RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 FBXO47Q5MNV8 452 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 MARCH8Q5T0T0 291 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 EFCAB12Q6NXP0 572 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 RUFY4Q6ZNE9 571 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 CCDC60Q8IWA6 550 aaPredicted RBP9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 CCDC83Q8IWF9 413 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 SYMPKQ92797 1274 aaKnown RBP9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 WNT8BQ93098 351 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 TOP1MTQ969P6 601 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 AIFM3Q96NN9 605 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 COL25A1Q9BXS0 654 aaPredicted RBP9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 INO80BQ9C086 356 aaPredicted RBP9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 NOL7Q9UMY1 257 aaKnown RBP9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 PCDHA12Q9UN75 941 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 YBX2Q9Y2T7 364 aaKnown RBP9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 TELO2Q9Y4R8 837 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 EVPLQ92817 2033 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 DNAH12Q6ZR08 3092 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 M0R2N6 131 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 ENPP3O14638 875 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 PSMD10O75832 226 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 TDP2O95551 362 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 MMP1P03956 469 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 P4HBP07237 508 aaKnown RBP9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 QARSP47897 775 aaKnown RBP9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 RBM25P49756 843 aaKnown RBP9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 CRYBB1P53674 252 aaPredicted RBP9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 NCBP1Q09161 790 aaKnown RBP9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 TMEM62Q0P6H9 643 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 LPIN1Q14693 890 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 MBTPS1Q14703 1052 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 GPNMBQ14956 572 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 CALCRLQ16602 461 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 PTPROQ16827 1216 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 AAK1Q2M2I8 961 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 KRT40Q6A162 431 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 TRAF7Q6Q0C0 670 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 DIS3L2Q8IYB7 885 aaKnown RBP9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 FIBCD1Q8N539 461 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 NSUN7Q8NE18 718 aaKnown RBP9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 TRAPPC12Q8WVT3 735 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 UNC45AQ9H3U1 944 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 CERS4Q9HA82 394 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 LMCD1Q9NZU5 365 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 SEPT9Q9UHD8 586 aaPredicted RBP9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 PPME1Q9Y570 386 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 PCDHB7Q9Y5E2 793 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 VCANP13611 3396 aa9.4□□□□□ -0.9
TSPAN1-205ENST00000472170 KDM3AQ9Y4C1 1321 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 GBF1Q92538 1859 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 BTBD18B2RXH4 712 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 CTDNEP1O95476 244 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 ATP2B1P20020 1258 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 CD52P31358 61 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 DEFB103AP81534 67 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 PRKCEQ02156 737 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 TAP1Q03518 808 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 PPP2R5CQ13362 524 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 EPHA7Q15375 998 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 CCDC85BQ15834 202 aaPredicted RBP9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 C8orf34Q49A92 452 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 MTERF2Q49AM1 385 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 KIAA0319LQ8IZA0 1049 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 MICALL1Q8N3F8 863 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 FBXO22Q8NEZ5 403 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 ERMNQ8TAM6 284 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 NLRP7Q8WX94 980 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 SLC7A3Q8WY07 619 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 LENG9Q96B70 501 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 VWCEQ96DN2 955 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 MBOAT7Q96N66 472 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 NIFKQ9BYG3 293 aaKnown RBP9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 GCOM2Q9BZD3 368 aaPredicted RBP9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 FOXP1Q9H334 677 aaPredicted RBP9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 ZSWIM4Q9H7M6 989 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 TSHZ2Q9NRE2 1034 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 AAASQ9NRG9 546 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 C1orf112Q9NSG2 853 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 PADI3Q9ULW8 664 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 STK24Q9Y6E0 443 aa9.39□□□□□ -0.91
TSPAN1-205ENST00000472170 IGSF9BQ9UPX0 1349 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 H3BQV1 296 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 ADAMTS3O15072 1205 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 ASAP2O43150 1006 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 HOXA2O43364 376 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 RB1P06400 928 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 FDPSP14324 419 aaKnown RBP9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 TXKP42681 527 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 FOSBP53539 338 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 NLRP11P59045 1033 aaKnown RBP9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 ERVK-21P61565 698 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 MGAT3Q09327 533 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 ORC2Q13416 577 aaPredicted RBP9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 BTG3Q14201 252 aaPredicted RBP9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 TMEM266Q2M3C6 531 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 SPOUT1Q5T280 376 aaKnown RBP9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 NCAPH2Q6IBW4 605 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 NPAS4Q8IUM7 802 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms