RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 DGKIO75912 1065 aa10.19□□□□□ -0.78
XRN1-208ENST00000470537 HOXA13P31271 388 aaPredicted RBP10.19□□□□□ -0.78
XRN1-208ENST00000470537 ZXDAP98168 799 aa10.19□□□□□ -0.78
XRN1-208ENST00000470537 INSM1Q01101 510 aaPredicted RBP10.19□□□□□ -0.78
XRN1-208ENST00000470537 SIGLEC14Q08ET2 396 aa10.19□□□□□ -0.78
XRN1-208ENST00000470537 COASYQ13057 564 aa10.19□□□□□ -0.78
XRN1-208ENST00000470537 NMIQ13287 307 aaPredicted RBP10.19□□□□□ -0.78
XRN1-208ENST00000470537 PDE12Q6L8Q7 609 aaKnown RBP10.19□□□□□ -0.78
XRN1-208ENST00000470537 CYFIP1Q7L576 1253 aa10.19□□□□□ -0.78
XRN1-208ENST00000470537 NLRX1Q86UT6 975 aa10.19□□□□□ -0.78
XRN1-208ENST00000470537 TBC1D10CQ8IV04 446 aa10.19□□□□□ -0.78
XRN1-208ENST00000470537 CMTR2Q8IYT2 770 aaKnown RBP10.19□□□□□ -0.78
XRN1-208ENST00000470537 EFHBQ8N7U6 833 aa10.19□□□□□ -0.78
XRN1-208ENST00000470537 CUL5Q93034 780 aa10.19□□□□□ -0.78
XRN1-208ENST00000470537 MTMR8Q96EF0 704 aa10.19□□□□□ -0.78
XRN1-208ENST00000470537 INPP4AQ96PE3 977 aaPredicted RBP10.19□□□□□ -0.78
XRN1-208ENST00000470537 GPR20Q99678 358 aa10.19□□□□□ -0.78
XRN1-208ENST00000470537 EHMT1Q9H9B1 1298 aa10.19□□□□□ -0.78
XRN1-208ENST00000470537 ERAP1Q9NZ08 941 aa10.19□□□□□ -0.78
XRN1-208ENST00000470537 ZNF318Q5VUA4 2279 aa10.19□□□□□ -0.78
XRN1-208ENST00000470537 NLRC5Q86WI3 1866 aa10.19□□□□□ -0.78
XRN1-208ENST00000470537 MYO7AQ13402 2215 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 NEDD4P46934 1319 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 PNMA6FA0A0J9YX94 578 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 RRN3P2A6NIE6 340 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 LOC730098B7Z3J9 87 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 HOXA2O43364 376 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 CHRNA1P02708 482 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 GHRP10912 638 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 ATF7P17544 494 aaPredicted RBP10.18□□□□□ -0.78
XRN1-208ENST00000470537 SDSP20132 328 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 WNT7BP56706 349 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 ADAM17P78536 824 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 UBE3AQ05086 875 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 DLX2Q07687 328 aaPredicted RBP10.18□□□□□ -0.78
XRN1-208ENST00000470537 SART3Q15020 963 aaKnown RBP10.18□□□□□ -0.78
XRN1-208ENST00000470537 ODR4Q5SWX8 454 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 TSHZ1Q6ZSZ6 1077 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 ZNF589Q86UQ0 364 aaPredicted RBP10.18□□□□□ -0.78
XRN1-208ENST00000470537 SMRP1Q8NCR6 262 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 MICAL1Q8TDZ2 1067 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 LMBR1Q8WVP7 490 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 ZNF689Q96CS4 500 aaPredicted RBP10.18□□□□□ -0.78
XRN1-208ENST00000470537 MSLNLQ96KJ4 702 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 CDCA3Q99618 268 aaPredicted RBP10.18□□□□□ -0.78
XRN1-208ENST00000470537 DSCC1Q9BVC3 393 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 PHF7Q9BWX1 381 aaPredicted RBP10.18□□□□□ -0.78
XRN1-208ENST00000470537 TLE6Q9H808 572 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 ALG13Q9NP73 1137 aaKnown RBP10.18□□□□□ -0.78
XRN1-208ENST00000470537 DIAPH3Q9NSV4 1193 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 STK17AQ9UEE5 414 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 PCDHB15Q9Y5E8 787 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 PCDHB12Q9Y5F1 795 aa10.18□□□□□ -0.78
XRN1-208ENST00000470537 PALM3A6NDB9 673 aaPredicted RBP10.17□□□□□ -0.78
XRN1-208ENST00000470537 OPLAHO14841 1288 aa10.17□□□□□ -0.78
XRN1-208ENST00000470537 MAFGO15525 162 aa10.17□□□□□ -0.78
XRN1-208ENST00000470537 TBX10O75333 385 aa10.17□□□□□ -0.78
XRN1-208ENST00000470537 SKOR1P84550 965 aa10.17□□□□□ -0.78
XRN1-208ENST00000470537 PPFIA1Q13136 1202 aa10.17□□□□□ -0.78
XRN1-208ENST00000470537 CBX2Q14781 532 aaPredicted RBP10.17□□□□□ -0.78
XRN1-208ENST00000470537 UTP14CQ5TAP6 766 aaKnown RBP10.17□□□□□ -0.78
XRN1-208ENST00000470537 HOMER1Q86YM7 354 aa10.17□□□□□ -0.78
XRN1-208ENST00000470537 NPAS4Q8IUM7 802 aa10.17□□□□□ -0.78
XRN1-208ENST00000470537 SMARCC2Q8TAQ2 1214 aa10.17□□□□□ -0.78
XRN1-208ENST00000470537 SPPL3Q8TCT6 385 aa10.17□□□□□ -0.78
XRN1-208ENST00000470537 SEPT1Q8WYJ6 367 aa10.17□□□□□ -0.78
XRN1-208ENST00000470537 ATOH1Q92858 354 aaPredicted RBP10.17□□□□□ -0.78
XRN1-208ENST00000470537 GLG1Q92896 1179 aa10.17□□□□□ -0.78
XRN1-208ENST00000470537 SMARCAD1Q9H4L7 1026 aa10.17□□□□□ -0.78
XRN1-208ENST00000470537 TUBE1Q9UJT0 475 aa10.17□□□□□ -0.78
XRN1-208ENST00000470537 LRFN2Q9ULH4 789 aa10.17□□□□□ -0.78
XRN1-208ENST00000470537 CFAP54Q96N23 3096 aa10.16□□□□□ -0.78
XRN1-208ENST00000470537 TERTO14746 1132 aaKnown RBP10.16□□□□□ -0.78
XRN1-208ENST00000470537 NRIP1P48552 1158 aa10.16□□□□□ -0.78
XRN1-208ENST00000470537 RRP1P56182 461 aaKnown RBP10.16□□□□□ -0.78
XRN1-208ENST00000470537 LPIN1Q14693 890 aa10.16□□□□□ -0.78
XRN1-208ENST00000470537 FBXO47Q5MNV8 452 aa10.16□□□□□ -0.78
XRN1-208ENST00000470537 PCNX4Q63HM2 1172 aa10.16□□□□□ -0.78
XRN1-208ENST00000470537 DIEXFQ68CQ4 756 aaKnown RBP10.16□□□□□ -0.78
XRN1-208ENST00000470537 CWC27Q6UX04 472 aaKnown RBP10.16□□□□□ -0.78
XRN1-208ENST00000470537 ZBTB33Q86T24 672 aa10.16□□□□□ -0.78
XRN1-208ENST00000470537 STAG2Q8N3U4 1231 aa10.16□□□□□ -0.78
XRN1-208ENST00000470537 NME8Q8N427 588 aa10.16□□□□□ -0.78
XRN1-208ENST00000470537 KLHL23Q8NBE8 558 aa10.16□□□□□ -0.78
XRN1-208ENST00000470537 PRSS33Q8NF86 280 aa10.16□□□□□ -0.78
XRN1-208ENST00000470537 IL31RAQ8NI17 732 aa10.16□□□□□ -0.78
XRN1-208ENST00000470537 POF1BQ8WVV4 589 aa10.16□□□□□ -0.78
XRN1-208ENST00000470537 NEK1Q96PY6 1258 aa10.16□□□□□ -0.78
XRN1-208ENST00000470537 RIOX1Q9H6W3 641 aa10.16□□□□□ -0.78
XRN1-208ENST00000470537 RC3H2Q9HBD1 1191 aaKnown RBP10.16□□□□□ -0.78
XRN1-208ENST00000470537 RTEL1Q9NZ71 1219 aa10.16□□□□□ -0.78
XRN1-208ENST00000470537 PUF60Q9UHX1 559 aaKnown RBP10.16□□□□□ -0.78
XRN1-208ENST00000470537 MAD2L2Q9UI95 211 aa10.16□□□□□ -0.78
XRN1-208ENST00000470537 USP34Q70CQ2 3546 aa10.16□□□□□ -0.78
XRN1-208ENST00000470537 TTC3P53804 2025 aa10.16□□□□□ -0.78
XRN1-208ENST00000470537 MBLAC1A4D2B0 266 aaPredicted RBP10.15□□□□□ -0.78
XRN1-208ENST00000470537 TULP1O00294 542 aaPredicted RBP10.15□□□□□ -0.78
XRN1-208ENST00000470537 LINC01565O15544 149 aa10.15□□□□□ -0.78
XRN1-208ENST00000470537 ITGB1P05556 798 aa10.15□□□□□ -0.78
XRN1-208ENST00000470537 LINC00271P0C7V0 271 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms