RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 PRR33A8MZF0 331 aa8.49□□□□□ -1.05
VPS50-211ENST00000474412 UPK3BL1B0FP48 263 aa8.49□□□□□ -1.05
VPS50-211ENST00000474412 UPK3BL2E5RIL1 263 aa8.49□□□□□ -1.05
VPS50-211ENST00000474412 ETV3P41162 512 aa8.49□□□□□ -1.05
VPS50-211ENST00000474412 TMEM201Q5SNT2 666 aa8.49□□□□□ -1.05
VPS50-211ENST00000474412 TTC39AQ5SRH9 613 aa8.49□□□□□ -1.05
VPS50-211ENST00000474412 GORABQ5T7V8 394 aa8.49□□□□□ -1.05
VPS50-211ENST00000474412 CDKAL1Q5VV42 579 aa8.49□□□□□ -1.05
VPS50-211ENST00000474412 FKBP1CQ5VVH2 108 aa8.49□□□□□ -1.05
VPS50-211ENST00000474412 C22orf34Q6ZV56 151 aa8.49□□□□□ -1.05
VPS50-211ENST00000474412 WFDC3Q8IUB2 231 aa8.49□□□□□ -1.05
VPS50-211ENST00000474412 FAM43AQ8N2R8 423 aa8.49□□□□□ -1.05
VPS50-211ENST00000474412 CYB5D2Q8WUJ1 264 aa8.49□□□□□ -1.05
VPS50-211ENST00000474412 FAM151AQ8WW52 585 aa8.49□□□□□ -1.05
VPS50-211ENST00000474412 COX4I2Q96KJ9 171 aa8.49□□□□□ -1.05
VPS50-211ENST00000474412 MRIQ9BWK5 157 aa8.49□□□□□ -1.05
VPS50-211ENST00000474412 PIH1D3Q9NQM4 214 aaKnown RBP8.49□□□□□ -1.05
VPS50-211ENST00000474412 ADAMTS1Q9UHI8 967 aa8.49□□□□□ -1.05
VPS50-211ENST00000474412 NOP58Q9Y2X3 529 aaKnown RBP8.49□□□□□ -1.05
VPS50-211ENST00000474412 TNRC18O15417 2968 aaPredicted RBP8.48□□□□□ -1.05
VPS50-211ENST00000474412 CCL15-CCL14A0A0B4J2E2 113 aa8.48□□□□□ -1.05
VPS50-211ENST00000474412 ZNF865P0CJ78 1059 aaPredicted RBP8.48□□□□□ -1.05
VPS50-211ENST00000474412 SOX10P56693 466 aa8.48□□□□□ -1.05
VPS50-211ENST00000474412 IKZF1Q13422 519 aa8.48□□□□□ -1.05
VPS50-211ENST00000474412 CCL15Q16663 113 aa8.48□□□□□ -1.05
VPS50-211ENST00000474412 SHROOM1Q2M3G4 852 aaPredicted RBP8.48□□□□□ -1.05
VPS50-211ENST00000474412 SLC4A8Q2Y0W8 1093 aa8.48□□□□□ -1.05
VPS50-211ENST00000474412 CTU1Q7Z7A3 348 aaKnown RBP8.48□□□□□ -1.05
VPS50-211ENST00000474412 ZGPATQ8N5A5 531 aaKnown RBP8.48□□□□□ -1.05
VPS50-211ENST00000474412 LRRC3Q9BY71 257 aa8.48□□□□□ -1.05
VPS50-211ENST00000474412 ANTXR1Q9H6X2 564 aa8.48□□□□□ -1.05
VPS50-211ENST00000474412 GPR108Q9NPR9 543 aa8.48□□□□□ -1.05
VPS50-211ENST00000474412 RAI14Q9P0K7 980 aa8.48□□□□□ -1.05
VPS50-211ENST00000474412 GPR75-ASB3A0A0A6YYF3 556 aa8.47□□□□□ -1.05
VPS50-211ENST00000474412 GREM1O60565 184 aa8.47□□□□□ -1.05
VPS50-211ENST00000474412 TAL1P17542 331 aaPredicted RBP8.47□□□□□ -1.05
VPS50-211ENST00000474412 FUT4P22083 530 aa8.47□□□□□ -1.05
VPS50-211ENST00000474412 KIR3DL1P43629 444 aa8.47□□□□□ -1.05
VPS50-211ENST00000474412 DYNLL1P63167 89 aaKnown RBP8.47□□□□□ -1.05
VPS50-211ENST00000474412 RRP1BQ14684 758 aaKnown RBP8.47□□□□□ -1.05
VPS50-211ENST00000474412 DCAF15Q66K64 600 aa8.47□□□□□ -1.05
VPS50-211ENST00000474412 AACSQ86V21 672 aa8.47□□□□□ -1.05
VPS50-211ENST00000474412 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.47□□□□□ -1.05
VPS50-211ENST00000474412 CD99L2Q8TCZ2 262 aa8.47□□□□□ -1.05
VPS50-211ENST00000474412 SH3RF3Q8TEJ3 882 aaPredicted RBP8.47□□□□□ -1.05
VPS50-211ENST00000474412 HSPA12BQ96MM6 686 aa8.47□□□□□ -1.05
VPS50-211ENST00000474412 IDI2Q9BXS1 227 aa8.47□□□□□ -1.05
VPS50-211ENST00000474412 ZNF341Q9BYN7 854 aa8.47□□□□□ -1.05
VPS50-211ENST00000474412 BRMS1Q9HCU9 246 aa8.47□□□□□ -1.05
VPS50-211ENST00000474412 METTL5Q9NRN9 209 aaKnown RBP8.47□□□□□ -1.05
VPS50-211ENST00000474412 ZBTB40Q9NUA8 1239 aa8.47□□□□□ -1.05
VPS50-211ENST00000474412 AATFQ9NY61 560 aaKnown RBP eCLIP8.47□□□□□ -1.05
VPS50-211ENST00000474412 ZNF112Q9UJU3 913 aa8.47□□□□□ -1.05
VPS50-211ENST00000474412 CEP131Q9UPN4 1083 aa8.47□□□□□ -1.05
VPS50-211ENST00000474412 CAPN6Q9Y6Q1 641 aa8.47□□□□□ -1.05
VPS50-211ENST00000474412 CENPFP49454 3210 aa8.47□□□□□ -1.05
VPS50-211ENST00000474412 LAMA4Q16363 1823 aa8.47□□□□□ -1.05
VPS50-211ENST00000474412 PLXNA1Q9UIW2 1896 aa8.47□□□□□ -1.05
VPS50-211ENST00000474412 BRCA2P51587 3418 aa8.46□□□□□ -1.05
VPS50-211ENST00000474412 BTBD19C9JJ37 291 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 H3BS24 57 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 FKTNO75072 461 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 ENTPD3O75355 529 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 RECKO95980 971 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 CHGBP05060 677 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 UQCRFS1P1P0C7P4 283 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 FANCCQ00597 558 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 APOBRQ0VD83 1088 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 PPIL2Q13356 520 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 MOGSQ13724 837 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 SEZ6Q53EL9 994 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 ERO1BQ86YB8 467 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 SLFN12Q8IYM2 578 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 PHACTR4Q8IZ21 702 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 DNAJB8Q8NHS0 232 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 RNF34Q969K3 372 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 EDC3Q96F86 508 aaKnown RBP8.46□□□□□ -1.06
VPS50-211ENST00000474412 SPON2Q9BUD6 331 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 ARHGAP39Q9C0H5 1083 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 OSBPL5Q9H0X9 879 aaPredicted RBP8.46□□□□□ -1.06
VPS50-211ENST00000474412 DNAJC18Q9H819 358 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 UBP1Q9NZI7 540 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 LRP2BPQ9P2M1 347 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 DDX19BQ9UMR2 479 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 PCDHB14Q9Y5E9 798 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 FLT1P17948 1338 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 ADGRA2Q96PE1 1338 aa8.46□□□□□ -1.06
VPS50-211ENST00000474412 ZNFX1Q9P2E3 1918 aaKnown RBP8.45□□□□□ -1.06
VPS50-211ENST00000474412 UNCXA6NJT0 531 aa8.45□□□□□ -1.06
VPS50-211ENST00000474412 CHURC1-FNTBB4DL54 471 aa8.45□□□□□ -1.06
VPS50-211ENST00000474412 CTGFP29279 349 aa8.45□□□□□ -1.06
VPS50-211ENST00000474412 MCM4P33991 863 aa8.45□□□□□ -1.06
VPS50-211ENST00000474412 CHMP4BP1P59074 171 aa8.45□□□□□ -1.06
VPS50-211ENST00000474412 ZNF792Q3KQV3 632 aa8.45□□□□□ -1.06
VPS50-211ENST00000474412 NOL9Q5SY16 702 aaKnown RBP8.45□□□□□ -1.06
VPS50-211ENST00000474412 SPTY2D1Q68D10 685 aaPredicted RBP8.45□□□□□ -1.06
VPS50-211ENST00000474412 NAA16Q6N069 864 aaPredicted RBP8.45□□□□□ -1.06
VPS50-211ENST00000474412 OTOP1Q7RTM1 612 aa8.45□□□□□ -1.06
VPS50-211ENST00000474412 MAPKAPK5Q8IW41 473 aa8.45□□□□□ -1.06
VPS50-211ENST00000474412 TEX11Q8IYF3 940 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms