RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 PTPRAP18433 802 aa23.22■■□□□ 1.31
RNF220-209ENST00000474064 AARSP49588 968 aaKnown RBP eCLIP23.22■■□□□ 1.313e-8■■■■■ 82.4
RNF220-209ENST00000474064 HMGCS2P54868 508 aa23.22■■□□□ 1.31
RNF220-209ENST00000474064 BACE1P56817 501 aa23.22■■□□□ 1.31
RNF220-209ENST00000474064 SETQ01105 290 aaPredicted RBP23.22■■□□□ 1.31
RNF220-209ENST00000474064 MCF2L2Q86YR7 1114 aa23.22■■□□□ 1.31
RNF220-209ENST00000474064 BANK1Q8NDB2 785 aa23.22■■□□□ 1.31
RNF220-209ENST00000474064 GDAP1L1Q96MZ0 367 aa23.22■■□□□ 1.31
RNF220-209ENST00000474064 RPS6P62753 249 aaKnown RBP23.21■■□□□ 1.31
RNF220-209ENST00000474064 RINT1Q6NUQ1 792 aa23.21■■□□□ 1.31
RNF220-209ENST00000474064 DLK2Q6UY11 383 aa23.21■■□□□ 1.31
RNF220-209ENST00000474064 NSMFQ6X4W1 530 aa23.21■■□□□ 1.31
RNF220-209ENST00000474064 SYTL5Q8TDW5 730 aaPredicted RBP23.21■■□□□ 1.31
RNF220-209ENST00000474064 TAAR1Q96RJ0 339 aa23.21■■□□□ 1.31
RNF220-209ENST00000474064 NUP58Q9BVL2 599 aa23.21■■□□□ 1.31
RNF220-209ENST00000474064 TUFT1Q9NNX1 390 aa23.21■■□□□ 1.31
RNF220-209ENST00000474064 KCNH7Q9NS40 1196 aa23.21■■□□□ 1.31
RNF220-209ENST00000474064 USP14P54578 494 aa23.21■■□□□ 1.31
RNF220-209ENST00000474064 SMCR8Q8TEV9 937 aaPredicted RBP23.21■■□□□ 1.31
RNF220-209ENST00000474064 VIPAS39Q9H9C1 493 aa23.21■■□□□ 1.31
RNF220-209ENST00000474064 GPRC5DQ9NZD1 345 aa23.21■■□□□ 1.31
RNF220-209ENST00000474064 ZBED4O75132 1171 aa23.2■■□□□ 1.3
RNF220-209ENST00000474064 CCT5P48643 541 aa23.2■■□□□ 1.3
RNF220-209ENST00000474064 APOBEC3FQ8IUX4 373 aaKnown RBP23.2■■□□□ 1.3
RNF220-209ENST00000474064 ZNF280CQ8ND82 737 aa23.2■■□□□ 1.3
RNF220-209ENST00000474064 MNAT1P51948 309 aa23.2■■□□□ 1.3
RNF220-209ENST00000474064 HIRAP54198 1017 aaPredicted RBP23.2■■□□□ 1.3
RNF220-209ENST00000474064 GSCP56915 257 aaPredicted RBP23.2■■□□□ 1.3
RNF220-209ENST00000474064 ADAM9Q13443 819 aa23.2■■□□□ 1.3
RNF220-209ENST00000474064 GINM1Q9NU53 330 aa23.2■■□□□ 1.3
RNF220-209ENST00000474064 MYO6Q9UM54 1294 aa23.2■■□□□ 1.3
RNF220-209ENST00000474064 EPN1Q9Y6I3 576 aaPredicted RBP23.2■■□□□ 1.3
RNF220-209ENST00000474064 VWA5AO00534 786 aa23.19■■□□□ 1.3
RNF220-209ENST00000474064 NDUFA10O95299 355 aa23.19■■□□□ 1.3
RNF220-209ENST00000474064 MYCLP12524 364 aaPredicted RBP23.19■■□□□ 1.3
RNF220-209ENST00000474064 HOXA7P31268 230 aaPredicted RBP23.19■■□□□ 1.3
RNF220-209ENST00000474064 CXorf56Q9H5V9 222 aa23.19■■□□□ 1.3
RNF220-209ENST00000474064 HPCAL4Q9UM19 191 aa23.19■■□□□ 1.3
RNF220-209ENST00000474064 SIK3Q9Y2K2 1263 aa23.19■■□□□ 1.3
RNF220-209ENST00000474064 RIPK3Q9Y572 518 aa23.19■■□□□ 1.3
RNF220-209ENST00000474064 GCNT3O95395 438 aa23.19■■□□□ 1.3
RNF220-209ENST00000474064 ZBED6P86452 979 aa23.19■■□□□ 1.3
RNF220-209ENST00000474064 RETREG2Q8NC44 543 aa23.19■■□□□ 1.3
RNF220-209ENST00000474064 FAM107BQ9H098 131 aa23.19■■□□□ 1.3
RNF220-209ENST00000474064 TFR2Q9UP52 801 aa23.19■■□□□ 1.3
RNF220-209ENST00000474064 MRPS9P82933 396 aaKnown RBP23.18■■□□□ 1.3
RNF220-209ENST00000474064 KCNA1Q09470 495 aa23.18■■□□□ 1.3
RNF220-209ENST00000474064 TRMT1LQ7Z2T5 733 aaKnown RBP23.18■■□□□ 1.3
RNF220-209ENST00000474064 LXNQ9BS40 222 aa23.18■■□□□ 1.3
RNF220-209ENST00000474064 AS3MTQ9HBK9 375 aa23.18■■□□□ 1.3
RNF220-209ENST00000474064 ZNHIT6Q9NWK9 470 aaKnown RBP23.18■■□□□ 1.3
RNF220-209ENST00000474064 RPTORQ8N122 1335 aa23.18■■□□□ 1.3
RNF220-209ENST00000474064 HOXD13P35453 343 aa23.18■■□□□ 1.3
RNF220-209ENST00000474064 FBXW10Q5XX13 1052 aa23.18■■□□□ 1.3
RNF220-209ENST00000474064 KRT26Q7Z3Y9 468 aa23.18■■□□□ 1.3
RNF220-209ENST00000474064 MYCT1Q8N699 235 aa23.18■■□□□ 1.3
RNF220-209ENST00000474064 ZNF112Q9UJU3 913 aa23.18■■□□□ 1.3
RNF220-209ENST00000474064 FAM13AO94988 1023 aa23.17■■□□□ 1.3
RNF220-209ENST00000474064 NR2F2P24468 414 aa23.17■■□□□ 1.3
RNF220-209ENST00000474064 TKFCQ3LXA3 575 aa23.17■■□□□ 1.3
RNF220-209ENST00000474064 REXO2Q9Y3B8 237 aaKnown RBP23.17■■□□□ 1.3
RNF220-209ENST00000474064 SAMM50Q9Y512 469 aa23.17■■□□□ 1.3
RNF220-209ENST00000474064 FAM169AQ9Y6X4 670 aa23.17■■□□□ 1.3
RNF220-209ENST00000474064 HNRNPH1P31943 449 aaKnown RBP23.17■■□□□ 1.3
RNF220-209ENST00000474064 GGCXP38435 758 aa23.17■■□□□ 1.3
RNF220-209ENST00000474064 KNOP1Q1ED39 458 aaKnown RBP23.17■■□□□ 1.3
RNF220-209ENST00000474064 RNF207Q6ZRF8 634 aa23.17■■□□□ 1.3
RNF220-209ENST00000474064 CEP63Q96MT8 703 aa23.17■■□□□ 1.3
RNF220-209ENST00000474064 CRACR2AQ9BSW2 395 aa23.17■■□□□ 1.3
RNF220-209ENST00000474064 IKZF4Q9H2S9 585 aa23.17■■□□□ 1.3
RNF220-209ENST00000474064 RABEP2Q9H5N1 569 aa23.17■■□□□ 1.3
RNF220-209ENST00000474064 TRIM10Q9UDY6 481 aa23.17■■□□□ 1.3
RNF220-209ENST00000474064 AMPD2Q01433 879 aa23.17■■□□□ 1.3
RNF220-209ENST00000474064 EPHA7Q15375 998 aa23.17■■□□□ 1.3
RNF220-209ENST00000474064 C1orf186Q6ZWK4 172 aa23.17■■□□□ 1.3
RNF220-209ENST00000474064 MIER3Q7Z3K6 550 aa23.17■■□□□ 1.3
RNF220-209ENST00000474064 RMDN3Q96TC7 470 aa23.17■■□□□ 1.3
RNF220-209ENST00000474064 ZC3H4Q9UPT8 1303 aaKnown RBP23.16■■□□□ 1.3
RNF220-209ENST00000474064 EBAG9O00559 213 aa23.16■■□□□ 1.3
RNF220-209ENST00000474064 NMT1P30419 496 aaKnown RBP23.16■■□□□ 1.3
RNF220-209ENST00000474064 ITGB3BPQ13352 177 aaPredicted RBP23.16■■□□□ 1.3
RNF220-209ENST00000474064 MTMR1Q13613 665 aa23.16■■□□□ 1.3
RNF220-209ENST00000474064 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.16■■□□□ 1.3
RNF220-209ENST00000474064 NACC1Q96RE7 527 aa23.16■■□□□ 1.3
RNF220-209ENST00000474064 MAP2K2P36507 400 aa23.16■■□□□ 1.3
RNF220-209ENST00000474064 MAEAQ7L5Y9 396 aa23.16■■□□□ 1.3
RNF220-209ENST00000474064 KSR1Q8IVT5 923 aa23.16■■□□□ 1.3
RNF220-209ENST00000474064 GPC2Q8N158 579 aa23.16■■□□□ 1.3
RNF220-209ENST00000474064 COG1Q8WTW3 980 aa23.16■■□□□ 1.3
RNF220-209ENST00000474064 KLRG1Q96E93 195 aa23.16■■□□□ 1.3
RNF220-209ENST00000474064 RIT2Q99578 217 aa23.16■■□□□ 1.3
RNF220-209ENST00000474064 NHEJ1Q9H9Q4 299 aaPredicted RBP23.16■■□□□ 1.3
RNF220-209ENST00000474064 RNF146Q9NTX7 359 aa23.16■■□□□ 1.3
RNF220-209ENST00000474064 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.16■■□□□ 1.3
RNF220-209ENST00000474064 CETN3O15182 167 aa23.15■■□□□ 1.3
RNF220-209ENST00000474064 ZMYND10O75800 440 aa23.15■■□□□ 1.3
RNF220-209ENST00000474064 PGM5Q15124 567 aa23.15■■□□□ 1.3
RNF220-209ENST00000474064 MEA1Q16626 185 aa23.15■■□□□ 1.3
RNF220-209ENST00000474064 PCNX4Q63HM2 1172 aa23.15■■□□□ 1.3
RNF220-209ENST00000474064 FOXR2Q6PJQ5 311 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms