17.6■□□□□ 0.41
COL1A1-204ENST00000474644 WNT8AQ9H1J5 351 aa17.6■□□□□ 0.41
COL1A1-204ENST00000474644 CYP26B1Q9NR63 512 aa17.6■□□□□ 0.41
COL1A1-204ENST00000474644 PCDHA2Q9Y5H9 948 aa17.6■□□□□ 0.41
COL1A1-204ENST00000474644 MYH9P35579 1960 aaKnown RBP17.6■□□□□ 0.41
COL1A1-204ENST00000474644 KDM3AQ9Y4C1 1321 aa17.59■□□□□ 0.41
COL1A1-204ENST00000474644 A0A087WWV3 80 aa17.59■□□□□ 0.41
COL1A1-204ENST00000474644 SMIM35A0A1B0GVV1 85 aa17.59■□□□□ 0.41
COL1A1-204ENST00000474644 CYP2C18P33260 490 aa17.59■□□□□ 0.41
COL1A1-204ENST00000474644 TBC1D8BQ0IIM8 1120 aa17.59■□□□□ 0.41
COL1A1-204ENST00000474644 BFSP2Q13515 415 aa17.59■□□□□ 0.41
COL1A1-204ENST00000474644 XKR9Q5GH70 373 aa17.59■□□□□ 0.41
COL1A1-204ENST00000474644 HYIQ5T013 277 aa17.59■□□□□ 0.41
COL1A1-204ENST00000474644 CABP7Q86V35 215 aa17.59■□□□□ 0.41
COL1A1-204ENST00000474644 CEP170P1Q96L14 293 aa17.59■□□□□ 0.41
COL1A1-204ENST00000474644 NACC1Q96RE7 527 aa17.59■□□□□ 0.41
COL1A1-204ENST00000474644 ANKEF1Q9NU02 776 aa17.59■□□□□ 0.41
COL1A1-204ENST00000474644 DDX19AQ9NUU7 478 aaKnown RBP17.59■□□□□ 0.41
COL1A1-204ENST00000474644 KIAA1024Q9UPX6 916 aa17.59■□□□□ 0.41
COL1A1-204ENST00000474644 MAGEB2O15479 319 aa17.58■□□□□ 0.4
COL1A1-204ENST00000474644 CKBP12277 381 aa17.58■□□□□ 0.4
COL1A1-204ENST00000474644 THPOP40225 353 aa17.58■□□□□ 0.4
COL1A1-204ENST00000474644 UBA7P41226 1012 aa17.58■□□□□ 0.4
COL1A1-204ENST00000474644 RARRES1P49788 294 aa17.58■□□□□ 0.4
COL1A1-204ENST00000474644 GRB10Q13322 594 aa17.58■□□□□ 0.4
COL1A1-204ENST00000474644 ZRSR1Q15695 479 aaKnown RBP17.58■□□□□ 0.4
COL1A1-204ENST00000474644 TMEM119Q4V9L6 283 aa17.58■□□□□ 0.4
COL1A1-204ENST00000474644 SPECC1Q5M775 1068 aa17.58■□□□□ 0.4
COL1A1-204ENST00000474644 TRAF7Q6Q0C0 670 aa17.58■□□□□ 0.4
COL1A1-204ENST00000474644 LINC01465Q8N7H1 131 aa17.58■□□□□ 0.4
COL1A1-204ENST00000474644 DNAJB3Q8WWF6 145 aa17.58■□□□□ 0.4
COL1A1-204ENST00000474644 SYMPKQ92797 1274 aaKnown RBP17.58■□□□□ 0.4
COL1A1-204ENST00000474644 CCDC43Q96MW1 224 aaKnown RBP17.58■□□□□ 0.4
COL1A1-204ENST00000474644 PNMA5Q96PV4 448 aa17.58■□□□□ 0.4
COL1A1-204ENST00000474644 FAM49AQ9H0Q0 323 aaPredicted RBP17.58■□□□□ 0.4
COL1A1-204ENST00000474644 CHMP5Q9NZZ3 219 aa17.58■□□□□ 0.4
COL1A1-204ENST00000474644 DBR1Q9UK59 544 aaKnown RBP17.58■□□□□ 0.4
COL1A1-204ENST00000474644 RCOR1Q9UKL0 485 aa17.58■□□□□ 0.4
COL1A1-204ENST00000474644 PPME1Q9Y570 386 aa17.58■□□□□ 0.4
COL1A1-204ENST00000474644 TANC1Q9C0D5 1861 aa17.58■□□□□ 0.4
COL1A1-204ENST00000474644 ARID2Q68CP9 1835 aa17.57■□□□□ 0.4
COL1A1-204ENST00000474644 SLC26A4O43511 780 aa17.57■□□□□ 0.4
COL1A1-204ENST00000474644 CAND2O75155 1236 aa17.57■□□□□ 0.4
COL1A1-204ENST00000474644 MAFO75444 373 aaPredicted RBP17.57■□□□□ 0.4
COL1A1-204ENST00000474644 CTSHP09668 335 aa17.57■□□□□ 0.4
COL1A1-204ENST00000474644 XRCC6P12956 609 aaKnown RBP eCLIP17.57■□□□□ 0.4
COL1A1-204ENST00000474644 SELPP16109 830 aa17.57■□□□□ 0.4
COL1A1-204ENST00000474644 RFC5P40937 340 aa17.57■□□□□ 0.4
COL1A1-204ENST00000474644 CCL23P55773 120 aa17.57■□□□□ 0.4
COL1A1-204ENST00000474644 ZNF618Q5T7W0 954 aa17.57■□□□□ 0.4
COL1A1-204ENST00000474644 MFSD5Q6N075 450 aa17.57■□□□□ 0.4
COL1A1-204ENST00000474644 USP49Q70CQ1 688 aa17.57■□□□□ 0.4
COL1A1-204ENST00000474644 LRRC8DQ7L1W4 858 aa17.57■□□□□ 0.4
COL1A1-204ENST00000474644 KCNK18Q7Z418 384 aa17.57■□□□□ 0.4
COL1A1-204ENST00000474644 RPAINQ86UA6 219 aa17.57■□□□□ 0.4
COL1A1-204ENST00000474644 LRRC71Q8N4P6 559 aa17.57■□□□□ 0.4
COL1A1-204ENST00000474644 LEO1Q8WVC0 666 aaPredicted RBP17.57■□□□□ 0.4
COL1A1-204ENST00000474644 BADQ92934 168 aa17.57■□□□□ 0.4
COL1A1-204ENST00000474644 EPSTI1Q96J88 318 aa17.57■□□□□ 0.4
COL1A1-204ENST00000474644 CDK5RAP3Q96JB5 506 aa17.57■□□□□ 0.4
COL1A1-204ENST00000474644 IGKV6-21A0A0C4DH24 114 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 E9PMD0 336 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 CUTAO60888 179 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 ME1P48163 572 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 CLCN3P51790 818 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 POLGP54098 1239 aaPredicted RBP17.56■□□□□ 0.4
COL1A1-204ENST00000474644 EMC2Q15006 297 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 KARSQ15046 597 aaKnown RBP17.56■□□□□ 0.4
COL1A1-204ENST00000474644 HABP4Q5JVS0 413 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms