RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 LMBR1Q8WVP7 490 aa14.12□□□□□ -0.15
SND1-209ENST00000470723 SYMPKQ92797 1274 aaKnown RBP14.12□□□□□ -0.15
SND1-209ENST00000470723 KIAA1024Q9UPX6 916 aa14.12□□□□□ -0.15
SND1-209ENST00000470723 DNM3Q9UQ16 869 aa14.12□□□□□ -0.15
SND1-209ENST00000470723 PCDHA2Q9Y5H9 948 aa14.12□□□□□ -0.15
SND1-209ENST00000470723 MAFO75444 373 aaPredicted RBP14.11□□□□□ -0.15
SND1-209ENST00000470723 NCLP19338 710 aaKnown RBP14.11□□□□□ -0.15
SND1-209ENST00000470723 MARK3P27448 753 aa14.11□□□□□ -0.15
SND1-209ENST00000470723 ATN1P54259 1190 aaPredicted RBP14.11□□□□□ -0.15
SND1-209ENST00000470723 FAAP100Q0VG06 881 aa14.11□□□□□ -0.15
SND1-209ENST00000470723 SPECC1Q5M775 1068 aa14.11□□□□□ -0.15
SND1-209ENST00000470723 MTHFD1LQ6UB35 978 aa14.11□□□□□ -0.15
SND1-209ENST00000470723 SERINC5Q86VE9 423 aa14.11□□□□□ -0.15
SND1-209ENST00000470723 CKAP2LQ8IYA6 745 aa14.11□□□□□ -0.15
SND1-209ENST00000470723 CALML4Q96GE6 196 aa14.11□□□□□ -0.15
SND1-209ENST00000470723 HTATIP2Q9BUP3 242 aa14.11□□□□□ -0.15
SND1-209ENST00000470723 DHX33Q9H6R0 707 aaKnown RBP14.11□□□□□ -0.15
SND1-209ENST00000470723 CYP26B1Q9NR63 512 aa14.11□□□□□ -0.15
SND1-209ENST00000470723 TRPC6Q9Y210 931 aa14.11□□□□□ -0.15
SND1-209ENST00000470723 KDM3AQ9Y4C1 1321 aa14.11□□□□□ -0.15
SND1-209ENST00000470723 DCDC2CA8MYV0 355 aa14.1□□□□□ -0.15
SND1-209ENST00000470723 TREHO43280 583 aa14.1□□□□□ -0.15
SND1-209ENST00000470723 EYA4O95677 639 aa14.1□□□□□ -0.15
SND1-209ENST00000470723 KLRC1P26715 233 aa14.1□□□□□ -0.15
SND1-209ENST00000470723 RARRES1P49788 294 aa14.1□□□□□ -0.15
SND1-209ENST00000470723 FXR1P51114 621 aaKnown RBP eCLIP14.1□□□□□ -0.151e-7■■□□□ 12.2
SND1-209ENST00000470723 NPEPPSP55786 919 aa14.1□□□□□ -0.15
SND1-209ENST00000470723 RTP1P59025 263 aa14.1□□□□□ -0.15
SND1-209ENST00000470723 ZNF200P98182 395 aaPredicted RBP14.1□□□□□ -0.15
SND1-209ENST00000470723 RBL2Q08999 1139 aa14.1□□□□□ -0.15
SND1-209ENST00000470723 PTK7Q13308 1070 aa14.1□□□□□ -0.15
SND1-209ENST00000470723 PTGISQ16647 500 aa14.1□□□□□ -0.15
SND1-209ENST00000470723 TRIM60Q495X7 471 aa14.1□□□□□ -0.15
SND1-209ENST00000470723 NME8Q8N427 588 aa14.1□□□□□ -0.15
SND1-209ENST00000470723 LINC01465Q8N7H1 131 aa14.1□□□□□ -0.15
SND1-209ENST00000470723 PIGOQ8TEQ8 1089 aa14.1□□□□□ -0.15
SND1-209ENST00000470723 TRPV6Q9H1D0 765 aa14.1□□□□□ -0.15
SND1-209ENST00000470723 BLOC1S4Q9NUP1 217 aa14.1□□□□□ -0.15
SND1-209ENST00000470723 TRMT13Q9NUP7 481 aaKnown RBP14.1□□□□□ -0.15
SND1-209ENST00000470723 DDX19AQ9NUU7 478 aaKnown RBP14.1□□□□□ -0.15
SND1-209ENST00000470723 HPSEQ9Y251 543 aa14.1□□□□□ -0.15
SND1-209ENST00000470723 EVPLQ92817 2033 aa14.1□□□□□ -0.15
SND1-209ENST00000470723 A0A087WWV3 80 aa14.09□□□□□ -0.15
SND1-209ENST00000470723 SMIM35A0A1B0GVV1 85 aa14.09□□□□□ -0.15
SND1-209ENST00000470723 B4GALT4O60513 344 aa14.09□□□□□ -0.15
SND1-209ENST00000470723 C22orf31O95567 290 aa14.09□□□□□ -0.15
SND1-209ENST00000470723 RPLP2P05387 115 aaKnown RBP14.09□□□□□ -0.15
SND1-209ENST00000470723 RFC5P40937 340 aa14.09□□□□□ -0.15
SND1-209ENST00000470723 CSPP1Q1MSJ5 1256 aa14.09□□□□□ -0.15
SND1-209ENST00000470723 TRIM71Q2Q1W2 868 aaKnown RBP14.09□□□□□ -0.15
SND1-209ENST00000470723 NAALADL2Q58DX5 795 aa14.09□□□□□ -0.15
SND1-209ENST00000470723 XKR9Q5GH70 373 aa14.09□□□□□ -0.15
SND1-209ENST00000470723 TAF2Q6P1X5 1199 aa14.09□□□□□ -0.15
SND1-209ENST00000470723 POTEGQ6S5H5 508 aa14.09□□□□□ -0.15
SND1-209ENST00000470723 KCNK18Q7Z418 384 aa14.09□□□□□ -0.15
SND1-209ENST00000470723 KIAA0319LQ8IZA0 1049 aa14.09□□□□□ -0.15
SND1-209ENST00000470723 ZNF710Q8N1W2 664 aa14.09□□□□□ -0.15
SND1-209ENST00000470723 SYT2Q8N9I0 419 aaPredicted RBP14.09□□□□□ -0.15
SND1-209ENST00000470723 LRRC15Q8TF66 581 aa14.09□□□□□ -0.15
SND1-209ENST00000470723 CEP170P1Q96L14 293 aa14.09□□□□□ -0.15
SND1-209ENST00000470723 JPH2Q9BR39 696 aaPredicted RBP14.09□□□□□ -0.15
SND1-209ENST00000470723 GDPD2Q9HCC8 539 aa14.09□□□□□ -0.15
SND1-209ENST00000470723 CCDC39Q9UFE4 941 aa14.09□□□□□ -0.15
SND1-209ENST00000470723 TBX21Q9UL17 535 aa14.09□□□□□ -0.15
SND1-209ENST00000470723 A0A087X0B3 334 aa14.08□□□□□ -0.16
SND1-209ENST00000470723 TMEM150BA6NC51 233 aa14.08□□□□□ -0.16
SND1-209ENST00000470723 E9PMD0 336 aa14.08□□□□□ -0.16
SND1-209ENST00000470723 KIAA0355O15063 1070 aa14.08□□□□□ -0.16
SND1-209ENST00000470723 TLR3O15455 904 aaKnown RBP14.08□□□□□ -0.16
SND1-209ENST00000470723 DGAT1O75907 488 aa14.08□□□□□ -0.16
SND1-209ENST00000470723 CYP11B2P19099 503 aa14.08□□□□□ -0.16
SND1-209ENST00000470723 TXLNAP40222 546 aa14.08□□□□□ -0.16
SND1-209ENST00000470723 MKRN4PQ13434 485 aaPredicted RBP14.08□□□□□ -0.16
SND1-209ENST00000470723 KARSQ15046 597 aaKnown RBP14.08□□□□□ -0.16
SND1-209ENST00000470723 E2F4Q16254 413 aa14.08□□□□□ -0.16
SND1-209ENST00000470723 FAM47CQ5HY64 1035 aa14.08□□□□□ -0.16
SND1-209ENST00000470723 FAM26DQ5JW98 314 aa14.08□□□□□ -0.16
SND1-209ENST00000470723 RRAGBQ5VZM2 374 aa14.08□□□□□ -0.16
SND1-209ENST00000470723 CCDC73Q6ZRK6 1079 aa14.08□□□□□ -0.16
SND1-209ENST00000470723 C1orf186Q6ZWK4 172 aa14.08□□□□□ -0.16
SND1-209ENST00000470723 PPP1R13LQ8WUF5 828 aa14.08□□□□□ -0.16
SND1-209ENST00000470723 TRAPPC12Q8WVT3 735 aa14.08□□□□□ -0.16
SND1-209ENST00000470723 PYM1Q9BRP8 204 aaKnown RBP14.08□□□□□ -0.16
SND1-209ENST00000470723 FAM13BQ9NYF5 915 aa14.08□□□□□ -0.16
SND1-209ENST00000470723 STK17AQ9UEE5 414 aa14.08□□□□□ -0.16
SND1-209ENST00000470723 SEPT9Q9UHD8 586 aaPredicted RBP14.08□□□□□ -0.16
SND1-209ENST00000470723 TUBE1Q9UJT0 475 aa14.08□□□□□ -0.16
SND1-209ENST00000470723 GAS2O43903 313 aaKnown RBP14.07□□□□□ -0.16
SND1-209ENST00000470723 PQBP1O60828 265 aaKnown RBP14.07□□□□□ -0.16
SND1-209ENST00000470723 CAND2O75155 1236 aa14.07□□□□□ -0.16
SND1-209ENST00000470723 PLCG1P19174 1290 aa14.07□□□□□ -0.16
SND1-209ENST00000470723 SLC12A3P55017 1021 aa14.07□□□□□ -0.16
SND1-209ENST00000470723 CHMP4BP1P59074 171 aa14.07□□□□□ -0.16
SND1-209ENST00000470723 CDC42EP1Q00587 391 aa14.07□□□□□ -0.16
SND1-209ENST00000470723 TBC1D8BQ0IIM8 1120 aa14.07□□□□□ -0.16
SND1-209ENST00000470723 MTERF2Q49AM1 385 aa14.07□□□□□ -0.16
SND1-209ENST00000470723 PLA2G4FQ68DD2 849 aa14.07□□□□□ -0.16
SND1-209ENST00000470723 EFCAB12Q6NXP0 572 aa14.07□□□□□ -0.16
SND1-209ENST00000470723 TRMT1LQ7Z2T5 733 aaKnown RBP14.07□□□□□ -0.16
SND1-209ENST00000470723 IQUBQ8NA54 791 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms