RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 TREHO43280 583 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 HBP1O60381 514 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 CD4P01730 458 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 PSMC5P62195 406 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 PRKCEQ02156 737 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 CYP4A11Q02928 519 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 CTTNQ14247 550 aaKnown RBP11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 AXDND1Q5T1B0 1012 aaPredicted RBP11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 CCDC183Q5T5S1 534 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 RESP18Q5W5W9 173 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 KANK3Q6NY19 840 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 CAVIN1Q6NZI2 390 aaKnown RBP11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 CCDC155Q8N6L0 562 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 RETREG2Q8NC44 543 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 GPT2Q8TD30 523 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 ATP8B4Q8TF62 1192 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 LMBR1Q8WVP7 490 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 TRAPPC12Q8WVT3 735 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 FAM167AQ96KS9 214 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 NRBP2Q9NSY0 501 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 CCDC39Q9UFE4 941 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 USP25Q9UHP3 1055 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 TBX21Q9UL17 535 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 MAFBQ9Y5Q3 323 aaPredicted RBP11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 RRN3P2A6NIE6 340 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 TIMP1P01033 207 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 OATP04181 439 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 P4HBP07237 508 aaKnown RBP11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 CYP2C18P33260 490 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 UBA7P41226 1012 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 MAGEA10P43363 369 aaPredicted RBP11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 SYKP43405 635 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 QARSP47897 775 aaKnown RBP11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 CCL23P55773 120 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 PTK7Q13308 1070 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 BFSP2Q13515 415 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 HIC1Q14526 733 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 EPHA7Q15375 998 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 LRIT3Q3SXY7 679 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 B3GNT9Q6UX72 402 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 TPH2Q8IWU9 490 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 C4orf32Q8N8J7 132 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 BBXQ8WY36 941 aaPredicted RBP11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 BADQ92934 168 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 ZBTB10Q96DT7 871 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 DYDC2Q96IM9 177 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 EIF2AK1Q9BQI3 630 aaKnown RBP11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 NOC4LQ9BVI4 516 aaKnown RBP11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 CSRNP2Q9H175 543 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 MTMR10Q9NXD2 777 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 RGL1Q9NZL6 768 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 SEPT9Q9UHD8 586 aaPredicted RBP11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 TUBE1Q9UJT0 475 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 KCNH3Q9ULD8 1083 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 STXBP5LQ9Y2K9 1186 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 UMODL1Q5DID0 1318 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 IGSF9BQ9UPX0 1349 aa11.8□□□□□ -0.52
SMARCD3-208ENST00000472789 KAT6AQ92794 2004 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 A0A1B0GVL5 298 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 SLC26A4O43511 780 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 ZNF862O60290 1169 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 DKC1O60832 514 aaKnown RBP eCLIP11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 ATP4AP20648 1035 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 ITGB8P26012 769 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 THPOP40225 353 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 FXR2P51116 673 aaKnown RBP eCLIP11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 SPIRE1Q08AE8 756 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 MTERF2Q49AM1 385 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 ZNF484Q5JVG2 852 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 TMEM199Q8N511 208 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 RASSF8Q8NHQ8 419 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 ERMNQ8TAM6 284 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 CCDC43Q96MW1 224 aaKnown RBP11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 TIGD1Q96MW7 591 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 CLIC6Q96NY7 704 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 LXNQ9BS40 222 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 FAM49AQ9H0Q0 323 aaPredicted RBP11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 NUP62CLQ9H1M0 184 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 DACT1Q9NYF0 836 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 LRWD1Q9UFC0 647 aa11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 MYH9P35579 1960 aaKnown RBP11.79□□□□□ -0.52
SMARCD3-208ENST00000472789 TRIP12Q14669 1992 aaPredicted RBP11.78□□□□□ -0.52
SMARCD3-208ENST00000472789 FAM237AA0A1B0GTK4 181 aa11.78□□□□□ -0.52
SMARCD3-208ENST00000472789 TMEM150BA6NC51 233 aa11.78□□□□□ -0.52
SMARCD3-208ENST00000472789 ZNF202O95125 648 aa11.78□□□□□ -0.52
SMARCD3-208ENST00000472789 CTSHP09668 335 aa11.78□□□□□ -0.52
SMARCD3-208ENST00000472789 PFKFB1P16118 471 aa11.78□□□□□ -0.52
SMARCD3-208ENST00000472789 KLRC1P26715 233 aa11.78□□□□□ -0.52
SMARCD3-208ENST00000472789 CCT6AP40227 531 aaKnown RBP11.78□□□□□ -0.52
SMARCD3-208ENST00000472789 FPGSQ05932 587 aa11.78□□□□□ -0.52
SMARCD3-208ENST00000472789 ZRSR1Q15695 479 aaKnown RBP11.78□□□□□ -0.52
SMARCD3-208ENST00000472789 XKR3Q5GH77 459 aa11.78□□□□□ -0.52
SMARCD3-208ENST00000472789 KRT79Q5XKE5 535 aa11.78□□□□□ -0.52
SMARCD3-208ENST00000472789 SHC4Q6S5L8 630 aa11.78□□□□□ -0.52
SMARCD3-208ENST00000472789 MTHFD1LQ6UB35 978 aa11.78□□□□□ -0.52
SMARCD3-208ENST00000472789 RUFY4Q6ZNE9 571 aa11.78□□□□□ -0.52
SMARCD3-208ENST00000472789 RSPH3Q86UC2 560 aa11.78□□□□□ -0.52
SMARCD3-208ENST00000472789 SERINC5Q86VE9 423 aa11.78□□□□□ -0.52
SMARCD3-208ENST00000472789 CEP57L1Q8IYX8 460 aa11.78□□□□□ -0.52
SMARCD3-208ENST00000472789 TDHQ8IZJ6 230 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms