RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 PPP1R16BQ96T49 567 aa12.99□□□□□ -0.33
CPNE1-222ENST00000473373 YME1L1Q96TA2 773 aa12.99□□□□□ -0.33
CPNE1-222ENST00000473373 UNC45AQ9H3U1 944 aa12.99□□□□□ -0.33
CPNE1-222ENST00000473373 SEPT9Q9UHD8 586 aaPredicted RBP12.99□□□□□ -0.33
CPNE1-222ENST00000473373 MTUS1Q9ULD2 1270 aa12.99□□□□□ -0.33
CPNE1-222ENST00000473373 AKT3Q9Y243 479 aa12.99□□□□□ -0.33
CPNE1-222ENST00000473373 PCDHA2Q9Y5H9 948 aa12.99□□□□□ -0.33
CPNE1-222ENST00000473373 RALGAPA2Q2PPJ7 1873 aa12.98□□□□□ -0.33
CPNE1-222ENST00000473373 ARID2Q68CP9 1835 aa12.98□□□□□ -0.33
CPNE1-222ENST00000473373 MBLAC1A4D2B0 266 aaPredicted RBP12.98□□□□□ -0.33
CPNE1-222ENST00000473373 CHRNA1P02708 482 aa12.98□□□□□ -0.33
CPNE1-222ENST00000473373 ATP2B1P20020 1258 aa12.98□□□□□ -0.33
CPNE1-222ENST00000473373 TMOD1P28289 359 aa12.98□□□□□ -0.33
CPNE1-222ENST00000473373 PRKCEQ02156 737 aa12.98□□□□□ -0.33
CPNE1-222ENST00000473373 PAK2Q13177 524 aa12.98□□□□□ -0.33
CPNE1-222ENST00000473373 GPNMBQ14956 572 aa12.98□□□□□ -0.33
CPNE1-222ENST00000473373 MARCH8Q5T0T0 291 aa12.98□□□□□ -0.33
CPNE1-222ENST00000473373 TRAF7Q6Q0C0 670 aa12.98□□□□□ -0.33
CPNE1-222ENST00000473373 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.98□□□□□ -0.33
CPNE1-222ENST00000473373 IL27Q8NEV9 243 aa12.98□□□□□ -0.33
CPNE1-222ENST00000473373 OXER1Q8TDS5 423 aa12.98□□□□□ -0.33
CPNE1-222ENST00000473373 SLC5A5Q92911 643 aa12.98□□□□□ -0.33
CPNE1-222ENST00000473373 VWCEQ96DN2 955 aa12.98□□□□□ -0.33
CPNE1-222ENST00000473373 C8orf76Q96K31 380 aa12.98□□□□□ -0.33
CPNE1-222ENST00000473373 UHRF1Q96T88 793 aaPredicted RBP12.98□□□□□ -0.33
CPNE1-222ENST00000473373 SH2B1Q9NRF2 756 aaPredicted RBP12.98□□□□□ -0.33
CPNE1-222ENST00000473373 CHD9Q3L8U1 2897 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 IGKV6D-21A0A0A0MT36 114 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 SMIM35A0A1B0GVV1 85 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 DKC1O60832 514 aaKnown RBP eCLIP12.97□□□□□ -0.33
CPNE1-222ENST00000473373 GJB5O95377 273 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 MMP1P03956 469 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 OATP04181 439 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 HMGN5P82970 282 aaKnown RBP12.97□□□□□ -0.33
CPNE1-222ENST00000473373 TBC1D8BQ0IIM8 1120 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 NFX1Q12986 1120 aaKnown RBP12.97□□□□□ -0.33
CPNE1-222ENST00000473373 NR5A1Q13285 461 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 RABEP1Q15276 862 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 SKIV2LQ15477 1246 aaKnown RBP12.97□□□□□ -0.33
CPNE1-222ENST00000473373 MTERF2Q49AM1 385 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 FAM26DQ5JW98 314 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 ODR4Q5SWX8 454 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 KRT40Q6A162 431 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 TSHZ1Q6ZSZ6 1077 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 DIS3L2Q8IYB7 885 aaKnown RBP12.97□□□□□ -0.33
CPNE1-222ENST00000473373 NME8Q8N427 588 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 RDM1Q8NG50 284 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 LENG9Q96B70 501 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 IL17RAQ96F46 866 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 CCDC43Q96MW1 224 aaKnown RBP12.97□□□□□ -0.33
CPNE1-222ENST00000473373 NECAB3Q96P71 396 aaPredicted RBP12.97□□□□□ -0.33
CPNE1-222ENST00000473373 RAD9AQ99638 391 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 SUGCTQ9HAC7 445 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 KIF3AQ9Y496 699 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 INSL6Q9Y581 213 aa12.97□□□□□ -0.33
CPNE1-222ENST00000473373 MAFBQ9Y5Q3 323 aaPredicted RBP12.97□□□□□ -0.33
CPNE1-222ENST00000473373 IGSF9BQ9UPX0 1349 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 CYP3A7-CYP3A51PA0A087WV96 503 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 M0R2N6 131 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 MAGEB2O15479 319 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 SLC37A4O43826 429 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 PSMD10O75832 226 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 FDPSP14324 419 aaKnown RBP12.96□□□□□ -0.33
CPNE1-222ENST00000473373 CYP3A7P24462 503 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 CD52P31358 61 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 CACNB1Q02641 598 aaPredicted RBP12.96□□□□□ -0.33
CPNE1-222ENST00000473373 LPIN1Q14693 890 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 NPY5RQ15761 445 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 TCTN1Q2MV58 587 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 FBXO47Q5MNV8 452 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 NCAPH2Q6IBW4 605 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 EFCAB12Q6NXP0 572 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 RPAINQ86UA6 219 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 SLFN12Q8IYM2 578 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 BANK1Q8NDB2 785 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 FAM20AQ96MK3 541 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 CELF4Q9BZC1 486 aaKnown RBP12.96□□□□□ -0.33
CPNE1-222ENST00000473373 TSPYL2Q9H2G4 693 aaPredicted RBP12.96□□□□□ -0.33
CPNE1-222ENST00000473373 LRFN2Q9ULH4 789 aa12.96□□□□□ -0.33
CPNE1-222ENST00000473373 TTC3P53804 2025 aa12.95□□□□□ -0.34
CPNE1-222ENST00000473373 DENND3A2RUS2 1198 aa12.95□□□□□ -0.34
CPNE1-222ENST00000473373 DDX11L8A8MPP1 907 aa12.95□□□□□ -0.34
CPNE1-222ENST00000473373 BTBD18B2RXH4 712 aa12.95□□□□□ -0.34
CPNE1-222ENST00000473373 RPS6KA5O75582 802 aa12.95□□□□□ -0.34
CPNE1-222ENST00000473373 VTNP04004 478 aa12.95□□□□□ -0.34
CPNE1-222ENST00000473373 DNM2P50570 870 aa12.95□□□□□ -0.34
CPNE1-222ENST00000473373 CLCN3P51790 818 aa12.95□□□□□ -0.34
CPNE1-222ENST00000473373 TFF2Q03403 129 aa12.95□□□□□ -0.34
CPNE1-222ENST00000473373 TAP1Q03518 808 aa12.95□□□□□ -0.34
CPNE1-222ENST00000473373 MGAT3Q09327 533 aa12.95□□□□□ -0.34
CPNE1-222ENST00000473373 CALCRLQ16602 461 aa12.95□□□□□ -0.34
CPNE1-222ENST00000473373 PPP4R3AQ6IN85 833 aa12.95□□□□□ -0.34
CPNE1-222ENST00000473373 LRRC71Q8N4P6 559 aa12.95□□□□□ -0.34
CPNE1-222ENST00000473373 TGS1Q96RS0 853 aaKnown RBP12.95□□□□□ -0.34
CPNE1-222ENST00000473373 LLPHQ9BRT6 129 aaKnown RBP12.95□□□□□ -0.34
CPNE1-222ENST00000473373 FTHL17Q9BXU8 183 aa12.95□□□□□ -0.34
CPNE1-222ENST00000473373 LCHNA4D1U4 455 aa12.94□□□□□ -0.34
CPNE1-222ENST00000473373 FAM205CA6NFA0 338 aa12.94□□□□□ -0.34
CPNE1-222ENST00000473373 RBAK-RBAKDNI3L0D1 243 aa12.94□□□□□ -0.34
CPNE1-222ENST00000473373 RFXAPO00287 272 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms