RNA–Protein interactions for RNA: ENST00000472308.1

SHH-205, Transcript of sonic hedgehog, humanhuman

TSL 1 (best)

Gene SHH, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHH-205ENST00000472308 ADAM2Q99965 735 aa21.1■□□□□ 0.97
SHH-205ENST00000472308 TCF25Q9BQ70 676 aa21.1■□□□□ 0.97
SHH-205ENST00000472308 SPZ1Q9BXG8 430 aa21.1■□□□□ 0.97
SHH-205ENST00000472308 POMKQ9H5K3 350 aa21.1■□□□□ 0.97
SHH-205ENST00000472308 CDHR5Q9HBB8 845 aa21.1■□□□□ 0.97
SHH-205ENST00000472308 JPH1Q9HDC5 661 aaPredicted RBP21.1■□□□□ 0.97
SHH-205ENST00000472308 RGS18Q9NS28 235 aa21.1■□□□□ 0.97
SHH-205ENST00000472308 HOXB8P17481 243 aaPredicted RBP21.09■□□□□ 0.97
SHH-205ENST00000472308 PLCB3Q01970 1234 aa21.09■□□□□ 0.97
SHH-205ENST00000472308 WTAPQ15007 396 aa21.09■□□□□ 0.97
SHH-205ENST00000472308 MTHFD1LQ6UB35 978 aa21.09■□□□□ 0.97
SHH-205ENST00000472308 SLC24A5Q71RS6 500 aa21.09■□□□□ 0.97
SHH-205ENST00000472308 NME8Q8N427 588 aa21.09■□□□□ 0.97
SHH-205ENST00000472308 JADE2Q9NQC1 790 aa21.09■□□□□ 0.97
SHH-205ENST00000472308 NR2E1Q9Y466 385 aa21.09■□□□□ 0.97
SHH-205ENST00000472308 CYP21A2P08686 494 aa21.08■□□□□ 0.97
SHH-205ENST00000472308 PDE4AP27815 886 aa21.08■□□□□ 0.97
SHH-205ENST00000472308 TRDNQ13061 729 aa21.08■□□□□ 0.97
SHH-205ENST00000472308 UBE2SQ16763 222 aa21.08■□□□□ 0.97
SHH-205ENST00000472308 SMC5Q8IY18 1101 aa21.08■□□□□ 0.97
SHH-205ENST00000472308 RRP36Q96EU6 259 aaKnown RBP21.08■□□□□ 0.97
SHH-205ENST00000472308 AZI2Q9H6S1 392 aa21.08■□□□□ 0.97
SHH-205ENST00000472308 ENTPD7Q9NQZ7 604 aa21.08■□□□□ 0.97
SHH-205ENST00000472308 C1orf112Q9NSG2 853 aa21.08■□□□□ 0.97
SHH-205ENST00000472308 SLC9A2Q9UBY0 812 aa21.08■□□□□ 0.97
SHH-205ENST00000472308 ST3GAL5Q9UNP4 418 aa21.08■□□□□ 0.97
SHH-205ENST00000472308 GINS2Q9Y248 185 aa21.08■□□□□ 0.97
SHH-205ENST00000472308 ERICH2A1L162 156 aa21.07■□□□□ 0.96
SHH-205ENST00000472308 DENND3A2RUS2 1198 aa21.07■□□□□ 0.96
SHH-205ENST00000472308 RPS6KA5O75582 802 aa21.07■□□□□ 0.96
SHH-205ENST00000472308 LAG3P18627 525 aa21.07■□□□□ 0.96
SHH-205ENST00000472308 ANTXR2P58335 489 aa21.07■□□□□ 0.96
SHH-205ENST00000472308 ACTR2P61160 394 aa21.07■□□□□ 0.96
SHH-205ENST00000472308 ASTLQ6HA08 431 aaPredicted RBP21.07■□□□□ 0.96
SHH-205ENST00000472308 B4GALNT3Q6L9W6 998 aa21.07■□□□□ 0.96
SHH-205ENST00000472308 LRRC55Q6ZSA7 311 aa21.07■□□□□ 0.96
SHH-205ENST00000472308 PLPPR4Q7Z2D5 763 aa21.07■□□□□ 0.96
SHH-205ENST00000472308 CATIPQ7Z7H3 387 aa21.07■□□□□ 0.96
SHH-205ENST00000472308 MYL10Q9BUA6 226 aa21.07■□□□□ 0.96
SHH-205ENST00000472308 NGRNQ9NPE2 291 aaKnown RBP21.07■□□□□ 0.96
SHH-205ENST00000472308 FRYLO94915 3013 aa21.06■□□□□ 0.96
SHH-205ENST00000472308 ASGR2P07307 311 aa21.06■□□□□ 0.96
SHH-205ENST00000472308 PBX3P40426 434 aa21.06■□□□□ 0.96
SHH-205ENST00000472308 ID4P47928 161 aa21.06■□□□□ 0.96
SHH-205ENST00000472308 FAM189BP81408 668 aa21.06■□□□□ 0.96
SHH-205ENST00000472308 CHD1LQ86WJ1 897 aa21.06■□□□□ 0.96
SHH-205ENST00000472308 KIAA0319LQ8IZA0 1049 aa21.06■□□□□ 0.96
SHH-205ENST00000472308 NKD2Q969F2 451 aaPredicted RBP21.06■□□□□ 0.96
SHH-205ENST00000472308 ADAM7Q9H2U9 754 aa21.06■□□□□ 0.96
SHH-205ENST00000472308 PSTPIP2Q9H939 334 aa21.06■□□□□ 0.96
SHH-205ENST00000472308 KCNH7Q9NS40 1196 aa21.06■□□□□ 0.96
SHH-205ENST00000472308 RNF19AQ9NV58 838 aa21.06■□□□□ 0.96
SHH-205ENST00000472308 TMEM161AQ9NX61 479 aa21.06■□□□□ 0.96
SHH-205ENST00000472308 HCFC2Q9Y5Z7 792 aa21.06■□□□□ 0.96
SHH-205ENST00000472308 MAFGO15525 162 aa21.05■□□□□ 0.96
SHH-205ENST00000472308 PLEKHA8P1O95397 391 aa21.05■□□□□ 0.96
SHH-205ENST00000472308 ARP10275 920 aa21.05■□□□□ 0.96
SHH-205ENST00000472308 KLRC1P26715 233 aa21.05■□□□□ 0.96
SHH-205ENST00000472308 STAT5BP51692 787 aa21.05■□□□□ 0.96
SHH-205ENST00000472308 FAM43BQ6ZT52 329 aaPredicted RBP21.05■□□□□ 0.96
SHH-205ENST00000472308 ADSSL1Q8N142 457 aa21.05■□□□□ 0.96
SHH-205ENST00000472308 CYP2W1Q8TAV3 490 aa21.05■□□□□ 0.96
SHH-205ENST00000472308 IGDCC4Q8TDY8 1250 aa21.05■□□□□ 0.96
SHH-205ENST00000472308 CASP10Q92851 521 aa21.05■□□□□ 0.96
SHH-205ENST00000472308 TNPO1Q92973 898 aaKnown RBP21.05■□□□□ 0.96
SHH-205ENST00000472308 ATP6V0A4Q9HBG4 840 aa21.05■□□□□ 0.96
SHH-205ENST00000472308 PUF60Q9UHX1 559 aaKnown RBP21.05■□□□□ 0.96
SHH-205ENST00000472308 MYO10Q9HD67 2058 aa21.05■□□□□ 0.96
SHH-205ENST00000472308 ITGB3BPQ13352 177 aaPredicted RBP21.04■□□□□ 0.96
SHH-205ENST00000472308 DSC3Q14574 896 aa21.04■□□□□ 0.96
SHH-205ENST00000472308 TPRNQ4KMQ1 711 aa21.04■□□□□ 0.96
SHH-205ENST00000472308 CWF19L1Q69YN2 538 aaKnown RBP21.04■□□□□ 0.96
SHH-205ENST00000472308 KCNT2Q6UVM3 1135 aa21.04■□□□□ 0.96
SHH-205ENST00000472308 FAM228AQ86W67 206 aa21.04■□□□□ 0.96
SHH-205ENST00000472308 SRBD1Q8N5C6 995 aaKnown RBP21.04■□□□□ 0.96
SHH-205ENST00000472308 NECTIN4Q96NY8 510 aa21.04■□□□□ 0.96
SHH-205ENST00000472308 CASD1Q96PB1 797 aa21.04■□□□□ 0.96
SHH-205ENST00000472308 MAP3K14Q99558 947 aa21.04■□□□□ 0.96
SHH-205ENST00000472308 ELAC1Q9H777 363 aaKnown RBP21.04■□□□□ 0.96
SHH-205ENST00000472308 RNF216Q9NWF9 866 aaPredicted RBP21.04■□□□□ 0.96
SHH-205ENST00000472308 SEC63Q9UGP8 760 aaKnown RBP21.04■□□□□ 0.96
SHH-205ENST00000472308 PCDHA6Q9UN73 950 aa21.04■□□□□ 0.96
SHH-205ENST00000472308 PCDHA8Q9Y5H6 950 aa21.04■□□□□ 0.96
SHH-205ENST00000472308 NFASCO94856 1347 aa21.04■□□□□ 0.96
SHH-205ENST00000472308 E7EWF7 191 aa21.03■□□□□ 0.96
SHH-205ENST00000472308 WEE2P0C1S8 567 aa21.03■□□□□ 0.96
SHH-205ENST00000472308 SMARCA1P28370 1054 aa21.03■□□□□ 0.96
SHH-205ENST00000472308 NUCB1Q02818 461 aa21.03■□□□□ 0.96
SHH-205ENST00000472308 ITIH3Q06033 890 aa21.03■□□□□ 0.96
SHH-205ENST00000472308 SART3Q15020 963 aaKnown RBP21.03■□□□□ 0.96
SHH-205ENST00000472308 RALYLQ86SE5 291 aaKnown RBP21.03■□□□□ 0.96
SHH-205ENST00000472308 ZNF654Q8IZM8 581 aa21.03■□□□□ 0.96
SHH-205ENST00000472308 CMTR1Q8N1G2 835 aaKnown RBP21.03■□□□□ 0.96
SHH-205ENST00000472308 TMEM117Q9H0C3 514 aa21.03■□□□□ 0.96
SHH-205ENST00000472308 U3KPZ7 1027 aaPredicted RBP21.03■□□□□ 0.96
SHH-205ENST00000472308 IGKV6D-21A0A0A0MT36 114 aa21.02■□□□□ 0.96
SHH-205ENST00000472308 C2orf71A6NGG8 1288 aa21.02■□□□□ 0.96
SHH-205ENST00000472308 SPDYE3A6NKU9 549 aa21.02■□□□□ 0.96
SHH-205ENST00000472308 ZBTB42B2RXF5 422 aa21.02■□□□□ 0.96
SHH-205ENST00000472308 GPR182O15218 404 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms