RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-211ENST00000470199 TANC1Q9C0D5 1861 aa20.03■□□□□ 0.8
LMNA-211ENST00000470199 PP2D1A8MPX8 630 aa20.02■□□□□ 0.8
LMNA-211ENST00000470199 MED24O75448 989 aa20.02■□□□□ 0.8
LMNA-211ENST00000470199 SPATA31C1P0DKV0 1188 aa20.02■□□□□ 0.8
LMNA-211ENST00000470199 CLCN3P51790 818 aa20.02■□□□□ 0.8
LMNA-211ENST00000470199 ATP2C1P98194 919 aaPredicted RBP20.02■□□□□ 0.8
LMNA-211ENST00000470199 OTOP2Q7RTS6 562 aa20.02■□□□□ 0.8
LMNA-211ENST00000470199 KIAA0319LQ8IZA0 1049 aa20.02■□□□□ 0.8
LMNA-211ENST00000470199 LRRC71Q8N4P6 559 aa20.02■□□□□ 0.8
LMNA-211ENST00000470199 CXXC1Q9P0U4 656 aaPredicted RBP20.02■□□□□ 0.8
LMNA-211ENST00000470199 CLIC4Q9Y696 253 aa20.02■□□□□ 0.8
LMNA-211ENST00000470199 MYH9P35579 1960 aaKnown RBP20.01■□□□□ 0.79
LMNA-211ENST00000470199 SMIM35A0A1B0GVV1 85 aa20.01■□□□□ 0.79
LMNA-211ENST00000470199 SOX1O00570 391 aaPredicted RBP20.01■□□□□ 0.79
LMNA-211ENST00000470199 FGBP02675 491 aa20.01■□□□□ 0.79
LMNA-211ENST00000470199 CDC25AP30304 524 aa20.01■□□□□ 0.79
LMNA-211ENST00000470199 FXR2P51116 673 aaKnown RBP eCLIP20.01■□□□□ 0.795e-11■■■□□ 16.3
LMNA-211ENST00000470199 DRP2Q13474 957 aa20.01■□□□□ 0.79
LMNA-211ENST00000470199 FAM26DQ5JW98 314 aa20.01■□□□□ 0.79
LMNA-211ENST00000470199 RPAINQ86UA6 219 aa20.01■□□□□ 0.79
LMNA-211ENST00000470199 C4orf19Q8IY42 314 aa20.01■□□□□ 0.79
LMNA-211ENST00000470199 METTL13Q8N6R0 699 aa20.01■□□□□ 0.79
LMNA-211ENST00000470199 LINC01465Q8N7H1 131 aa20.01■□□□□ 0.79
LMNA-211ENST00000470199 PPP1R16BQ96T49 567 aa20.01■□□□□ 0.79
LMNA-211ENST00000470199 ZSWIM4Q9H7M6 989 aa20.01■□□□□ 0.79
LMNA-211ENST00000470199 CDHR5Q9HBB8 845 aa20.01■□□□□ 0.79
LMNA-211ENST00000470199 CDY2AQ9Y6F7 541 aa20.01■□□□□ 0.79
LMNA-211ENST00000470199 CXCL10P02778 98 aa20■□□□□ 0.79
LMNA-211ENST00000470199 YWHABP31946 246 aaKnown RBP20■□□□□ 0.79
LMNA-211ENST00000470199 RFC2P35250 354 aa20■□□□□ 0.79
LMNA-211ENST00000470199 MRPS6P82932 125 aaKnown RBP20■□□□□ 0.79
LMNA-211ENST00000470199 MKRN4PQ13434 485 aaPredicted RBP20■□□□□ 0.79
LMNA-211ENST00000470199 SF3A1Q15459 793 aaKnown RBP20■□□□□ 0.79
LMNA-211ENST00000470199 ECM1Q16610 540 aa20■□□□□ 0.79
LMNA-211ENST00000470199 EFCAB12Q6NXP0 572 aa20■□□□□ 0.79
LMNA-211ENST00000470199 CATSPER3Q86XQ3 398 aa20■□□□□ 0.79
LMNA-211ENST00000470199 RPUSD2Q8IZ73 545 aaKnown RBP20■□□□□ 0.79
LMNA-211ENST00000470199 RNPC3Q96LT9 517 aaKnown RBP20■□□□□ 0.79
LMNA-211ENST00000470199 BMP2KQ9NSY1 1161 aaPredicted RBP20■□□□□ 0.79
LMNA-211ENST00000470199 CEP131Q9UPN4 1083 aa20■□□□□ 0.79
LMNA-211ENST00000470199 KAT6AQ92794 2004 aa20■□□□□ 0.79
LMNA-211ENST00000470199 CAND2O75155 1236 aa19.99■□□□□ 0.79
LMNA-211ENST00000470199 VTNP04004 478 aa19.99■□□□□ 0.79
LMNA-211ENST00000470199 PRPHP41219 470 aa19.99■□□□□ 0.79
LMNA-211ENST00000470199 CEBPZQ03701 1054 aaKnown RBP19.99■□□□□ 0.79
LMNA-211ENST00000470199 GRIN1Q05586 938 aa19.99■□□□□ 0.79
LMNA-211ENST00000470199 TMEM266Q2M3C6 531 aa19.99■□□□□ 0.79
LMNA-211ENST00000470199 FAM109BQ6ICB4 259 aaPredicted RBP19.99■□□□□ 0.79
LMNA-211ENST00000470199 PSRC1Q6PGN9 363 aaPredicted RBP19.99■□□□□ 0.79
LMNA-211ENST00000470199 IGSF22Q8N9C0 903 aa19.99■□□□□ 0.79
LMNA-211ENST00000470199 PIGOQ8TEQ8 1089 aa19.99■□□□□ 0.79
LMNA-211ENST00000470199 ZNF668Q96K58 619 aaPredicted RBP19.99■□□□□ 0.79
LMNA-211ENST00000470199 SUGCTQ9HAC7 445 aa19.99■□□□□ 0.79
LMNA-211ENST00000470199 CYP26B1Q9NR63 512 aa19.99■□□□□ 0.79
LMNA-211ENST00000470199 LRWD1Q9UFC0 647 aa19.99■□□□□ 0.79
LMNA-211ENST00000470199 A0A1W2PPC1 479 aa19.98■□□□□ 0.79
LMNA-211ENST00000470199 LAD1O00515 517 aa19.98■□□□□ 0.79
LMNA-211ENST00000470199 LYPLA2O95372 231 aa19.98■□□□□ 0.79
LMNA-211ENST00000470199 GHRP10912 638 aa19.98■□□□□ 0.79
LMNA-211ENST00000470199 TBC1D8BQ0IIM8 1120 aa19.98■□□□□ 0.79
LMNA-211ENST00000470199 RASIP1Q5U651 963 aa19.98■□□□□ 0.79
LMNA-211ENST00000470199 POTEGQ6S5H5 508 aa19.98■□□□□ 0.79
LMNA-211ENST00000470199 DTHD1Q6ZMT9 781 aa19.98■□□□□ 0.79
LMNA-211ENST00000470199 RSPH3Q86UC2 560 aa19.98■□□□□ 0.79
LMNA-211ENST00000470199 DBF4BQ8NFT6 615 aa19.98■□□□□ 0.79
LMNA-211ENST00000470199 HERVK_113Q902F9 699 aa19.98■□□□□ 0.79
LMNA-211ENST00000470199 CEP170P1Q96L14 293 aa19.98■□□□□ 0.79
LMNA-211ENST00000470199 MMTAG2Q9BU76 263 aaKnown RBP19.98■□□□□ 0.79
LMNA-211ENST00000470199 POLR3CQ9BUI4 534 aaPredicted RBP19.98■□□□□ 0.79
LMNA-211ENST00000470199 TET1Q8NFU7 2136 aa19.97■□□□□ 0.79
LMNA-211ENST00000470199 SIP14410 1827 aa19.97■□□□□ 0.79
LMNA-211ENST00000470199 IGKV6-21A0A0C4DH24 114 aa19.97■□□□□ 0.79
LMNA-211ENST00000470199 VWA3AA6NCI4 1184 aa19.97■□□□□ 0.79
LMNA-211ENST00000470199 GRXCR1A8MXD5 290 aa19.97■□□□□ 0.79
LMNA-211ENST00000470199 MAGEB2O15479 319 aa19.97■□□□□ 0.79
LMNA-211ENST00000470199 DKC1O60832 514 aaKnown RBP eCLIP19.97■□□□□ 0.79
LMNA-211ENST00000470199 ZSCAN22P10073 491 aaPredicted RBP19.97■□□□□ 0.79
LMNA-211ENST00000470199 PDIA5Q14554 519 aa19.97■□□□□ 0.79
LMNA-211ENST00000470199 LPIN1Q14693 890 aa19.97■□□□□ 0.79
LMNA-211ENST00000470199 PTPAQ15257 358 aa19.97■□□□□ 0.79
LMNA-211ENST00000470199 FOXD4L6Q3SYB3 417 aaPredicted RBP19.97■□□□□ 0.79
LMNA-211ENST00000470199 XKR9Q5GH70 373 aa19.97■□□□□ 0.79
LMNA-211ENST00000470199 FOXD4L3Q6VB84 417 aaPredicted RBP19.97■□□□□ 0.79
LMNA-211ENST00000470199 NEK9Q8TD19 979 aa19.97■□□□□ 0.79
LMNA-211ENST00000470199 USP28Q96RU2 1077 aa19.97■□□□□ 0.79
LMNA-211ENST00000470199 CELF4Q9BZC1 486 aaKnown RBP19.97■□□□□ 0.79
LMNA-211ENST00000470199 TUFT1Q9NNX1 390 aa19.97■□□□□ 0.79
LMNA-211ENST00000470199 TRPV2Q9Y5S1 764 aa19.97■□□□□ 0.79
LMNA-211ENST00000470199 MAFO75444 373 aaPredicted RBP19.96■□□□□ 0.79
LMNA-211ENST00000470199 PFKMP08237 780 aa19.96■□□□□ 0.79
LMNA-211ENST00000470199 RPA1P27694 616 aa19.96■□□□□ 0.79
LMNA-211ENST00000470199 CCT6AP40227 531 aaKnown RBP19.96■□□□□ 0.79
LMNA-211ENST00000470199 KIZQ2M2Z5 673 aa19.96■□□□□ 0.79
LMNA-211ENST00000470199 PLEKHG4Q58EX7 1191 aa19.96■□□□□ 0.79
LMNA-211ENST00000470199 FBXO47Q5MNV8 452 aa19.96■□□□□ 0.79
LMNA-211ENST00000470199 LRCH3Q96II8 777 aa19.96■□□□□ 0.79
LMNA-211ENST00000470199 ZSCAN16Q9H4T2 348 aaPredicted RBP19.96■□□□□ 0.79
LMNA-211ENST00000470199 AGO3Q9H9G7 860 aaKnown RBP19.96■□□□□ 0.79
LMNA-211ENST00000470199 GINS2Q9Y248 185 aa19.96■□□□□ 0.79
LMNA-211ENST00000470199 ZDHHC9Q9Y397 364 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms