RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 RING1Q06587 406 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 PWP2Q15269 919 aaKnown RBP5.29□□□□□ -1.56
LMNB1-205ENST00000472034 PTPROQ16827 1216 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 CCDC144BQ3MJ40 725 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 METTL24Q5JXM2 366 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 TMEM63BQ5T3F8 832 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 PSAPL1Q6NUJ1 521 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 LRSAM1Q6UWE0 723 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 TMTC2Q8N394 836 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 C8orf58Q8NAV2 365 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 KREMEN2Q8NCW0 462 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 ZNF417Q8TAU3 575 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 RIN2Q8WYP3 895 aaPredicted RBP5.29□□□□□ -1.56
LMNB1-205ENST00000472034 RUBCNQ92622 972 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 NSUN5Q96P11 429 aaKnown RBP5.29□□□□□ -1.56
LMNB1-205ENST00000472034 ZNF587Q96SQ5 575 aaPredicted RBP5.29□□□□□ -1.56
LMNB1-205ENST00000472034 CRBNQ96SW2 442 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 MMP19Q99542 508 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 RAD9AQ99638 391 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 FEZ1Q99689 392 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 RBCK1Q9BYM8 510 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 ALDH8A1Q9H2A2 487 aaPredicted RBP5.29□□□□□ -1.56
LMNB1-205ENST00000472034 JPH1Q9HDC5 661 aaPredicted RBP5.29□□□□□ -1.56
LMNB1-205ENST00000472034 SLC5A4Q9NY91 659 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 CLEC1BQ9P126 229 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 TMEM63CQ9P1W3 806 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 CNPY2Q9Y2B0 182 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 USP15Q9Y4E8 981 aaPredicted RBP5.29□□□□□ -1.56
LMNB1-205ENST00000472034 MROH5Q6ZUA9 1318 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 COL4A3Q01955 1670 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 C1QTNF9BB2RNN3 333 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 H3BNC9 293 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 TNFRSF21O75509 655 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 SMNDC1O75940 238 aaKnown RBP eCLIP5.28□□□□□ -1.56
LMNB1-205ENST00000472034 EYA4O95677 639 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 GH2P01242 217 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 PROS1P07225 676 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 C1QTNF9P0C862 333 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 EDN3P14138 238 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 FGFR2P21802 821 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 NDUFV1P49821 464 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 HSP90AA2PQ14568 343 aaPredicted RBP5.28□□□□□ -1.56
LMNB1-205ENST00000472034 KIAA1755Q5JYT7 1200 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 TAF3Q5VWG9 929 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 CCDC105Q8IYK2 499 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 ABRAQ8N0Z2 381 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 CACTIN-AS1Q8N1I8 211 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 SMRP1Q8NCR6 262 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 FLCNQ8NFG4 579 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 KLHDC4Q8TBB5 520 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.28□□□□□ -1.56
LMNB1-205ENST00000472034 NUDT8Q8WV74 236 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 ATG4CQ96DT6 458 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 HAUS7Q99871 368 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 YY1AP1Q9H869 796 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 ANGPTL2Q9UKU9 493 aa5.28□□□□□ -1.56
LMNB1-205ENST00000472034 DDX49Q9Y6V7 483 aaKnown RBP5.28□□□□□ -1.56
LMNB1-205ENST00000472034 HECTD1Q9ULT8 2610 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 MROH7-TTC4A0A0A0MT08 1334 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 A0A1B0GUL7 405 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 A6NHS1 94 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 ZBTB42B2RXF5 422 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 GRM6O15303 877 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 BAIAP3O94812 1187 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 PDE8BO95263 885 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 ALBP02768 609 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 DGKGP49619 791 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 ZNF200P98182 395 aaPredicted RBP5.27□□□□□ -1.57
LMNB1-205ENST00000472034 ADAM15Q13444 863 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 ACVR2BQ13705 512 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 TMEM132BQ14DG7 1078 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 ECM1Q16610 540 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 SOWAHCQ53LP3 525 aaPredicted RBP5.27□□□□□ -1.57
LMNB1-205ENST00000472034 IGSF10Q6WRI0 2623 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.27□□□□□ -1.576e-6■□□□□ 8.1
LMNB1-205ENST00000472034 SND1Q7KZF4 910 aaKnown RBP eCLIP5.27□□□□□ -1.571e-13■■■■■ 27.1
LMNB1-205ENST00000472034 ADGRD2Q7Z7M1 963 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 TSPYL6Q8N831 410 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 C1orf127Q8N9H9 656 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 DTWD2Q8NBA8 298 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 SUMF1Q8NBK3 374 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 TTC9Q92623 222 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 PLD4Q96BZ4 506 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 HNRNPABQ99729 332 aaKnown RBP5.27□□□□□ -1.57
LMNB1-205ENST00000472034 MDFIQ99750 246 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 TEP1Q99973 2627 aaKnown RBP5.27□□□□□ -1.57
LMNB1-205ENST00000472034 PHF7Q9BWX1 381 aaPredicted RBP5.27□□□□□ -1.57
LMNB1-205ENST00000472034 SMG9Q9H0W8 520 aaKnown RBP5.27□□□□□ -1.57
LMNB1-205ENST00000472034 MROH8Q9H579 483 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 CTNNA3Q9UI47 895 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 HERC5Q9UII4 1024 aaKnown RBP5.27□□□□□ -1.57
LMNB1-205ENST00000472034 CDH22Q9UJ99 828 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 BARX2Q9UMQ3 279 aaPredicted RBP5.27□□□□□ -1.57
LMNB1-205ENST00000472034 MYO18BQ8IUG5 2567 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 TRIP12Q14669 1992 aaPredicted RBP5.27□□□□□ -1.57
LMNB1-205ENST00000472034 TENM4Q6N022 2769 aa5.27□□□□□ -1.57
LMNB1-205ENST00000472034 CELSR3Q9NYQ7 3312 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 CNTNAP5Q8WYK1 1306 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 GPR75-ASB3A0A0A6YYF3 556 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 J3QW42 95 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms