RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, human

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1-208	ENST00000471250	TMEM150B	A6NC51	233 aa		28.69	■■■□□ 2.18
U2AF1-208	ENST00000471250	EIF3D	O15371	548 aa	Known RBP eCLIP	28.69	■■■□□ 2.18
U2AF1-208	ENST00000471250	SPECC1L	Q69YQ0	1117 aa		28.69	■■■□□ 2.18
U2AF1-208	ENST00000471250	PPP4R3CP	Q6ZMV5	832 aa		28.69	■■■□□ 2.18
U2AF1-208	ENST00000471250	LRRC55	Q6ZSA7	311 aa		28.69	■■■□□ 2.18
U2AF1-208	ENST00000471250	FIZ1	Q96SL8	496 aa		28.69	■■■□□ 2.18
U2AF1-208	ENST00000471250	TLL2	Q9Y6L7	1015 aa		28.69	■■■□□ 2.18
U2AF1-208	ENST00000471250	IGKV6D-21	A0A0A0MT36	114 aa		28.68	■■■□□ 2.18
U2AF1-208	ENST00000471250	USO1	O60763	962 aa	Known RBP	28.68	■■■□□ 2.18
U2AF1-208	ENST00000471250	TBX2	Q13207	712 aa	Predicted RBP	28.68	■■■□□ 2.18
U2AF1-208	ENST00000471250	ARID5B	Q14865	1188 aa		28.68	■■■□□ 2.18
U2AF1-208	ENST00000471250	PTPN21	Q16825	1174 aa		28.68	■■■□□ 2.18
U2AF1-208	ENST00000471250	PLA2G4F	Q68DD2	849 aa		28.68	■■■□□ 2.18
U2AF1-208	ENST00000471250	GPR142	Q7Z601	462 aa		28.68	■■■□□ 2.18
U2AF1-208	ENST00000471250	MCM3AP	O60318	1980 aa		28.68	■■■□□ 2.18
U2AF1-208	ENST00000471250	PRPF6	O94906	941 aa	Known RBP	28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	ARIH2	O95376	493 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	GCNT3	O95395	438 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	GGPS1	O95749	300 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	MAPK4	P31152	587 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	NPEPPS	P55786	919 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	FKBP3	Q00688	224 aa	Known RBP	28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	LY6K	Q17RY6	165 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	KNOP1	Q1ED39	458 aa	Known RBP	28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	METTL7B	Q6UX53	244 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	ZNF467	Q7Z7K2	595 aa	Predicted RBP	28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	CCDC150	Q8NCX0	1101 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	GPBP1L1	Q9HC44	474 aa	Predicted RBP	28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	MAFB	Q9Y5Q3	323 aa	Predicted RBP	28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	GSTTP1	A0A1W2PQM5	241 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	NMT1	P30419	496 aa	Known RBP	28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	HOXD13	P35453	343 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	LRMP	Q12912	555 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	GRB14	Q14449	540 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	EDRF1	Q3B7T1	1238 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	ODR4	Q5SWX8	454 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	ARMCX2	Q7L311	632 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	PLEKHH3	Q7Z736	793 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	FBXO16	Q8IX29	292 aa	Predicted RBP	28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	ZC3H3	Q8IXZ2	948 aa	Known RBP	28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	CEP63	Q96MT8	703 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	TUBGCP2	Q9BSJ2	902 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	ZNF302	Q9NR11	478 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	TRAF3IP3	Q9Y228	551 aa		28.67	■■■□□ 2.18
U2AF1-208	ENST00000471250	ARID2	Q68CP9	1835 aa		28.66	■■■□□ 2.18
U2AF1-208	ENST00000471250	MYH9	P35579	1960 aa	Known RBP	28.66	■■■□□ 2.18
U2AF1-208	ENST00000471250	UBE4B	O95155	1302 aa		28.66	■■■□□ 2.18
U2AF1-208	ENST00000471250	INHBE	P58166	350 aa		28.66	■■■□□ 2.18
U2AF1-208	ENST00000471250	PRKCE	Q02156	737 aa		28.66	■■■□□ 2.18
U2AF1-208	ENST00000471250	ARMCX5	Q6P1M9	558 aa		28.66	■■■□□ 2.18
U2AF1-208	ENST00000471250	ZNF720	Q7Z2F6	126 aa		28.66	■■■□□ 2.18
U2AF1-208	ENST00000471250	FAM178B	Q8IXR5	827 aa		28.66	■■■□□ 2.18
U2AF1-208	ENST00000471250	EEF2KMT	Q96G04	330 aa		28.66	■■■□□ 2.18
U2AF1-208	ENST00000471250	SH2D3A	Q9BRG2	576 aa		28.66	■■■□□ 2.18
U2AF1-208	ENST00000471250	RRAGD	Q9NQL2	400 aa	Predicted RBP	28.66	■■■□□ 2.18
U2AF1-208	ENST00000471250	LGALS16	A8MUM7	142 aa		28.65	■■■□□ 2.18
U2AF1-208	ENST00000471250	MAPT	P10636	758 aa	Known RBP	28.65	■■■□□ 2.18
U2AF1-208	ENST00000471250	XKR3	Q5GH77	459 aa		28.65	■■■□□ 2.18
U2AF1-208	ENST00000471250	CCDC62	Q6P9F0	684 aa		28.65	■■■□□ 2.18
U2AF1-208	ENST00000471250	MLXIP	Q9HAP2	919 aa		28.65	■■■□□ 2.18
U2AF1-208	ENST00000471250	LARS	Q9P2J5	1176 aa	Known RBP	28.65	■■■□□ 2.18
U2AF1-208	ENST00000471250	CPA4	Q9UI42	421 aa		28.65	■■■□□ 2.18
U2AF1-208	ENST00000471250	PDXK	O00764	312 aa		28.64	■■■□□ 2.18
U2AF1-208	ENST00000471250	KIF3C	O14782	793 aa		28.64	■■■□□ 2.18
U2AF1-208	ENST00000471250	MTIF2	P46199	727 aa	Known RBP	28.64	■■■□□ 2.18
U2AF1-208	ENST00000471250	TAF1C	Q15572	869 aa	Predicted RBP	28.64	■■■□□ 2.18
U2AF1-208	ENST00000471250	CELF3	Q5SZQ8	465 aa	Known RBP	28.64	■■■□□ 2.18
U2AF1-208	ENST00000471250	STXBP4	Q6ZWJ1	553 aa		28.64	■■■□□ 2.18
U2AF1-208	ENST00000471250	MAEA	Q7L5Y9	396 aa		28.64	■■■□□ 2.18
U2AF1-208	ENST00000471250	TRMT1L	Q7Z2T5	733 aa	Known RBP	28.64	■■■□□ 2.18
U2AF1-208	ENST00000471250	SEPT1	Q8WYJ6	367 aa		28.64	■■■□□ 2.18
U2AF1-208	ENST00000471250	CEP170P1	Q96L14	293 aa		28.64	■■■□□ 2.18
U2AF1-208	ENST00000471250	DRC1	Q96MC2	740 aa		28.64	■■■□□ 2.18
U2AF1-208	ENST00000471250	DIS3	Q9Y2L1	958 aa	Known RBP	28.64	■■■□□ 2.18
U2AF1-208	ENST00000471250	ITIH6	Q6UXX5	1313 aa		28.64	■■■□□ 2.18
U2AF1-208	ENST00000471250	FAM155A	B1AL88	458 aa	Predicted RBP	28.64	■■■□□ 2.17
U2AF1-208	ENST00000471250	TPM2	P07951	284 aa		28.64	■■■□□ 2.17
U2AF1-208	ENST00000471250	ATP4A	P20648	1035 aa		28.64	■■■□□ 2.17
U2AF1-208	ENST00000471250	IFNL1	Q8IU54	200 aa		28.64	■■■□□ 2.17
U2AF1-208	ENST00000471250	SMC1B	Q8NDV3	1235 aa		28.64	■■■□□ 2.17
U2AF1-208	ENST00000471250	STRA6	Q9BX79	667 aa		28.64	■■■□□ 2.17
U2AF1-208	ENST00000471250	TYW1	Q9NV66	732 aa	Known RBP	28.64	■■■□□ 2.17
U2AF1-208	ENST00000471250	ZNF236	Q9UL36	1845 aa		28.63	■■■□□ 2.17
U2AF1-208	ENST00000471250	CALU	O43852	315 aa	Predicted RBP	28.63	■■■□□ 2.17
U2AF1-208	ENST00000471250	PLS3	P13797	630 aa		28.63	■■■□□ 2.17
U2AF1-208	ENST00000471250	CCDC102A	Q96A19	550 aa		28.63	■■■□□ 2.17
U2AF1-208	ENST00000471250	PCYT2	Q99447	389 aa		28.63	■■■□□ 2.17
U2AF1-208	ENST00000471250	SEPT9	Q9UHD8	586 aa	Predicted RBP	28.63	■■■□□ 2.17
U2AF1-208	ENST00000471250	PYCARD	Q9ULZ3	195 aa		28.63	■■■□□ 2.17
U2AF1-208	ENST00000471250	PCDHB13	Q9Y5F0	798 aa		28.63	■■■□□ 2.17
U2AF1-208	ENST00000471250	SLC15A5	A6NIM6	579 aa		28.62	■■■□□ 2.17
U2AF1-208	ENST00000471250	PRKCSH	P14314	528 aa	Predicted RBP	28.62	■■■□□ 2.17
U2AF1-208	ENST00000471250	SFPQ	P23246	707 aa	Known RBP eCLIP	28.62	■■■□□ 2.17
U2AF1-208	ENST00000471250	TTLL4	Q14679	1199 aa		28.62	■■■□□ 2.17
U2AF1-208	ENST00000471250	MAMDC4	Q6UXC1	1216 aa		28.62	■■■□□ 2.17
U2AF1-208	ENST00000471250	DPP9	Q86TI2	863 aa		28.62	■■■□□ 2.17
U2AF1-208	ENST00000471250	AFAP1L1	Q8TED9	768 aa		28.62	■■■□□ 2.17
U2AF1-208	ENST00000471250	SCFD2	Q8WU76	684 aa		28.62	■■■□□ 2.17
U2AF1-208	ENST00000471250	VTA1	Q9NP79	307 aa		28.62	■■■□□ 2.17
U2AF1-208	ENST00000471250	CYP26B1	Q9NR63	512 aa		28.62	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms