RNA–Protein interactions for RNA: ENST00000471047.1

CLK2-204, Transcript of CDC like kinase 2, humanhuman

TSL 3

Gene CLK2, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-204ENST00000471047 SLC5A4Q9NY91 659 aa10.98□□□□□ -0.65
CLK2-204ENST00000471047 DDX41Q9UJV9 622 aaKnown RBP10.98□□□□□ -0.65
CLK2-204ENST00000471047 DNM3Q9UQ16 869 aa10.98□□□□□ -0.65
CLK2-204ENST00000471047 SYNGAP1Q96PV0 1343 aa10.98□□□□□ -0.65
CLK2-204ENST00000471047 NCOR1O75376 2440 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 IGKV6D-21A0A0A0MT36 114 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 PVALEFA0A1B0GWK0 134 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 DNM1LO00429 736 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 XRCC6P12956 609 aaKnown RBP eCLIP10.97□□□□□ -0.651e-7■■■■■ 61.2
CLK2-204ENST00000471047 CYP11B2P19099 503 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 QARSP47897 775 aaKnown RBP10.97□□□□□ -0.65
CLK2-204ENST00000471047 ZNF165P49910 485 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 MRE11P49959 708 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 ACTR2P61160 394 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 EHHADHQ08426 723 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 NEDD9Q14511 834 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 IQCB1Q15051 598 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 ARSHQ5FYA8 562 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 GJC2Q5T442 439 aaPredicted RBP10.97□□□□□ -0.65
CLK2-204ENST00000471047 ISM2Q6H9L7 571 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 EEPD1Q7L9B9 569 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 TPH2Q8IWU9 490 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 FBXO16Q8IX29 292 aaPredicted RBP10.97□□□□□ -0.65
CLK2-204ENST00000471047 C4orf19Q8IY42 314 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 BANK1Q8NDB2 785 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 TRPV1Q8NER1 839 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 DDX12PQ92771 950 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 NACC1Q96RE7 527 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 TINF2Q9BSI4 451 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 ZSWIM4Q9H7M6 989 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 PDLIM7Q9NR12 457 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 RMND1Q9NWS8 449 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.97□□□□□ -0.65
CLK2-204ENST00000471047 DDX20Q9UHI6 824 aaKnown RBP10.97□□□□□ -0.65
CLK2-204ENST00000471047 TCEAL9Q9UHQ7 104 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 TELO2Q9Y4R8 837 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 PCDHA10Q9Y5I2 948 aa10.97□□□□□ -0.65
CLK2-204ENST00000471047 LTBP2Q14767 1821 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 TRIM43BA6NCK2 446 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 SNAI1O95863 264 aaPredicted RBP10.96□□□□□ -0.65
CLK2-204ENST00000471047 ITGB8P26012 769 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 CNGA1P29973 690 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 EPHB4P54760 987 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 PSMC5P62195 406 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 DHX8Q14562 1220 aaKnown RBP10.96□□□□□ -0.65
CLK2-204ENST00000471047 UGCGQ16739 394 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 LY6KQ17RY6 165 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 TRIM60Q495X7 471 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 KMT5BQ4FZB7 885 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 CT47A1Q5JQC4 288 aaPredicted RBP10.96□□□□□ -0.65
CLK2-204ENST00000471047 CELF3Q5SZQ8 465 aaKnown RBP10.96□□□□□ -0.65
CLK2-204ENST00000471047 ZNF658Q5TYW1 1059 aaPredicted RBP10.96□□□□□ -0.65
CLK2-204ENST00000471047 MFSD14CQ5VZR4 134 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 METTL7BQ6UX53 244 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 UNC13DQ70J99 1090 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 CYFIP1Q7L576 1253 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 MLKLQ8NB16 471 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 PIGOQ8TEQ8 1089 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 SCFD2Q8WU76 684 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 TRIM43Q96BQ3 446 aaPredicted RBP10.96□□□□□ -0.65
CLK2-204ENST00000471047 BHMT2Q9H2M3 363 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 CBX8Q9HC52 389 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 DBR1Q9UK59 544 aaKnown RBP10.96□□□□□ -0.65
CLK2-204ENST00000471047 SAMM50Q9Y512 469 aa10.96□□□□□ -0.65
CLK2-204ENST00000471047 REV3LO60673 3130 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 FRMPD3Q5JV73 1810 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 IGSF9BQ9UPX0 1349 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 GSTTP1A0A1W2PQM5 241 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 FRMD3A2A2Y4 597 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 ZBTB39O15060 712 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 ZNF862O60290 1169 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 STBD1O95210 358 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 GGPS1O95749 300 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 PSAPP07602 524 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 SUPT20HL2P0C7V6 817 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 CYP2C19P33261 490 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 ASIC1P78348 528 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 TTLL4Q14679 1199 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 UVSSAQ2YD98 709 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 COBLL1Q53SF7 1204 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 OLFML2BQ68BL8 750 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 SLC39A5Q6ZMH5 540 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 C1orf186Q6ZWK4 172 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 GPBP1Q86WP2 473 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 CCDC60Q8IWA6 550 aaPredicted RBP10.95□□□□□ -0.66
CLK2-204ENST00000471047 RNF214Q8ND24 703 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 PPM1EQ8WY54 764 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 RNPC3Q96LT9 517 aaKnown RBP10.95□□□□□ -0.66
CLK2-204ENST00000471047 GTPBP4Q9BZE4 634 aaKnown RBP10.95□□□□□ -0.66
CLK2-204ENST00000471047 NAT10Q9H0A0 1025 aaKnown RBP10.95□□□□□ -0.66
CLK2-204ENST00000471047 ABHD16BQ9H3Z7 469 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 PDGFCQ9NRA1 345 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 KCND2Q9NZV8 630 aa10.95□□□□□ -0.66
CLK2-204ENST00000471047 PPP1R3GB7ZBB8 358 aa10.94□□□□□ -0.66
CLK2-204ENST00000471047 DKC1O60832 514 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLK2-204ENST00000471047 SSBP05455 408 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLK2-204ENST00000471047 TXNP10599 105 aaKnown RBP10.94□□□□□ -0.66
CLK2-204ENST00000471047 CD44P16070 742 aaKnown RBP10.94□□□□□ -0.66
CLK2-204ENST00000471047 HOXD11P31277 338 aaPredicted RBP10.94□□□□□ -0.66
CLK2-204ENST00000471047 RARRES1P49788 294 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms