RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 ZNF689Q96CS4 500 aaPredicted RBP21.03■□□□□ 0.96
COL7A1-209ENST00000474432 TMX1Q9H3N1 280 aa21.03■□□□□ 0.96
COL7A1-209ENST00000474432 GABBR1Q9UBS5 961 aa21.03■□□□□ 0.96
COL7A1-209ENST00000474432 BDP1A6H8Y1 2624 aa21.03■□□□□ 0.96
COL7A1-209ENST00000474432 PFKFB2O60825 505 aa21.02■□□□□ 0.96
COL7A1-209ENST00000474432 TDP2O95551 362 aa21.02■□□□□ 0.96
COL7A1-209ENST00000474432 PSAPP07602 524 aa21.02■□□□□ 0.96
COL7A1-209ENST00000474432 KCNQ1P51787 676 aa21.02■□□□□ 0.96
COL7A1-209ENST00000474432 ANAPC15P60006 121 aa21.02■□□□□ 0.96
COL7A1-209ENST00000474432 Q4G0T1 1027 aa21.02■□□□□ 0.96
COL7A1-209ENST00000474432 TMEM192Q8IY95 271 aa21.02■□□□□ 0.96
COL7A1-209ENST00000474432 FAM177A1Q8N128 213 aaPredicted RBP21.02■□□□□ 0.96
COL7A1-209ENST00000474432 SAMD11Q96NU1 681 aa21.02■□□□□ 0.96
COL7A1-209ENST00000474432 RIT2Q99578 217 aa21.02■□□□□ 0.96
COL7A1-209ENST00000474432 TSPYL2Q9H2G4 693 aaPredicted RBP21.02■□□□□ 0.96
COL7A1-209ENST00000474432 GJB4Q9NTQ9 266 aa21.02■□□□□ 0.96
COL7A1-209ENST00000474432 KCNJ14Q9UNX9 436 aa21.02■□□□□ 0.96
COL7A1-209ENST00000474432 MYO7AQ13402 2215 aa21.02■□□□□ 0.96
COL7A1-209ENST00000474432 H3BNC9 293 aa21.01■□□□□ 0.95
COL7A1-209ENST00000474432 PSMD10O75832 226 aa21.01■□□□□ 0.95
COL7A1-209ENST00000474432 DGKIO75912 1065 aa21.01■□□□□ 0.95
COL7A1-209ENST00000474432 SKIV2LQ15477 1246 aaKnown RBP21.01■□□□□ 0.95
COL7A1-209ENST00000474432 UGCGQ16739 394 aa21.01■□□□□ 0.95
COL7A1-209ENST00000474432 TMEM266Q2M3C6 531 aa21.01■□□□□ 0.95
COL7A1-209ENST00000474432 LINC01465Q8N7H1 131 aa21.01■□□□□ 0.95
COL7A1-209ENST00000474432 ADAMTS19Q8TE59 1207 aa21.01■□□□□ 0.95
COL7A1-209ENST00000474432 PHF20Q9BVI0 1012 aa21.01■□□□□ 0.95
COL7A1-209ENST00000474432 UNC45AQ9H3U1 944 aa21.01■□□□□ 0.95
COL7A1-209ENST00000474432 ERVK-5Q9HDB9 667 aa21.01■□□□□ 0.95
COL7A1-209ENST00000474432 NOC2LQ9Y3T9 749 aaKnown RBP21.01■□□□□ 0.95
COL7A1-209ENST00000474432 KIAA1671Q9BY89 1806 aa21■□□□□ 0.95
COL7A1-209ENST00000474432 WDR64B1ANS9 1081 aa21■□□□□ 0.95
COL7A1-209ENST00000474432 AK2P54819 239 aa21■□□□□ 0.95
COL7A1-209ENST00000474432 GALNT17Q6IS24 598 aa21■□□□□ 0.95
COL7A1-209ENST00000474432 CPLX2Q6PUV4 134 aaKnown RBP21■□□□□ 0.95
COL7A1-209ENST00000474432 SLKQ9H2G2 1235 aaPredicted RBP21■□□□□ 0.95
COL7A1-209ENST00000474432 DISC1Q9NRI5 854 aa21■□□□□ 0.95
COL7A1-209ENST00000474432 COG5Q9UP83 839 aa21■□□□□ 0.95
COL7A1-209ENST00000474432 ADGRA3Q8IWK6 1321 aa21■□□□□ 0.95
COL7A1-209ENST00000474432 STK36Q9NRP7 1315 aa21■□□□□ 0.95
COL7A1-209ENST00000474432 M0QZ92 97 aa20.99■□□□□ 0.95
COL7A1-209ENST00000474432 MGEA5O60502 916 aa20.99■□□□□ 0.95
COL7A1-209ENST00000474432 STBD1O95210 358 aa20.99■□□□□ 0.95
COL7A1-209ENST00000474432 SEC24BO95487 1268 aa20.99■□□□□ 0.95
COL7A1-209ENST00000474432 LRCH2Q5VUJ6 765 aa20.99■□□□□ 0.95
COL7A1-209ENST00000474432 MOXD1Q6UVY6 613 aa20.99■□□□□ 0.95
COL7A1-209ENST00000474432 TRMT1LQ7Z2T5 733 aaKnown RBP20.99■□□□□ 0.95
COL7A1-209ENST00000474432 CKAP2LQ8IYA6 745 aa20.99■□□□□ 0.95
COL7A1-209ENST00000474432 ETNPPLQ8TBG4 499 aa20.99■□□□□ 0.95
COL7A1-209ENST00000474432 CLP1Q92989 425 aaKnown RBP20.99■□□□□ 0.95
COL7A1-209ENST00000474432 FTHL17Q9BXU8 183 aa20.99■□□□□ 0.95
COL7A1-209ENST00000474432 C22orf23Q9BZE7 217 aa20.99■□□□□ 0.95
COL7A1-209ENST00000474432 C5orf67F2Z3F1 127 aa20.98■□□□□ 0.95
COL7A1-209ENST00000474432 GAS7O60861 476 aa20.98■□□□□ 0.95
COL7A1-209ENST00000474432 GPR32O75388 356 aa20.98■□□□□ 0.95
COL7A1-209ENST00000474432 LARGE1O95461 756 aa20.98■□□□□ 0.95
COL7A1-209ENST00000474432 FDPSP14324 419 aaKnown RBP20.98■□□□□ 0.95
COL7A1-209ENST00000474432 PAK2Q13177 524 aa20.98■□□□□ 0.95
COL7A1-209ENST00000474432 GPM6BQ13491 265 aa20.98■□□□□ 0.95
COL7A1-209ENST00000474432 FIBCD1Q8N539 461 aa20.98■□□□□ 0.95
COL7A1-209ENST00000474432 HLA-CQ95604 372 aa20.98■□□□□ 0.95
COL7A1-209ENST00000474432 MRPL38Q96DV4 380 aaKnown RBP20.98■□□□□ 0.95
COL7A1-209ENST00000474432 NECAB3Q96P71 396 aaPredicted RBP20.98■□□□□ 0.95
COL7A1-209ENST00000474432 TEKT3Q9BXF9 490 aa20.98■□□□□ 0.95
COL7A1-209ENST00000474432 SAMM50Q9Y512 469 aa20.98■□□□□ 0.95
COL7A1-209ENST00000474432 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.97■□□□□ 0.95
COL7A1-209ENST00000474432 CHMP2AO43633 222 aa20.97■□□□□ 0.95
COL7A1-209ENST00000474432 SLC37A4O43826 429 aa20.97■□□□□ 0.95
COL7A1-209ENST00000474432 VTNP04004 478 aa20.97■□□□□ 0.95
COL7A1-209ENST00000474432 OATP04181 439 aa20.97■□□□□ 0.95
COL7A1-209ENST00000474432 BMPR1AP36894 532 aa20.97■□□□□ 0.95
COL7A1-209ENST00000474432 NONOQ15233 471 aaKnown RBP eCLIP20.97■□□□□ 0.95
COL7A1-209ENST00000474432 TARBP2Q15633 366 aaKnown RBP20.97■□□□□ 0.95
COL7A1-209ENST00000474432 ME3Q16798 604 aa20.97■□□□□ 0.95
COL7A1-209ENST00000474432 INF2Q27J81 1249 aa20.97■□□□□ 0.95
COL7A1-209ENST00000474432 KIZQ2M2Z5 673 aa20.97■□□□□ 0.95
COL7A1-209ENST00000474432 OXER1Q8TDS5 423 aa20.97■□□□□ 0.95
COL7A1-209ENST00000474432 CEP89Q96ST8 783 aa20.97■□□□□ 0.95
COL7A1-209ENST00000474432 PPP1R16BQ96T49 567 aa20.97■□□□□ 0.95
COL7A1-209ENST00000474432 GINS2Q9Y248 185 aa20.97■□□□□ 0.95
COL7A1-209ENST00000474432 TNFRSF10AO00220 468 aa20.96■□□□□ 0.95
COL7A1-209ENST00000474432 CDKL5O76039 1030 aa20.96■□□□□ 0.95
COL7A1-209ENST00000474432 SFNP31947 248 aa20.96■□□□□ 0.95
COL7A1-209ENST00000474432 CLCN3P51790 818 aa20.96■□□□□ 0.95
COL7A1-209ENST00000474432 JAK3P52333 1124 aa20.96■□□□□ 0.95
COL7A1-209ENST00000474432 CRYBB1P53674 252 aaPredicted RBP20.96■□□□□ 0.95
COL7A1-209ENST00000474432 PRKCEQ02156 737 aa20.96■□□□□ 0.95
COL7A1-209ENST00000474432 NFX1Q12986 1120 aaKnown RBP20.96■□□□□ 0.95
COL7A1-209ENST00000474432 EARS2Q5JPH6 523 aaKnown RBP20.96■□□□□ 0.95
COL7A1-209ENST00000474432 KRT25Q7Z3Z0 450 aa20.96■□□□□ 0.95
COL7A1-209ENST00000474432 FAM228AQ86W67 206 aa20.96■□□□□ 0.95
COL7A1-209ENST00000474432 NPAS4Q8IUM7 802 aa20.96■□□□□ 0.95
COL7A1-209ENST00000474432 NECAB1Q8N987 351 aa20.96■□□□□ 0.95
COL7A1-209ENST00000474432 FAM167AQ96KS9 214 aa20.96■□□□□ 0.95
COL7A1-209ENST00000474432 UHRF1Q96T88 793 aaPredicted RBP20.96■□□□□ 0.95
COL7A1-209ENST00000474432 ADAMTS10Q9H324 1103 aa20.96■□□□□ 0.95
COL7A1-209ENST00000474432 TCEAL9Q9UHQ7 104 aa20.96■□□□□ 0.95
COL7A1-209ENST00000474432 ST3GAL5Q9UNP4 418 aa20.96■□□□□ 0.95
COL7A1-209ENST00000474432 FNDC1Q4ZHG4 1894 aaPredicted RBP20.96■□□□□ 0.95
COL7A1-209ENST00000474432 MAGEB2O15479 319 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms