RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 PCDHA2Q9Y5H9 948 aa16.68■□□□□ 0.26
SSR4-208ENST00000471880 MAFBQ9Y5Q3 323 aaPredicted RBP16.68■□□□□ 0.26
SSR4-208ENST00000471880 TRPV2Q9Y5S1 764 aa16.68■□□□□ 0.26
SSR4-208ENST00000471880 COL4A4P53420 1690 aaPredicted RBP16.68■□□□□ 0.26
SSR4-208ENST00000471880 COL1A2P08123 1366 aa16.67■□□□□ 0.26
SSR4-208ENST00000471880 UNC80Q8N2C7 3258 aa16.67■□□□□ 0.26
SSR4-208ENST00000471880 SMIM35A0A1B0GVV1 85 aa16.67■□□□□ 0.26
SSR4-208ENST00000471880 OATP04181 439 aa16.67■□□□□ 0.26
SSR4-208ENST00000471880 RPLP2P05387 115 aaKnown RBP16.67■□□□□ 0.26
SSR4-208ENST00000471880 ATP4AP20648 1035 aa16.67■□□□□ 0.26
SSR4-208ENST00000471880 UGCGQ16739 394 aa16.67■□□□□ 0.26
SSR4-208ENST00000471880 FAM26DQ5JW98 314 aa16.67■□□□□ 0.26
SSR4-208ENST00000471880 NCAPH2Q6IBW4 605 aa16.67■□□□□ 0.26
SSR4-208ENST00000471880 BANK1Q8NDB2 785 aa16.67■□□□□ 0.26
SSR4-208ENST00000471880 ETNPPLQ8TBG4 499 aa16.67■□□□□ 0.26
SSR4-208ENST00000471880 PPM1EQ8WY54 764 aa16.67■□□□□ 0.26
SSR4-208ENST00000471880 REV3LO60673 3130 aa16.67■□□□□ 0.26
SSR4-208ENST00000471880 IGSF9BQ9UPX0 1349 aa16.67■□□□□ 0.26
SSR4-208ENST00000471880 LPIN1Q14693 890 aa16.66■□□□□ 0.26
SSR4-208ENST00000471880 MTERF2Q49AM1 385 aa16.66■□□□□ 0.26
SSR4-208ENST00000471880 PPP4R3AQ6IN85 833 aa16.66■□□□□ 0.26
SSR4-208ENST00000471880 SPRED2Q7Z698 418 aa16.66■□□□□ 0.26
SSR4-208ENST00000471880 RPAINQ86UA6 219 aa16.66■□□□□ 0.26
SSR4-208ENST00000471880 MICALL1Q8N3F8 863 aa16.66■□□□□ 0.26
SSR4-208ENST00000471880 APBB2Q92870 758 aa16.66■□□□□ 0.26
SSR4-208ENST00000471880 MBOAT7Q96N66 472 aa16.66■□□□□ 0.26
SSR4-208ENST00000471880 SCLT1Q96NL6 688 aa16.66■□□□□ 0.26
SSR4-208ENST00000471880 MTUS1Q9ULD2 1270 aa16.66■□□□□ 0.26
SSR4-208ENST00000471880 AKT3Q9Y243 479 aa16.66■□□□□ 0.26
SSR4-208ENST00000471880 TRANK1O15050 2925 aa16.66■□□□□ 0.26
SSR4-208ENST00000471880 DDX11L8A8MPP1 907 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 ZNF862O60290 1169 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 VTNP04004 478 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 CD52P31358 61 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 CLCN3P51790 818 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 MGAT3Q09327 533 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 PAK2Q13177 524 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 MKRN4PQ13434 485 aaPredicted RBP16.65■□□□□ 0.26
SSR4-208ENST00000471880 CALCRLQ16602 461 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 FBXO47Q5MNV8 452 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 TSHZ1Q6ZSZ6 1077 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 LRRC71Q8N4P6 559 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 RDM1Q8NG50 284 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 MAFAQ8NHW3 353 aaPredicted RBP16.65■□□□□ 0.26
SSR4-208ENST00000471880 ARNTL2Q8WYA1 636 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 FAM20AQ96MK3 541 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 MAP7D2Q96T17 732 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 SH2D3AQ9BRG2 576 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 CELF4Q9BZC1 486 aaKnown RBP16.65■□□□□ 0.26
SSR4-208ENST00000471880 SUGCTQ9HAC7 445 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 GTF3C3Q9Y5Q9 886 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 NLRC5Q86WI3 1866 aa16.65■□□□□ 0.26
SSR4-208ENST00000471880 LCHNA4D1U4 455 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 TMEM150BA6NC51 233 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 NEMFO60524 1076 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 GJB5O95377 273 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 C22orf31O95567 290 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 TMOD1P28289 359 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 TBC1D8BQ0IIM8 1120 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 NFX1Q12986 1120 aaKnown RBP16.64■□□□□ 0.25
SSR4-208ENST00000471880 ADGRE1Q14246 886 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 TMEM266Q2M3C6 531 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 EFCAB12Q6NXP0 572 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 SLFN12Q8IYM2 578 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 NME8Q8N427 588 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 SLC17A8Q8NDX2 589 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 ZNF668Q96K58 619 aaPredicted RBP16.64■□□□□ 0.25
SSR4-208ENST00000471880 YME1L1Q96TA2 773 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 RAD9AQ99638 391 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 KCNMB3Q9NPA1 279 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 KIF3AQ9Y496 699 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 CUL9Q8IWT3 2517 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 A0A0C4DFX4 3053 aa16.64■□□□□ 0.25
SSR4-208ENST00000471880 BRWD1Q9NSI6 2320 aa16.63■□□□□ 0.25
SSR4-208ENST00000471880 ATG2AQ2TAZ0 1938 aa16.63■□□□□ 0.25
SSR4-208ENST00000471880 ZBTB42B2RXF5 422 aa16.63■□□□□ 0.25
SSR4-208ENST00000471880 EML1O00423 815 aa16.63■□□□□ 0.25
SSR4-208ENST00000471880 MAGEB2O15479 319 aa16.63■□□□□ 0.25
SSR4-208ENST00000471880 MCM7P33993 719 aa16.63■□□□□ 0.25
SSR4-208ENST00000471880 TXKP42681 527 aa16.63■□□□□ 0.25
SSR4-208ENST00000471880 KIZQ2M2Z5 673 aa16.63■□□□□ 0.25
SSR4-208ENST00000471880 MCTP1Q6DN14 999 aa16.63■□□□□ 0.25
SSR4-208ENST00000471880 KIAA0319LQ8IZA0 1049 aa16.63■□□□□ 0.25
SSR4-208ENST00000471880 USP38Q8NB14 1042 aa16.63■□□□□ 0.25
SSR4-208ENST00000471880 TNFRSF25Q93038 417 aa16.63■□□□□ 0.25
SSR4-208ENST00000471880 TBC1D32Q96NH3 1257 aa16.63■□□□□ 0.25
SSR4-208ENST00000471880 AGO3Q9H9G7 860 aaKnown RBP16.63■□□□□ 0.25
SSR4-208ENST00000471880 TTC3P53804 2025 aa16.62■□□□□ 0.25
SSR4-208ENST00000471880 RFXAPO00287 272 aa16.62■□□□□ 0.25
SSR4-208ENST00000471880 TBX3O15119 743 aa16.62■□□□□ 0.25
SSR4-208ENST00000471880 DKC1O60832 514 aaKnown RBP eCLIP16.62■□□□□ 0.25
SSR4-208ENST00000471880 RPS6KA5O75582 802 aa16.62■□□□□ 0.25
SSR4-208ENST00000471880 PSMC5P62195 406 aa16.62■□□□□ 0.25
SSR4-208ENST00000471880 CYP4A11Q02928 519 aa16.62■□□□□ 0.25
SSR4-208ENST00000471880 TAP1Q03518 808 aa16.62■□□□□ 0.25
SSR4-208ENST00000471880 PPP2R5CQ13362 524 aa16.62■□□□□ 0.25
SSR4-208ENST00000471880 CCDC85BQ15834 202 aaPredicted RBP16.62■□□□□ 0.25
SSR4-208ENST00000471880 XKR3Q5GH77 459 aa16.62■□□□□ 0.25
SSR4-208ENST00000471880 PLA2G4FQ68DD2 849 aa16.62■□□□□ 0.25
SSR4-208ENST00000471880 HAS1Q92839 578 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms