RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 ZNF510Q9Y2H8 683 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 POLR3KQ9Y2Y1 108 aaPredicted RBP8.07□□□□□ -1.12
GPNMB-209ENST00000474157 TTLL3Q9Y4R7 772 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 IKBKGQ9Y6K9 419 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 RTL1A6NKG5 1358 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 PNPLA7Q6ZV29 1317 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 GFRA2O00451 464 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 P4HA2O15460 535 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 ZSCAN12O43309 604 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 SHOX2O60902 331 aaPredicted RBP8.06□□□□□ -1.12
GPNMB-209ENST00000474157 MMEP08473 750 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 CCDC192P0DO97 292 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 ATICP31939 592 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 ZNF165P49910 485 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 INSM1Q01101 510 aaPredicted RBP8.06□□□□□ -1.12
GPNMB-209ENST00000474157 ADCY1Q08828 1119 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 SNX1Q13596 522 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 INAQ16352 499 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.06□□□□□ -1.12
GPNMB-209ENST00000474157 CPLX3Q8WVH0 158 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 NAF1Q96HR8 494 aaKnown RBP8.06□□□□□ -1.12
GPNMB-209ENST00000474157 SPAG5Q96R06 1193 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 FERD3LQ96RJ6 166 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 TSC22D3Q99576 134 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 RNF208Q9H0X6 261 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 VCX3BQ9H321 246 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 ZWILCHQ9H900 591 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 HDAC6Q9UBN7 1215 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 DNAI1Q9UI46 699 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 HOOK1Q9UJC3 728 aaKnown RBP8.06□□□□□ -1.12
GPNMB-209ENST00000474157 STRIP2Q9ULQ0 834 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 CSADQ9Y600 493 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 SNCAIPQ9Y6H5 919 aa8.06□□□□□ -1.12
GPNMB-209ENST00000474157 ALS2Q96Q42 1657 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 PRAMEF27A3QJZ7 478 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 TTI1O43156 1089 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 SMARCA5O60264 1052 aaPredicted RBP8.05□□□□□ -1.12
GPNMB-209ENST00000474157 MGRN1O60291 552 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 ATP6V1G1O75348 118 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 RASSF9O75901 435 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 CCT8P50990 548 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 ZNF132P52740 706 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 HDAC4P56524 1084 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 GNAI1P63096 354 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 SLC7A5Q01650 507 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 CLCQ05315 142 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 E2F5Q15329 346 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 FAAH2Q6GMR7 532 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 NAA16Q6N069 864 aaPredicted RBP8.05□□□□□ -1.12
GPNMB-209ENST00000474157 C12orf40Q86WS4 652 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 REXO1Q8N1G1 1221 aaKnown RBP8.05□□□□□ -1.12
GPNMB-209ENST00000474157 AGGF1Q8N302 714 aaeCLIP8.05□□□□□ -1.12
GPNMB-209ENST00000474157 ZBTB8BQ8NAP8 495 aaPredicted RBP8.05□□□□□ -1.12
GPNMB-209ENST00000474157 NEK9Q8TD19 979 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 TRPC4APQ8TEL6 797 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 SLC35B4Q969S0 331 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 NACC2Q96BF6 587 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 ARMC5Q96C12 935 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 LRRC45Q96CN5 670 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 MAML3Q96JK9 1138 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 NAT10Q9H0A0 1025 aaKnown RBP8.05□□□□□ -1.12
GPNMB-209ENST00000474157 ATXN10Q9UBB4 475 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 PNMA2Q9UL42 364 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 PPP1R9AQ9ULJ8 1098 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 PCDHB14Q9Y5E9 798 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 MRFAP1Q9Y605 127 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 CAPN7Q9Y6W3 813 aa8.05□□□□□ -1.12
GPNMB-209ENST00000474157 COL5A2P05997 1499 aaPredicted RBP8.05□□□□□ -1.12
GPNMB-209ENST00000474157 ARHGEF28Q8N1W1 1705 aaKnown RBP8.04□□□□□ -1.12
GPNMB-209ENST00000474157 PEAK1Q9H792 1746 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 TRPM3Q9HCF6 1732 aaPredicted RBP8.04□□□□□ -1.12
GPNMB-209ENST00000474157 MEGF11A6BM72 1044 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 BIRC5O15392 142 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 TMPRSS2O15393 492 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 MEFVO15553 781 aaPredicted RBP8.04□□□□□ -1.12
GPNMB-209ENST00000474157 ZEB2O60315 1214 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 ZNF189O75820 626 aaPredicted RBP8.04□□□□□ -1.12
GPNMB-209ENST00000474157 TMCC1O94876 653 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 SPATA31C1P0DKV0 1188 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 U2AF1L5P0DN76 240 aaPredicted RBP8.04□□□□□ -1.12
GPNMB-209ENST00000474157 SMARCA1P28370 1054 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 PSMC4P43686 418 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 U2AF1Q01081 240 aaKnown RBP eCLIP8.04□□□□□ -1.12
GPNMB-209ENST00000474157 AKAP17AQ02040 695 aaKnown RBP8.04□□□□□ -1.12
GPNMB-209ENST00000474157 ID3Q02535 119 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 MAP7Q14244 749 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 FBXW10Q5XX13 1052 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 CCDC70Q6NSX1 233 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 DZIP1Q86YF9 867 aaKnown RBP8.04□□□□□ -1.12
GPNMB-209ENST00000474157 CCAR2Q8N163 923 aaKnown RBP8.04□□□□□ -1.12
GPNMB-209ENST00000474157 SPC24Q8NBT2 197 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 WDR66Q8TBY9 1149 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 LEO1Q8WVC0 666 aaPredicted RBP8.04□□□□□ -1.12
GPNMB-209ENST00000474157 SCARF2Q96GP6 870 aaPredicted RBP8.04□□□□□ -1.12
GPNMB-209ENST00000474157 INTS4Q96HW7 963 aaKnown RBP8.04□□□□□ -1.12
GPNMB-209ENST00000474157 MPP4Q96JB8 637 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 ZMAT2Q96NC0 199 aaKnown RBP8.04□□□□□ -1.12
GPNMB-209ENST00000474157 SEZ6LQ9BYH1 1024 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 CYP4F12Q9HCS2 524 aa8.04□□□□□ -1.12
GPNMB-209ENST00000474157 ZCCHC17Q9NP64 241 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms