RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 BANK1Q8NDB2 785 aa25.53■■□□□ 1.68
C9orf3-213ENST00000471978 ZNF274Q96GC6 653 aaPredicted RBP25.53■■□□□ 1.68
C9orf3-213ENST00000471978 LARP6Q9BRS8 491 aaKnown RBP25.53■■□□□ 1.68
C9orf3-213ENST00000471978 UPF3BQ9BZI7 483 aaKnown RBP25.53■■□□□ 1.68
C9orf3-213ENST00000471978 TM6SF1Q9BZW5 370 aa25.53■■□□□ 1.68
C9orf3-213ENST00000471978 GABBR1Q9UBS5 961 aa25.53■■□□□ 1.68
C9orf3-213ENST00000471978 SAMM50Q9Y512 469 aa25.53■■□□□ 1.68
C9orf3-213ENST00000471978 CPLX1O14810 134 aa25.52■■□□□ 1.68
C9orf3-213ENST00000471978 KCNA5P22460 613 aa25.52■■□□□ 1.68
C9orf3-213ENST00000471978 USP11P51784 963 aa25.52■■□□□ 1.68
C9orf3-213ENST00000471978 NPAS4Q8IUM7 802 aa25.52■■□□□ 1.68
C9orf3-213ENST00000471978 CRIPAKQ8N1N5 446 aa25.52■■□□□ 1.68
C9orf3-213ENST00000471978 CLP1Q92989 425 aaKnown RBP25.52■■□□□ 1.68
C9orf3-213ENST00000471978 C11orf84Q9BUA3 381 aaPredicted RBP25.52■■□□□ 1.68
C9orf3-213ENST00000471978 LOXHD1Q8IVV2 1947 aa25.51■■□□□ 1.67
C9orf3-213ENST00000471978 MSH4O15457 936 aa25.51■■□□□ 1.67
C9orf3-213ENST00000471978 EDIL3O43854 480 aa25.51■■□□□ 1.67
C9orf3-213ENST00000471978 C22orf31O95567 290 aa25.51■■□□□ 1.67
C9orf3-213ENST00000471978 NFX1Q12986 1120 aaKnown RBP25.51■■□□□ 1.67
C9orf3-213ENST00000471978 TMX1Q9H3N1 280 aa25.51■■□□□ 1.67
C9orf3-213ENST00000471978 CDHR5Q9HBB8 845 aa25.51■■□□□ 1.67
C9orf3-213ENST00000471978 WDR64B1ANS9 1081 aa25.5■■□□□ 1.67
C9orf3-213ENST00000471978 RPS6KA5O75582 802 aa25.5■■□□□ 1.67
C9orf3-213ENST00000471978 DEXIO95424 95 aa25.5■■□□□ 1.67
C9orf3-213ENST00000471978 STAG3L1P0CL83 205 aa25.5■■□□□ 1.67
C9orf3-213ENST00000471978 STK3Q13188 491 aa25.5■■□□□ 1.67
C9orf3-213ENST00000471978 LEXMQ3ZCV2 418 aa25.5■■□□□ 1.67
C9orf3-213ENST00000471978 TCEAL5Q5H9L2 206 aa25.5■■□□□ 1.67
C9orf3-213ENST00000471978 METTL13Q8N6R0 699 aa25.5■■□□□ 1.67
C9orf3-213ENST00000471978 NSUN3Q9H649 340 aaKnown RBP25.5■■□□□ 1.67
C9orf3-213ENST00000471978 PDRG1Q9NUG6 133 aa25.5■■□□□ 1.67
C9orf3-213ENST00000471978 PCDHA4Q9UN74 947 aa25.5■■□□□ 1.67
C9orf3-213ENST00000471978 NOC2LQ9Y3T9 749 aaKnown RBP25.5■■□□□ 1.67
C9orf3-213ENST00000471978 CPLX2Q6PUV4 134 aaKnown RBP25.49■■□□□ 1.67
C9orf3-213ENST00000471978 CMTR2Q8IYT2 770 aaKnown RBP25.49■■□□□ 1.67
C9orf3-213ENST00000471978 TBCKQ8TEA7 893 aa25.49■■□□□ 1.67
C9orf3-213ENST00000471978 TMEM40Q8WWA1 233 aa25.49■■□□□ 1.67
C9orf3-213ENST00000471978 PPP1R16BQ96T49 567 aa25.49■■□□□ 1.67
C9orf3-213ENST00000471978 ERVK-5Q9HDB9 667 aa25.49■■□□□ 1.67
C9orf3-213ENST00000471978 DISC1Q9NRI5 854 aa25.49■■□□□ 1.67
C9orf3-213ENST00000471978 LRFN2Q9ULH4 789 aa25.49■■□□□ 1.67
C9orf3-213ENST00000471978 CEP131Q9UPN4 1083 aa25.49■■□□□ 1.67
C9orf3-213ENST00000471978 MYH9P35579 1960 aaKnown RBP25.48■■□□□ 1.67
C9orf3-213ENST00000471978 GRM6O15303 877 aa25.48■■□□□ 1.67
C9orf3-213ENST00000471978 GAS7O60861 476 aa25.48■■□□□ 1.67
C9orf3-213ENST00000471978 IBSPP21815 317 aaPredicted RBP25.48■■□□□ 1.67
C9orf3-213ENST00000471978 KIZQ2M2Z5 673 aa25.48■■□□□ 1.67
C9orf3-213ENST00000471978 SLC5A5Q92911 643 aa25.48■■□□□ 1.67
C9orf3-213ENST00000471978 FAM167AQ96KS9 214 aa25.48■■□□□ 1.67
C9orf3-213ENST00000471978 RIT2Q99578 217 aa25.48■■□□□ 1.67
C9orf3-213ENST00000471978 C22orf23Q9BZE7 217 aa25.48■■□□□ 1.67
C9orf3-213ENST00000471978 LMAN2LQ9H0V9 348 aa25.48■■□□□ 1.67
C9orf3-213ENST00000471978 ST3GAL5Q9UNP4 418 aa25.48■■□□□ 1.67
C9orf3-213ENST00000471978 MRPL42Q9Y6G3 142 aaKnown RBP25.48■■□□□ 1.67
C9orf3-213ENST00000471978 CHMP2AO43633 222 aa25.47■■□□□ 1.67
C9orf3-213ENST00000471978 CRYBB1P53674 252 aaPredicted RBP25.47■■□□□ 1.67
C9orf3-213ENST00000471978 PAN2Q504Q3 1202 aaKnown RBP25.47■■□□□ 1.67
C9orf3-213ENST00000471978 ODR4Q5SWX8 454 aa25.47■■□□□ 1.67
C9orf3-213ENST00000471978 LRCH2Q5VUJ6 765 aa25.47■■□□□ 1.67
C9orf3-213ENST00000471978 FAM43BQ6ZT52 329 aaPredicted RBP25.47■■□□□ 1.67
C9orf3-213ENST00000471978 BLIDQ8IZY5 108 aa25.47■■□□□ 1.67
C9orf3-213ENST00000471978 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.47■■□□□ 1.67
C9orf3-213ENST00000471978 OSMRQ99650 979 aa25.47■■□□□ 1.67
C9orf3-213ENST00000471978 PLVAPQ9BX97 442 aa25.47■■□□□ 1.67
C9orf3-213ENST00000471978 EVPLQ92817 2033 aa25.47■■□□□ 1.67
C9orf3-213ENST00000471978 DENND3A2RUS2 1198 aa25.46■■□□□ 1.67
C9orf3-213ENST00000471978 GPR182O15218 404 aa25.46■■□□□ 1.67
C9orf3-213ENST00000471978 MAGEB2O15479 319 aa25.46■■□□□ 1.67
C9orf3-213ENST00000471978 MGEA5O60502 916 aa25.46■■□□□ 1.67
C9orf3-213ENST00000471978 VTNP04004 478 aa25.46■■□□□ 1.67
C9orf3-213ENST00000471978 SARSP49591 514 aaKnown RBP25.46■■□□□ 1.67
C9orf3-213ENST00000471978 GJA10Q969M2 543 aa25.46■■□□□ 1.67
C9orf3-213ENST00000471978 PABPC5Q96DU9 382 aaKnown RBP25.46■■□□□ 1.67
C9orf3-213ENST00000471978 AIFM3Q96NN9 605 aa25.46■■□□□ 1.67
C9orf3-213ENST00000471978 ADAM2Q99965 735 aa25.46■■□□□ 1.67
C9orf3-213ENST00000471978 TEKT3Q9BXF9 490 aa25.46■■□□□ 1.67
C9orf3-213ENST00000471978 NRBP2Q9NSY0 501 aa25.46■■□□□ 1.67
C9orf3-213ENST00000471978 PCDHB7Q9Y5E2 793 aa25.46■■□□□ 1.67
C9orf3-213ENST00000471978 ZNF862O60290 1169 aa25.45■■□□□ 1.66
C9orf3-213ENST00000471978 GPR32O75388 356 aa25.45■■□□□ 1.66
C9orf3-213ENST00000471978 OATP04181 439 aa25.45■■□□□ 1.66
C9orf3-213ENST00000471978 SFNP31947 248 aa25.45■■□□□ 1.66
C9orf3-213ENST00000471978 GATMP50440 423 aa25.45■■□□□ 1.66
C9orf3-213ENST00000471978 JAK3P52333 1124 aa25.45■■□□□ 1.66
C9orf3-213ENST00000471978 Q4G0T1 1027 aa25.45■■□□□ 1.66
C9orf3-213ENST00000471978 EP400NLQ6ZTU2 488 aa25.45■■□□□ 1.66
C9orf3-213ENST00000471978 NEK9Q8TD19 979 aa25.45■■□□□ 1.66
C9orf3-213ENST00000471978 UNC45AQ9H3U1 944 aa25.45■■□□□ 1.66
C9orf3-213ENST00000471978 ALG13Q9NP73 1137 aaKnown RBP25.45■■□□□ 1.66
C9orf3-213ENST00000471978 RGS18Q9NS28 235 aa25.45■■□□□ 1.66
C9orf3-213ENST00000471978 H3BQ06 376 aaPredicted RBP25.44■■□□□ 1.66
C9orf3-213ENST00000471978 M0R2N6 131 aa25.44■■□□□ 1.66
C9orf3-213ENST00000471978 TDP2O95551 362 aa25.44■■□□□ 1.66
C9orf3-213ENST00000471978 CLCN3P51790 818 aa25.44■■□□□ 1.66
C9orf3-213ENST00000471978 PRKCEQ02156 737 aa25.44■■□□□ 1.66
C9orf3-213ENST00000471978 GALNT17Q6IS24 598 aa25.44■■□□□ 1.66
C9orf3-213ENST00000471978 PTCRAQ6ISU1 281 aaPredicted RBP25.44■■□□□ 1.66
C9orf3-213ENST00000471978 EFCAB12Q6NXP0 572 aa25.44■■□□□ 1.66
C9orf3-213ENST00000471978 FAM228AQ86W67 206 aa25.44■■□□□ 1.66
C9orf3-213ENST00000471978 FAM177A1Q8N128 213 aaPredicted RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms