RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 ATMINO43313 823 aaPredicted RBP10.46□□□□□ -0.73
CCDC171-204ENST00000470191 RPS6KA5O75582 802 aa10.46□□□□□ -0.73
CCDC171-204ENST00000470191 ITGB5P18084 799 aa10.46□□□□□ -0.73
CCDC171-204ENST00000470191 UBE3AQ05086 875 aa10.46□□□□□ -0.73
CCDC171-204ENST00000470191 MTMR1Q13613 665 aa10.46□□□□□ -0.73
CCDC171-204ENST00000470191 PLCB4Q15147 1175 aa10.46□□□□□ -0.73
CCDC171-204ENST00000470191 TICAM2Q86XR7 235 aa10.46□□□□□ -0.73
CCDC171-204ENST00000470191 CMTR1Q8N1G2 835 aaKnown RBP10.46□□□□□ -0.73
CCDC171-204ENST00000470191 GPRASP2Q96D09 838 aa10.46□□□□□ -0.73
CCDC171-204ENST00000470191 RRP36Q96EU6 259 aaKnown RBP10.46□□□□□ -0.73
CCDC171-204ENST00000470191 CDCA3Q99618 268 aaPredicted RBP10.46□□□□□ -0.73
CCDC171-204ENST00000470191 TCF25Q9BQ70 676 aa10.46□□□□□ -0.73
CCDC171-204ENST00000470191 IL25Q9H293 177 aa10.46□□□□□ -0.73
CCDC171-204ENST00000470191 POMKQ9H5K3 350 aa10.46□□□□□ -0.73
CCDC171-204ENST00000470191 AZI2Q9H6S1 392 aa10.46□□□□□ -0.73
CCDC171-204ENST00000470191 SORCS3Q9UPU3 1222 aa10.46□□□□□ -0.73
CCDC171-204ENST00000470191 NOC2LQ9Y3T9 749 aaKnown RBP10.46□□□□□ -0.73
CCDC171-204ENST00000470191 NR2E1Q9Y466 385 aa10.46□□□□□ -0.73
CCDC171-204ENST00000470191 hCG_1642624A0A1W2PR95 340 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 PROB1E7EW31 1015 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 FSCN2O14926 492 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 ID4P47928 161 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 MTMR3Q13615 1198 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 KANK3Q6NY19 840 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 XRRA1Q6P2D8 792 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 MTHFD1LQ6UB35 978 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 TRMT1LQ7Z2T5 733 aaKnown RBP10.45□□□□□ -0.74
CCDC171-204ENST00000470191 TMC7Q7Z402 723 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 CATIPQ7Z7H3 387 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 RALYLQ86SE5 291 aaKnown RBP10.45□□□□□ -0.74
CCDC171-204ENST00000470191 PLEKHM2Q8IWE5 1019 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 ADSSL1Q8N142 457 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 FLCNQ8NFG4 579 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 NKD2Q969F2 451 aaPredicted RBP10.45□□□□□ -0.74
CCDC171-204ENST00000470191 CDHR1Q96JP9 859 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 CWH43Q9H720 699 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 ERVK-5Q9HDB9 667 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 SLC9A2Q9UBY0 812 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 SEC63Q9UGP8 760 aaKnown RBP10.45□□□□□ -0.74
CCDC171-204ENST00000470191 PCDHA2Q9Y5H9 948 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 TAF6LQ9Y6J9 622 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 SQORQ9Y6N5 450 aa10.45□□□□□ -0.74
CCDC171-204ENST00000470191 MYH9P35579 1960 aaKnown RBP10.45□□□□□ -0.74
CCDC171-204ENST00000470191 SMIM35A0A1B0GVV1 85 aa10.44□□□□□ -0.74
CCDC171-204ENST00000470191 DDX39AO00148 427 aaKnown RBP10.44□□□□□ -0.74
CCDC171-204ENST00000470191 HIP1O00291 1037 aa10.44□□□□□ -0.74
CCDC171-204ENST00000470191 LAG3P18627 525 aa10.44□□□□□ -0.74
CCDC171-204ENST00000470191 KLRC1P26715 233 aa10.44□□□□□ -0.74
CCDC171-204ENST00000470191 NBL1P41271 181 aa10.44□□□□□ -0.74
CCDC171-204ENST00000470191 TROAPQ12815 778 aa10.44□□□□□ -0.74
CCDC171-204ENST00000470191 RARS2Q5T160 578 aaKnown RBP10.44□□□□□ -0.74
CCDC171-204ENST00000470191 CES5AQ6NT32 575 aa10.44□□□□□ -0.74
CCDC171-204ENST00000470191 RAB11FIP4Q86YS3 637 aa10.44□□□□□ -0.74
CCDC171-204ENST00000470191 CCDC82Q8N4S0 544 aa10.44□□□□□ -0.74
CCDC171-204ENST00000470191 C12orf76Q8N812 135 aaPredicted RBP10.44□□□□□ -0.74
CCDC171-204ENST00000470191 RNF169Q8NCN4 708 aa10.44□□□□□ -0.74
CCDC171-204ENST00000470191 TMEM40Q8WWA1 233 aa10.44□□□□□ -0.74
CCDC171-204ENST00000470191 MRPS27Q92552 414 aaKnown RBP10.44□□□□□ -0.74
CCDC171-204ENST00000470191 PGBD1Q96JS3 809 aa10.44□□□□□ -0.74
CCDC171-204ENST00000470191 PSTPIP2Q9H939 334 aa10.44□□□□□ -0.74
CCDC171-204ENST00000470191 ATP6V0A4Q9HBG4 840 aa10.44□□□□□ -0.74
CCDC171-204ENST00000470191 JPH1Q9HDC5 661 aaPredicted RBP10.44□□□□□ -0.74
CCDC171-204ENST00000470191 LIMD1Q9UGP4 676 aa10.44□□□□□ -0.74
CCDC171-204ENST00000470191 PUF60Q9UHX1 559 aaKnown RBP10.44□□□□□ -0.74
CCDC171-204ENST00000470191 ST3GAL5Q9UNP4 418 aa10.44□□□□□ -0.74
CCDC171-204ENST00000470191 UBIAD1Q9Y5Z9 338 aa10.44□□□□□ -0.74
CCDC171-204ENST00000470191 SPTBN4Q9H254 2564 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 FSD2A1L4K1 749 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 SPDYE3A6NKU9 549 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 C9IYK1 514 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 PIK3CDO00329 1044 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 PLEKHA8P1O95397 391 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 RPLP2P05387 115 aaKnown RBP10.43□□□□□ -0.74
CCDC171-204ENST00000470191 ARP10275 920 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 RXRAP19793 462 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 PDE4AP27815 886 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 STAT5BP51692 787 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 ACTR2P61160 394 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 HDAC1Q13547 482 aaPredicted RBP10.43□□□□□ -0.74
CCDC171-204ENST00000470191 KCNC3Q14003 757 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 SART3Q15020 963 aaKnown RBP10.43□□□□□ -0.74
CCDC171-204ENST00000470191 KIZQ2M2Z5 673 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 TPRNQ4KMQ1 711 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 PDE12Q6L8Q7 609 aaKnown RBP10.43□□□□□ -0.74
CCDC171-204ENST00000470191 KCNT2Q6UVM3 1135 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 SLC24A5Q71RS6 500 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 CHD1LQ86WJ1 897 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 UBALD2Q8IYN6 164 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 CTCFLQ8NI51 663 aaPredicted RBP10.43□□□□□ -0.74
CCDC171-204ENST00000470191 ZNF558Q96NG5 402 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 OSMRQ99650 979 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 SDF4Q9BRK5 362 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 JADE2Q9NQC1 790 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 RGS18Q9NS28 235 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 PCDHA6Q9UN73 950 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 PCDHA8Q9Y5H6 950 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 C2orf16Q68DN1 1984 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 WDR81Q562E7 1941 aa10.43□□□□□ -0.74
CCDC171-204ENST00000470191 DENND4AQ7Z401 1863 aa10.42□□□□□ -0.74
CCDC171-204ENST00000470191 KDM3AQ9Y4C1 1321 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms