RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 ZNF658Q5TYW1 1059 aaPredicted RBP16.38■□□□□ 0.21
LMNA-213ENST00000473598 MAMDC4Q6UXC1 1216 aa16.38■□□□□ 0.21
LMNA-213ENST00000473598 CYFIP1Q7L576 1253 aa16.38■□□□□ 0.21
LMNA-213ENST00000473598 DYMQ7RTS9 669 aa16.38■□□□□ 0.21
LMNA-213ENST00000473598 GPBP1Q86WP2 473 aa16.38■□□□□ 0.21
LMNA-213ENST00000473598 FBXO16Q8IX29 292 aaPredicted RBP16.38■□□□□ 0.21
LMNA-213ENST00000473598 DRC7Q8IY82 874 aa16.38■□□□□ 0.21
LMNA-213ENST00000473598 PIGOQ8TEQ8 1089 aa16.38■□□□□ 0.21
LMNA-213ENST00000473598 BHMT2Q9H2M3 363 aa16.38■□□□□ 0.21
LMNA-213ENST00000473598 CWC15Q9P013 229 aaKnown RBP16.38■□□□□ 0.21
LMNA-213ENST00000473598 PVALEFA0A1B0GWK0 134 aa16.38■□□□□ 0.21
LMNA-213ENST00000473598 PTGS1P23219 599 aa16.38■□□□□ 0.21
LMNA-213ENST00000473598 ACTR2P61160 394 aa16.38■□□□□ 0.21
LMNA-213ENST00000473598 UNC13DQ70J99 1090 aa16.38■□□□□ 0.21
LMNA-213ENST00000473598 CCDC186Q7Z3E2 898 aa16.38■□□□□ 0.21
LMNA-213ENST00000473598 CNPY4Q8N129 248 aa16.38■□□□□ 0.21
LMNA-213ENST00000473598 CCDC47Q96A33 483 aaKnown RBP16.38■□□□□ 0.21
LMNA-213ENST00000473598 DNAJC19Q96DA6 116 aa16.38■□□□□ 0.21
LMNA-213ENST00000473598 MAML3Q96JK9 1138 aa16.38■□□□□ 0.21
LMNA-213ENST00000473598 BMP2KQ9NSY1 1161 aaPredicted RBP16.38■□□□□ 0.21
LMNA-213ENST00000473598 SLC5A4Q9NY91 659 aa16.38■□□□□ 0.21
LMNA-213ENST00000473598 ZBTB39O15060 712 aa16.37■□□□□ 0.21
LMNA-213ENST00000473598 LYPLA2O95372 231 aa16.37■□□□□ 0.21
LMNA-213ENST00000473598 PSMC5P62195 406 aa16.37■□□□□ 0.21
LMNA-213ENST00000473598 NCAPHQ15003 741 aa16.37■□□□□ 0.21
LMNA-213ENST00000473598 ARSHQ5FYA8 562 aa16.37■□□□□ 0.21
LMNA-213ENST00000473598 CT47A1Q5JQC4 288 aaPredicted RBP16.37■□□□□ 0.21
LMNA-213ENST00000473598 CTU1Q7Z7A3 348 aaKnown RBP16.37■□□□□ 0.21
LMNA-213ENST00000473598 EXOC1Q9NV70 894 aa16.37■□□□□ 0.21
LMNA-213ENST00000473598 NRBP1Q9UHY1 535 aa16.37■□□□□ 0.21
LMNA-213ENST00000473598 CEP83Q9Y592 693 aa16.37■□□□□ 0.21
LMNA-213ENST00000473598 MYH11P35749 1972 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 IKBKBO14920 756 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 SORBS3O60504 671 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 FARP2O94887 1054 aaPredicted RBP16.36■□□□□ 0.21
LMNA-213ENST00000473598 ATG7O95352 703 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 ARIH2O95376 493 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 PSAPP07602 524 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 SP4Q02446 784 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 MAP2K5Q13163 448 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 UGCGQ16739 394 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 LY6KQ17RY6 165 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 FBXO38Q6PIJ6 1188 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 ABHD15Q6UXT9 468 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 C4orf19Q8IY42 314 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 SMYD4Q8IYR2 804 aaPredicted RBP16.36■□□□□ 0.21
LMNA-213ENST00000473598 NPLOC4Q8TAT6 608 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 ZNF446Q9NWS9 450 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 TELO2Q9Y4R8 837 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 ARID2Q68CP9 1835 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 MYO1CO00159 1063 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 CD44P16070 742 aaKnown RBP16.36■□□□□ 0.21
LMNA-213ENST00000473598 FLT3LGP49771 235 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 TPM4P67936 248 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 MIS18BP1Q6P0N0 1132 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 CCDC62Q6P9F0 684 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 VTA1Q9NP79 307 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.36■□□□□ 0.21
LMNA-213ENST00000473598 SRRDQ9UH36 339 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 GJD2Q9UKL4 321 aa16.36■□□□□ 0.21
LMNA-213ENST00000473598 SYNGAP1Q96PV0 1343 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 PPP1R3GB7ZBB8 358 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 GGPS1O95749 300 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 IDEP14735 1019 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 TTLL4Q14679 1199 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 RINT1Q6NUQ1 792 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 METTL7BQ6UX53 244 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 MSL3Q8N5Y2 521 aaKnown RBP16.35■□□□□ 0.21
LMNA-213ENST00000473598 SCFD2Q8WU76 684 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 USP6NLQ92738 828 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 TINF2Q9BSI4 451 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 PDGFCQ9NRA1 345 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 GABBR1Q9UBS5 961 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 DBR1Q9UK59 544 aaKnown RBP16.35■□□□□ 0.21
LMNA-213ENST00000473598 GDAQ9Y2T3 454 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 NPHP3-ACAD11A0A0J9YXS1 232 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 DKC1O60832 514 aaKnown RBP eCLIP16.35■□□□□ 0.21
LMNA-213ENST00000473598 SNAI1O95863 264 aaPredicted RBP16.35■□□□□ 0.21
LMNA-213ENST00000473598 KRT18P05783 430 aaKnown RBP16.35■□□□□ 0.21
LMNA-213ENST00000473598 HOXC6P09630 235 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 SUPT20HL2P0C7V6 817 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 CCDC172P0C7W6 258 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 ERCC5P28715 1186 aaPredicted RBP16.35■□□□□ 0.21
LMNA-213ENST00000473598 EHHADHQ08426 723 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 GIT2Q14161 759 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 NAA30Q147X3 362 aaPredicted RBP16.35■□□□□ 0.21
LMNA-213ENST00000473598 SWSAP1Q6NVH7 229 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 TAPT1Q6NXT6 567 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 SYT10Q6XYQ8 523 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 ATP6V0A1Q93050 837 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 C16orf45Q96MC5 204 aaPredicted RBP16.35■□□□□ 0.21
LMNA-213ENST00000473598 KATNBL1Q9H079 304 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 PANK4Q9NVE7 773 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 PTCH2Q9Y6C5 1203 aa16.35■□□□□ 0.21
LMNA-213ENST00000473598 RBM47A0AV96 593 aaKnown RBP16.34■□□□□ 0.21
LMNA-213ENST00000473598 TXNP10599 105 aaKnown RBP16.34■□□□□ 0.21
LMNA-213ENST00000473598 CYP2B6P20813 491 aa16.34■□□□□ 0.21
LMNA-213ENST00000473598 YWHABP31946 246 aaKnown RBP16.34■□□□□ 0.21
LMNA-213ENST00000473598 CCDC144BQ3MJ40 725 aa16.34■□□□□ 0.21
LMNA-213ENST00000473598 CELF3Q5SZQ8 465 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms